RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 Q8N9W7 124 aa8.3□□□□□ -1.08
CDH3-210ENST00000569117 TEX45Q8NA69 505 aa8.3□□□□□ -1.08
CDH3-210ENST00000569117 OR4A5Q8NH83 315 aa8.3□□□□□ -1.08
CDH3-210ENST00000569117 RNASE11Q8TAA1 199 aaKnown RBP8.3□□□□□ -1.08
CDH3-210ENST00000569117 TMEM167AQ8TBQ9 72 aa8.3□□□□□ -1.08
CDH3-210ENST00000569117 RRNAD1Q96FB5 475 aaKnown RBP8.3□□□□□ -1.08
CDH3-210ENST00000569117 OR2A7Q96R45 310 aa8.3□□□□□ -1.08
CDH3-210ENST00000569117 OR51J1Q9H342 316 aa8.3□□□□□ -1.08
CDH3-210ENST00000569117 FBXL15Q9H469 300 aa8.3□□□□□ -1.08
CDH3-210ENST00000569117 TPSG1Q9NRR2 321 aa8.3□□□□□ -1.08
CDH3-210ENST00000569117 METTL1Q9UBP6 276 aaKnown RBP8.3□□□□□ -1.08
CDH3-210ENST00000569117 SIGLEC9Q9Y336 463 aa8.3□□□□□ -1.08
CDH3-210ENST00000569117 TMED3Q9Y3Q3 217 aa8.3□□□□□ -1.08
CDH3-210ENST00000569117 A0A0G2JRQ6 117 aa8.29□□□□□ -1.08
CDH3-210ENST00000569117 NCBP2LA6PVI3 153 aaKnown RBP8.29□□□□□ -1.08
CDH3-210ENST00000569117 HLA-DRB1P01911 266 aa8.29□□□□□ -1.08
CDH3-210ENST00000569117 AMY1AP04745 511 aa8.29□□□□□ -1.08
CDH3-210ENST00000569117 RNASE1P07998 156 aaKnown RBP8.29□□□□□ -1.08
CDH3-210ENST00000569117 RPL15P61313 204 aaKnown RBP8.29□□□□□ -1.08
CDH3-210ENST00000569117 UBA52P62987 128 aaKnown RBP8.29□□□□□ -1.08
CDH3-210ENST00000569117 PLGLAQ15195 96 aa8.29□□□□□ -1.08
CDH3-210ENST00000569117 PRSS8Q16651 343 aa8.29□□□□□ -1.08
CDH3-210ENST00000569117 MRGPRG-AS1Q2M3A8 158 aa8.29□□□□□ -1.08
CDH3-210ENST00000569117 PPP1R27Q86WC6 154 aa8.29□□□□□ -1.08
CDH3-210ENST00000569117 FOXRED2Q8IWF2 684 aa8.29□□□□□ -1.08
CDH3-210ENST00000569117 TNFRSF19Q9NS68 423 aa8.29□□□□□ -1.08
CDH3-210ENST00000569117 COA4Q9NYJ1 87 aa8.29□□□□□ -1.08
CDH3-210ENST00000569117 TNCP24821 2201 aa8.28□□□□□ -1.08
CDH3-210ENST00000569117 C15orf61A6NNL5 157 aa8.28□□□□□ -1.08
CDH3-210ENST00000569117 UPK2O00526 184 aa8.28□□□□□ -1.08
CDH3-210ENST00000569117 TCF21O43680 179 aa8.28□□□□□ -1.08
CDH3-210ENST00000569117 SSNA1O43805 119 aa8.28□□□□□ -1.08
CDH3-210ENST00000569117 ADAP1O75689 374 aa8.28□□□□□ -1.08
CDH3-210ENST00000569117 IFNA21P01568 189 aa8.28□□□□□ -1.08
CDH3-210ENST00000569117 HOXB5P09067 269 aa8.28□□□□□ -1.08
CDH3-210ENST00000569117 OR9G9P0C7N8 305 aa8.28□□□□□ -1.08
CDH3-210ENST00000569117 SLC25A6P12236 298 aa8.28□□□□□ -1.08
CDH3-210ENST00000569117 HLA-GP17693 338 aa8.28□□□□□ -1.08
CDH3-210ENST00000569117 SSBP2P81877 361 aaPredicted RBP8.28□□□□□ -1.08
CDH3-210ENST00000569117 AARDQ4LEZ3 155 aa8.28□□□□□ -1.08
CDH3-210ENST00000569117 GGNBP1Q5YKI7 109 aa8.28□□□□□ -1.08
CDH3-210ENST00000569117 MMD2Q8IY49 270 aa8.28□□□□□ -1.08
CDH3-210ENST00000569117 OR5M8Q8NGP6 311 aa8.28□□□□□ -1.08
CDH3-210ENST00000569117 DUX5Q96PT3 197 aa8.28□□□□□ -1.08
CDH3-210ENST00000569117 SPIN2AQ99865 258 aa8.28□□□□□ -1.08
CDH3-210ENST00000569117 SPIN2BQ9BPZ2 258 aa8.28□□□□□ -1.08
CDH3-210ENST00000569117 RANBP3Q9H6Z4 567 aaPredicted RBP8.28□□□□□ -1.08
CDH3-210ENST00000569117 ZNF430Q9H8G1 570 aaPredicted RBP8.28□□□□□ -1.08
CDH3-210ENST00000569117 TMEM14BQ9NUH8 114 aa8.28□□□□□ -1.08
CDH3-210ENST00000569117 CACNG5Q9UF02 275 aa8.28□□□□□ -1.08
CDH3-210ENST00000569117 TET2Q6N021 2002 aaPredicted RBP8.28□□□□□ -1.08
CDH3-210ENST00000569117 TRAV3A0A0B4J244 114 aa8.27□□□□□ -1.09
CDH3-210ENST00000569117 A0A1B0GU03 582 aa8.27□□□□□ -1.09
CDH3-210ENST00000569117 MPTX1A8MV57 137 aa8.27□□□□□ -1.09
CDH3-210ENST00000569117 CCSO14618 274 aa8.27□□□□□ -1.09
CDH3-210ENST00000569117 SNAPC5O75971 98 aa8.27□□□□□ -1.09
CDH3-210ENST00000569117 CA2P00918 260 aa8.27□□□□□ -1.09
CDH3-210ENST00000569117 SULT1A3P0DMM9 295 aa8.27□□□□□ -1.09
CDH3-210ENST00000569117 SULT1A4P0DMN0 295 aa8.27□□□□□ -1.09
CDH3-210ENST00000569117 MAS1LP35410 378 aa8.27□□□□□ -1.09
CDH3-210ENST00000569117 OR2B8PP59922 312 aa8.27□□□□□ -1.09
CDH3-210ENST00000569117 RPL8P62917 257 aaKnown RBP8.27□□□□□ -1.09
CDH3-210ENST00000569117 SMCO1Q147U7 214 aa8.27□□□□□ -1.09
CDH3-210ENST00000569117 IZUMO4Q1ZYL8 232 aa8.27□□□□□ -1.09
CDH3-210ENST00000569117 FAM209BQ5JX69 171 aa8.27□□□□□ -1.09
CDH3-210ENST00000569117 ZNF429Q86V71 674 aa8.27□□□□□ -1.09
CDH3-210ENST00000569117 UXS1Q8NBZ7 420 aa8.27□□□□□ -1.09
CDH3-210ENST00000569117 GPR146Q96CH1 333 aa8.27□□□□□ -1.09
CDH3-210ENST00000569117 RASL11BQ9BPW5 248 aa8.27□□□□□ -1.09
CDH3-210ENST00000569117 NPFFR1Q9GZQ6 430 aa8.27□□□□□ -1.09
CDH3-210ENST00000569117 PRNDQ9UKY0 176 aa8.27□□□□□ -1.09
CDH3-210ENST00000569117 FOXA2Q9Y261 457 aaPredicted RBP8.27□□□□□ -1.09
CDH3-210ENST00000569117 PLXNB1O43157 2135 aa8.26□□□□□ -1.09
CDH3-210ENST00000569117 IGHV7-81A0A0B4J1V7 117 aa8.26□□□□□ -1.09
CDH3-210ENST00000569117 TRIM77I1YAP6 450 aa8.26□□□□□ -1.09
CDH3-210ENST00000569117 GOSR2O14653 212 aa8.26□□□□□ -1.09
CDH3-210ENST00000569117 PITX3O75364 302 aa8.26□□□□□ -1.09
CDH3-210ENST00000569117 ACTL6BO94805 426 aa8.26□□□□□ -1.09
CDH3-210ENST00000569117 IGLV1-40P01703 118 aa8.26□□□□□ -1.09
CDH3-210ENST00000569117 COMPP49747 757 aaPredicted RBP8.26□□□□□ -1.09
CDH3-210ENST00000569117 RRAS2P62070 204 aaPredicted RBP8.26□□□□□ -1.09
CDH3-210ENST00000569117 PJVKQ0ZLH3 352 aa8.26□□□□□ -1.09
CDH3-210ENST00000569117 C2orf68Q2NKX9 166 aa8.26□□□□□ -1.09
CDH3-210ENST00000569117 THOC7Q6I9Y2 204 aaKnown RBP8.26□□□□□ -1.09
CDH3-210ENST00000569117 ZNF562Q6V9R5 426 aa8.26□□□□□ -1.09
CDH3-210ENST00000569117 Q6ZRM9 215 aa8.26□□□□□ -1.09
CDH3-210ENST00000569117 OR5B3Q8NH48 314 aa8.26□□□□□ -1.09
CDH3-210ENST00000569117 OR4A16Q8NH70 328 aa8.26□□□□□ -1.09
CDH3-210ENST00000569117 HSPB9Q9BQS6 159 aa8.26□□□□□ -1.09
CDH3-210ENST00000569117 MED28Q9H204 178 aa8.26□□□□□ -1.09
CDH3-210ENST00000569117 MGAT4CQ9UBM8 478 aa8.26□□□□□ -1.09
CDH3-210ENST00000569117 ZNF257Q9Y2Q1 563 aa8.26□□□□□ -1.09
CDH3-210ENST00000569117 NSG2Q9Y328 171 aa8.26□□□□□ -1.09
CDH3-210ENST00000569117 FAM181BA6NEQ2 426 aa8.25□□□□□ -1.09
CDH3-210ENST00000569117 FCN1O00602 326 aa8.25□□□□□ -1.09
CDH3-210ENST00000569117 KCNAB3O43448 404 aa8.25□□□□□ -1.09
CDH3-210ENST00000569117 RBMXL2O75526 392 aaKnown RBP8.25□□□□□ -1.09
CDH3-210ENST00000569117 IGHG2P01859 326 aa8.25□□□□□ -1.09
CDH3-210ENST00000569117 CX3CL1P78423 397 aa8.25□□□□□ -1.09
CDH3-210ENST00000569117 NDPQ00604 133 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms