RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-215ENST00000569001 PRAP1Q96NZ9 151 aa0.75□□□□□ -2.29
BBS4-215ENST00000569001 NMNAT3Q96T66 252 aa0.75□□□□□ -2.29
BBS4-215ENST00000569001 TTTY12Q9BZ98 90 aa0.75□□□□□ -2.29
BBS4-215ENST00000569001 UBAP1Q9NZ09 502 aa0.75□□□□□ -2.29
BBS4-215ENST00000569001 MRPL27Q9P0M9 148 aaKnown RBP0.75□□□□□ -2.29
BBS4-215ENST00000569001 VPS29Q9UBQ0 182 aa0.75□□□□□ -2.29
BBS4-215ENST00000569001 HHLA3Q9XRX5 114 aa0.75□□□□□ -2.29
BBS4-215ENST00000569001 V9GYY5 206 aaPredicted RBP0.75□□□□□ -2.29
BBS4-215ENST00000569001 GPR98Q8WXG9 6306 aa0.75□□□□□ -2.29
BBS4-215ENST00000569001 RTEL1-TNFRSF6BF6WH68 1400 aa0.74□□□□□ -2.29
BBS4-215ENST00000569001 ADGRL3Q9HAR2 1447 aa0.74□□□□□ -2.29
BBS4-215ENST00000569001 FLT4P35916 1363 aa0.74□□□□□ -2.29
BBS4-215ENST00000569001 CPAMD8Q8IZJ3 1885 aa0.74□□□□□ -2.29
BBS4-215ENST00000569001 TRAV41A0A0B4J266 112 aa0.74□□□□□ -2.29
BBS4-215ENST00000569001 MDFIC2A0A1B0GVS7 189 aa0.74□□□□□ -2.29
BBS4-215ENST00000569001 VPS37CA5D8V6 355 aaPredicted RBP0.74□□□□□ -2.29
BBS4-215ENST00000569001 TMEM210A6NLX4 147 aa0.74□□□□□ -2.29
BBS4-215ENST00000569001 PSMD12O00232 456 aaPredicted RBP0.74□□□□□ -2.29
BBS4-215ENST00000569001 NOS1APO75052 506 aaPredicted RBP0.74□□□□□ -2.29
BBS4-215ENST00000569001 NSA2O95478 260 aaKnown RBP0.74□□□□□ -2.29
BBS4-215ENST00000569001 TTRP02766 147 aa0.74□□□□□ -2.29
BBS4-215ENST00000569001 MSMBP08118 114 aa0.74□□□□□ -2.29
BBS4-215ENST00000569001 KCNE1P15382 129 aa0.74□□□□□ -2.29
BBS4-215ENST00000569001 TPI1P60174 286 aa0.74□□□□□ -2.29
BBS4-215ENST00000569001 SPCS3P61009 180 aa0.74□□□□□ -2.29
BBS4-215ENST00000569001 HIST1H4AP62805 103 aaKnown RBP0.74□□□□□ -2.29
BBS4-215ENST00000569001 CTAG1AP78358 180 aa0.74□□□□□ -2.29
BBS4-215ENST00000569001 CCL20P78556 96 aa0.74□□□□□ -2.29
BBS4-215ENST00000569001 SRSF6Q13247 344 aaKnown RBP0.74□□□□□ -2.29
BBS4-215ENST00000569001 ITGB3BPQ13352 177 aaPredicted RBP0.74□□□□□ -2.29
BBS4-215ENST00000569001 EDDM3AQ14507 147 aa0.74□□□□□ -2.29
BBS4-215ENST00000569001 GUK1Q16774 197 aa0.74□□□□□ -2.29
BBS4-215ENST00000569001 GLT8D1Q68CQ7 371 aa0.74□□□□□ -2.29
BBS4-215ENST00000569001 KRTAP5-10Q6L8G5 202 aa0.74□□□□□ -2.29
BBS4-215ENST00000569001 TRAPPC5Q8IUR0 188 aa0.74□□□□□ -2.29
BBS4-215ENST00000569001 OR4X1Q8NH49 305 aa0.74□□□□□ -2.29
BBS4-215ENST00000569001 MRPL30Q8TCC3 161 aaKnown RBP0.74□□□□□ -2.29
BBS4-215ENST00000569001 ANKRD7Q92527 254 aa0.74□□□□□ -2.29
BBS4-215ENST00000569001 FGF13Q92913 245 aa0.74□□□□□ -2.29
BBS4-215ENST00000569001 CCDC42Q96M95 316 aa0.74□□□□□ -2.29
BBS4-215ENST00000569001 TSPAN32Q96QS1 320 aa0.74□□□□□ -2.29
BBS4-215ENST00000569001 TXNDC17Q9BRA2 123 aa0.74□□□□□ -2.29
BBS4-215ENST00000569001 TTTY13Q9BZ97 58 aa0.74□□□□□ -2.29
BBS4-215ENST00000569001 C20orf27Q9GZN8 174 aa0.74□□□□□ -2.29
BBS4-215ENST00000569001 TLNRD1Q9H1K6 362 aa0.74□□□□□ -2.29
BBS4-215ENST00000569001 OR51V1Q9H2C8 321 aa0.74□□□□□ -2.29
BBS4-215ENST00000569001 CXorf21Q9HAI6 301 aa0.74□□□□□ -2.29
BBS4-215ENST00000569001 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.74□□□□□ -2.29
BBS4-215ENST00000569001 RBM7Q9Y580 266 aaKnown RBP0.74□□□□□ -2.29
BBS4-215ENST00000569001 MAST2Q6P0Q8 1798 aa0.74□□□□□ -2.29
BBS4-215ENST00000569001 NUMA1Q14980 2115 aa0.74□□□□□ -2.29
BBS4-215ENST00000569001 PTPRBP23467 1997 aa0.74□□□□□ -2.29
BBS4-215ENST00000569001 NCKAP5O14513 1909 aa0.74□□□□□ -2.29
BBS4-215ENST00000569001 SCAF11Q99590 1463 aaKnown RBP0.73□□□□□ -2.29
BBS4-215ENST00000569001 WRNQ14191 1432 aaPredicted RBP eCLIP0.73□□□□□ -2.29
BBS4-215ENST00000569001 ZFHX2Q9C0A1 2572 aaPredicted RBP0.73□□□□□ -2.29
BBS4-215ENST00000569001 STRCQ7RTU9 1775 aa0.73□□□□□ -2.29
BBS4-215ENST00000569001 MTUS2Q5JR59 1369 aa0.73□□□□□ -2.29
BBS4-215ENST00000569001 FN1P02751 2386 aaKnown RBP0.73□□□□□ -2.29
BBS4-215ENST00000569001 TRAV7A0A075B6U4 112 aa0.73□□□□□ -2.29
BBS4-215ENST00000569001 A0A0G2JQZ4 141 aa0.73□□□□□ -2.29
BBS4-215ENST00000569001 ARRDC5A6NEK1 342 aa0.73□□□□□ -2.29
BBS4-215ENST00000569001 H3BRN7 92 aa0.73□□□□□ -2.29
BBS4-215ENST00000569001 C19orf84I3L1E1 186 aa0.73□□□□□ -2.29
BBS4-215ENST00000569001 TXNDC9O14530 226 aa0.73□□□□□ -2.29
BBS4-215ENST00000569001 LEPROTO15243 131 aa0.73□□□□□ -2.29
BBS4-215ENST00000569001 FADS1O60427 444 aa0.73□□□□□ -2.29
BBS4-215ENST00000569001 NAPSAO96009 420 aa0.73□□□□□ -2.29
BBS4-215ENST00000569001 BPGMP07738 259 aa0.73□□□□□ -2.29
BBS4-215ENST00000569001 RPS17P08708 135 aaKnown RBP0.73□□□□□ -2.29
BBS4-215ENST00000569001 LGALS1P09382 135 aaKnown RBP0.73□□□□□ -2.29
BBS4-215ENST00000569001 P0DMU3 169 aa0.73□□□□□ -2.29
BBS4-215ENST00000569001 FAM231AP0DMU4 169 aa0.73□□□□□ -2.29
BBS4-215ENST00000569001 FAM231CP0DMU5 169 aa0.73□□□□□ -2.29
BBS4-215ENST00000569001 NFYAP23511 347 aaPredicted RBP0.73□□□□□ -2.29
BBS4-215ENST00000569001 G6PCP35575 357 aa0.73□□□□□ -2.29
BBS4-215ENST00000569001 CDK9P50750 372 aaKnown RBP0.73□□□□□ -2.29
BBS4-215ENST00000569001 RAB13P51153 203 aa0.73□□□□□ -2.29
BBS4-215ENST00000569001 OR4D2P58180 307 aa0.73□□□□□ -2.29
BBS4-215ENST00000569001 AP3S2P59780 193 aa0.73□□□□□ -2.29
BBS4-215ENST00000569001 SNRPD2P62316 118 aaKnown RBP0.73□□□□□ -2.29
BBS4-215ENST00000569001 HIST1H3AP68431 136 aa0.73□□□□□ -2.29
BBS4-215ENST00000569001 H3F3AP84243 136 aa0.73□□□□□ -2.29
BBS4-215ENST00000569001 AESQ08117 197 aa0.73□□□□□ -2.29
BBS4-215ENST00000569001 IAH1Q2TAA2 248 aaPredicted RBP0.73□□□□□ -2.29
BBS4-215ENST00000569001 ZNF791Q3KP31 576 aaPredicted RBP0.73□□□□□ -2.29
BBS4-215ENST00000569001 IBA57Q5T440 356 aaKnown RBP0.73□□□□□ -2.29
BBS4-215ENST00000569001 TMEM42Q69YG0 159 aa0.73□□□□□ -2.29
BBS4-215ENST00000569001 C8orf74Q6P047 294 aa0.73□□□□□ -2.29
BBS4-215ENST00000569001 Q6ZS49 121 aa0.73□□□□□ -2.29
BBS4-215ENST00000569001 SLC35E3Q7Z769 313 aa0.73□□□□□ -2.29
BBS4-215ENST00000569001 RPP25LQ8N5L8 163 aaKnown RBP0.73□□□□□ -2.29
BBS4-215ENST00000569001 OR13C4Q8NGS5 318 aa0.73□□□□□ -2.29
BBS4-215ENST00000569001 DCANP1Q8TF63 244 aa0.73□□□□□ -2.29
BBS4-215ENST00000569001 SLC7A6Q92536 515 aa0.73□□□□□ -2.29
BBS4-215ENST00000569001 BORCS7Q96B45 105 aa0.73□□□□□ -2.29
BBS4-215ENST00000569001 CHST6Q9GZX3 395 aa0.73□□□□□ -2.29
BBS4-215ENST00000569001 RNF122Q9H9V4 155 aa0.73□□□□□ -2.29
BBS4-215ENST00000569001 EFCAB1Q9HAE3 211 aa0.73□□□□□ -2.29
BBS4-215ENST00000569001 PRTFDC1Q9NRG1 225 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms