RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 OR52A1Q9UKL2 312 aa8.57□□□□□ -1.04
CDH3-208ENST00000569036 MEIS3P1A6NDR6 274 aa8.56□□□□□ -1.04
CDH3-208ENST00000569036 OOSP1A8MZH6 123 aa8.56□□□□□ -1.04
CDH3-208ENST00000569036 BUB1B-PAK6H3BSN5 160 aa8.56□□□□□ -1.04
CDH3-208ENST00000569036 CCSO14618 274 aa8.56□□□□□ -1.04
CDH3-208ENST00000569036 IFNA17P01571 189 aa8.56□□□□□ -1.04
CDH3-208ENST00000569036 HLA-DQA2P01906 255 aa8.56□□□□□ -1.04
CDH3-208ENST00000569036 ACKR3P25106 362 aa8.56□□□□□ -1.04
CDH3-208ENST00000569036 HRH1P35367 487 aa8.56□□□□□ -1.04
CDH3-208ENST00000569036 MEF2CQ06413 473 aaPredicted RBP8.56□□□□□ -1.04
CDH3-208ENST00000569036 ATXN7L3Q14CW9 347 aaPredicted RBP8.56□□□□□ -1.04
CDH3-208ENST00000569036 LRRC37A5PQ49AS3 106 aa8.56□□□□□ -1.04
CDH3-208ENST00000569036 RTN4RL2Q86UN3 420 aa8.56□□□□□ -1.04
CDH3-208ENST00000569036 OR5D14Q8NGL3 314 aa8.56□□□□□ -1.04
CDH3-208ENST00000569036 OR4K15Q8NH41 348 aa8.56□□□□□ -1.04
CDH3-208ENST00000569036 RNF133Q8WVZ7 376 aa8.56□□□□□ -1.04
CDH3-208ENST00000569036 TMED6Q8WW62 240 aa8.56□□□□□ -1.04
CDH3-208ENST00000569036 PIGCQ92535 297 aa8.56□□□□□ -1.04
CDH3-208ENST00000569036 HIST1H2BAQ96A08 127 aa8.56□□□□□ -1.04
CDH3-208ENST00000569036 MRGPRFQ96AM1 343 aa8.56□□□□□ -1.04
CDH3-208ENST00000569036 SEC22AQ96IW7 307 aa8.56□□□□□ -1.04
CDH3-208ENST00000569036 KIRREL1Q96J84 757 aa8.56□□□□□ -1.04
CDH3-208ENST00000569036 CMSS1Q9BQ75 279 aaKnown RBP8.56□□□□□ -1.04
CDH3-208ENST00000569036 SULT4A1Q9BR01 284 aa8.56□□□□□ -1.04
CDH3-208ENST00000569036 URM1Q9BTM9 101 aaKnown RBP8.56□□□□□ -1.04
CDH3-208ENST00000569036 KLK15Q9H2R5 256 aa8.56□□□□□ -1.04
CDH3-208ENST00000569036 TAF9BQ9HBM6 251 aa8.56□□□□□ -1.04
CDH3-208ENST00000569036 OR14J1Q9UGF5 321 aa8.56□□□□□ -1.04
CDH3-208ENST00000569036 CACFD1Q9UGQ2 172 aa8.56□□□□□ -1.04
CDH3-208ENST00000569036 DMRT1Q9Y5R6 373 aa8.56□□□□□ -1.04
CDH3-208ENST00000569036 LINC00312Q9Y6C7 94 aa8.56□□□□□ -1.04
CDH3-208ENST00000569036 BORCS7-ASMTA0A0B4J1R7 106 aa8.55□□□□□ -1.04
CDH3-208ENST00000569036 hADV38S2A0JD32 116 aa8.55□□□□□ -1.04
CDH3-208ENST00000569036 PRSS29PA6NIE9 313 aa8.55□□□□□ -1.04
CDH3-208ENST00000569036 LINC01619G3V211 115 aa8.55□□□□□ -1.04
CDH3-208ENST00000569036 MED6O75586 246 aa8.55□□□□□ -1.04
CDH3-208ENST00000569036 HIST1H1DP16402 221 aaKnown RBP8.55□□□□□ -1.04
CDH3-208ENST00000569036 VDAC1P21796 283 aa8.55□□□□□ -1.04
CDH3-208ENST00000569036 KCNJ3P48549 501 aa8.55□□□□□ -1.04
CDH3-208ENST00000569036 GNG3P63215 75 aa8.55□□□□□ -1.04
CDH3-208ENST00000569036 MFGE8Q08431 387 aaPredicted RBP8.55□□□□□ -1.04
CDH3-208ENST00000569036 HLA-DRB5Q30154 266 aa8.55□□□□□ -1.04
CDH3-208ENST00000569036 PRAMEF5Q5TYX0 476 aa8.55□□□□□ -1.04
CDH3-208ENST00000569036 DCXRQ7Z4W1 244 aa8.55□□□□□ -1.04
CDH3-208ENST00000569036 GTSCR1Q86UQ5 136 aa8.55□□□□□ -1.04
CDH3-208ENST00000569036 OR5H2Q8NGV7 314 aa8.55□□□□□ -1.04
CDH3-208ENST00000569036 SELENOIQ9C0D9 397 aa8.55□□□□□ -1.04
CDH3-208ENST00000569036 GSN-AS1Q9NRJ2 163 aa8.55□□□□□ -1.04
CDH3-208ENST00000569036 TMED3Q9Y3Q3 217 aa8.55□□□□□ -1.04
CDH3-208ENST00000569036 LRP1BQ9NZR2 4599 aa8.55□□□□□ -1.04
CDH3-208ENST00000569036 PIGBOS1A0A0B4J2F0 54 aa8.54□□□□□ -1.04
CDH3-208ENST00000569036 ZNF729A6NN14 1252 aaPredicted RBP8.54□□□□□ -1.04
CDH3-208ENST00000569036 ZNF732B4DXR9 585 aa8.54□□□□□ -1.04
CDH3-208ENST00000569036 ZNF737O75373 536 aa8.54□□□□□ -1.04
CDH3-208ENST00000569036 HTR3BO95264 441 aa8.54□□□□□ -1.04
CDH3-208ENST00000569036 IFNA21P01568 189 aa8.54□□□□□ -1.04
CDH3-208ENST00000569036 AKR1C4P17516 323 aa8.54□□□□□ -1.04
CDH3-208ENST00000569036 EDDM3AQ14507 147 aa8.54□□□□□ -1.04
CDH3-208ENST00000569036 RBMY1FQ15415 496 aaKnown RBP8.54□□□□□ -1.04
CDH3-208ENST00000569036 KCTD9Q7L273 389 aa8.54□□□□□ -1.04
CDH3-208ENST00000569036 TPRX1Q8N7U7 411 aa8.54□□□□□ -1.04
CDH3-208ENST00000569036 CASTOR1Q8WTX7 329 aa8.54□□□□□ -1.04
CDH3-208ENST00000569036 AMELYQ99218 206 aa8.54□□□□□ -1.04
CDH3-208ENST00000569036 RSRP1Q9BUV0 290 aa8.54□□□□□ -1.04
CDH3-208ENST00000569036 PLEKHA3Q9HB20 300 aa8.54□□□□□ -1.04
CDH3-208ENST00000569036 ZNF286AQ9HBT8 521 aa8.54□□□□□ -1.04
CDH3-208ENST00000569036 LIN7CQ9NUP9 197 aaKnown RBP8.54□□□□□ -1.04
CDH3-208ENST00000569036 ZNF319Q9P2F9 582 aa8.54□□□□□ -1.04
CDH3-208ENST00000569036 C14orf166Q9Y224 244 aaKnown RBP8.54□□□□□ -1.04
CDH3-208ENST00000569036 SLC22A13Q9Y226 551 aa8.54□□□□□ -1.04
CDH3-208ENST00000569036 IGHV4OR15-8A0A075B7B6 117 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 A0A087WW49 117 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 A0A087WWC5 75 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 C13orf42A0A1B0GVH6 325 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 TMEM269A0A1B0GVZ9 245 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 A0A1W2PPI3 338 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 E5RGE8 158 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 H0YIZ8 118 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 K7EPK0 472 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 SSX5O60225 188 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 NXPH2O95156 264 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 CNIH1O95406 144 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 IGKV1D-33P01593 117 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 IGKV1-33P01594 117 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 IGF1P05019 195 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 H2BFMP0C1H6 154 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 RAB5AP20339 215 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 CCL1P22362 96 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 RAB2AP61019 212 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 SNRPEP62304 92 aaKnown RBP8.53□□□□□ -1.04
CDH3-208ENST00000569036 UNC119Q13432 240 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 RBM39Q14498 530 aaKnown RBP8.53□□□□□ -1.04
CDH3-208ENST00000569036 FAM209BQ5JX69 171 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 OR52W1Q6IF63 320 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 DHRS11Q6UWP2 260 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 TGIF2LXQ8IUE1 241 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.53□□□□□ -1.04
CDH3-208ENST00000569036 BATF2Q8N1L9 274 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 CHST4Q8NCG5 386 aa8.53□□□□□ -1.04
CDH3-208ENST00000569036 OR4D6Q8NGJ1 314 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms