RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 NDUFB8O95169 186 aa7.29□□□□□ -1.24
SF3B3-211ENST00000568291 HPRT1P00492 218 aa7.29□□□□□ -1.24
SF3B3-211ENST00000568291 HLA-AP01891 365 aaKnown RBP7.29□□□□□ -1.24
SF3B3-211ENST00000568291 NHLRC4P0CG21 123 aaPredicted RBP7.29□□□□□ -1.24
SF3B3-211ENST00000568291 PGAM2P15259 253 aa7.29□□□□□ -1.24
SF3B3-211ENST00000568291 HLA-GP17693 338 aa7.29□□□□□ -1.24
SF3B3-211ENST00000568291 KIR2DS2P43631 304 aa7.29□□□□□ -1.24
SF3B3-211ENST00000568291 PPP5CP53041 499 aa7.29□□□□□ -1.24
SF3B3-211ENST00000568291 RPL8P62917 257 aaKnown RBP7.29□□□□□ -1.24
SF3B3-211ENST00000568291 MSMO1Q15800 293 aa7.29□□□□□ -1.24
SF3B3-211ENST00000568291 IZUMO4Q1ZYL8 232 aa7.29□□□□□ -1.24
SF3B3-211ENST00000568291 C9orf66Q5T8R8 295 aa7.29□□□□□ -1.24
SF3B3-211ENST00000568291 TBC1D26Q86UD7 250 aa7.29□□□□□ -1.24
SF3B3-211ENST00000568291 TTC9CQ8N5M4 171 aa7.29□□□□□ -1.24
SF3B3-211ENST00000568291 DGCR14Q96DF8 476 aaKnown RBP7.29□□□□□ -1.24
SF3B3-211ENST00000568291 SPIN2AQ99865 258 aa7.29□□□□□ -1.24
SF3B3-211ENST00000568291 SPIN2BQ9BPZ2 258 aa7.29□□□□□ -1.24
SF3B3-211ENST00000568291 RSRP1Q9BUV0 290 aa7.29□□□□□ -1.24
SF3B3-211ENST00000568291 HINT2Q9BX68 163 aa7.29□□□□□ -1.24
SF3B3-211ENST00000568291 SLIRPQ9GZT3 109 aaKnown RBP7.29□□□□□ -1.24
SF3B3-211ENST00000568291 ZC4H2Q9NQZ6 224 aa7.29□□□□□ -1.24
SF3B3-211ENST00000568291 MTFP1Q9UDX5 166 aa7.29□□□□□ -1.24
SF3B3-211ENST00000568291 DPPA5A6NC42 116 aa7.28□□□□□ -1.24
SF3B3-211ENST00000568291 DBX1A6NMT0 343 aa7.28□□□□□ -1.24
SF3B3-211ENST00000568291 PPP5D1E7EU14 171 aa7.28□□□□□ -1.24
SF3B3-211ENST00000568291 LY86O95711 162 aa7.28□□□□□ -1.24
SF3B3-211ENST00000568291 IGKV1-39P01597 117 aa7.28□□□□□ -1.24
SF3B3-211ENST00000568291 IGKV1D-39P04432 117 aa7.28□□□□□ -1.24
SF3B3-211ENST00000568291 IFNA6P05013 189 aa7.28□□□□□ -1.24
SF3B3-211ENST00000568291 ZNF735P0CB33 412 aa7.28□□□□□ -1.24
SF3B3-211ENST00000568291 NQO2P16083 231 aa7.28□□□□□ -1.24
SF3B3-211ENST00000568291 EDN2P20800 178 aa7.28□□□□□ -1.24
SF3B3-211ENST00000568291 F2RP25116 425 aa7.28□□□□□ -1.24
SF3B3-211ENST00000568291 TNFSF8P32971 234 aa7.28□□□□□ -1.24
SF3B3-211ENST00000568291 SYNJ2BPP57105 145 aa7.28□□□□□ -1.24
SF3B3-211ENST00000568291 TAS2R31P59538 309 aa7.28□□□□□ -1.24
SF3B3-211ENST00000568291 OR2B8PP59922 312 aa7.28□□□□□ -1.24
SF3B3-211ENST00000568291 ATP5G2Q06055 141 aa7.28□□□□□ -1.24
SF3B3-211ENST00000568291 IL18Q14116 193 aa7.28□□□□□ -1.24
SF3B3-211ENST00000568291 SP6Q3SY56 376 aa7.28□□□□□ -1.24
SF3B3-211ENST00000568291 SCGB2B2Q4G0G5 96 aa7.28□□□□□ -1.24
SF3B3-211ENST00000568291 RNASE10Q5GAN6 216 aaKnown RBP7.28□□□□□ -1.24
SF3B3-211ENST00000568291 CMTM1Q8IZ96 169 aa7.28□□□□□ -1.24
SF3B3-211ENST00000568291 VSTM2AQ8TAG5 236 aa7.28□□□□□ -1.24
SF3B3-211ENST00000568291 TMEM68Q96MH6 324 aa7.28□□□□□ -1.24
SF3B3-211ENST00000568291 PLEKHA2Q9HB19 425 aa7.28□□□□□ -1.24
SF3B3-211ENST00000568291 SLC2A9Q9NRM0 540 aa7.28□□□□□ -1.24
SF3B3-211ENST00000568291 PEF1Q9UBV8 284 aaKnown RBP7.28□□□□□ -1.24
SF3B3-211ENST00000568291 FBXL7Q9UJT9 491 aa7.28□□□□□ -1.24
SF3B3-211ENST00000568291 IGHV3-21A0A0B4J1V1 117 aa7.27□□□□□ -1.25
SF3B3-211ENST00000568291 A0A0G2JLM5 398 aa7.27□□□□□ -1.25
SF3B3-211ENST00000568291 TEX50A0A1B0GTY4 177 aa7.27□□□□□ -1.25
SF3B3-211ENST00000568291 MARCH11A6NNE9 402 aa7.27□□□□□ -1.25
SF3B3-211ENST00000568291 H3BUA1 57 aa7.27□□□□□ -1.25
SF3B3-211ENST00000568291 RBFOX2O43251 390 aaKnown RBP eCLIP7.27□□□□□ -1.25
SF3B3-211ENST00000568291 CREBL2O60519 120 aaPredicted RBP7.27□□□□□ -1.25
SF3B3-211ENST00000568291 NOL3O60936 208 aaKnown RBP7.27□□□□□ -1.25
SF3B3-211ENST00000568291 RAB3DO95716 219 aa7.27□□□□□ -1.25
SF3B3-211ENST00000568291 PSMB6P28072 239 aa7.27□□□□□ -1.25
SF3B3-211ENST00000568291 EXOSC2Q13868 293 aaKnown RBP7.27□□□□□ -1.25
SF3B3-211ENST00000568291 C15orf32Q32M92 178 aa7.27□□□□□ -1.25
SF3B3-211ENST00000568291 LCE2AQ5TA79 106 aaPredicted RBP7.27□□□□□ -1.25
SF3B3-211ENST00000568291 STEAP1BQ6NZ63 245 aa7.27□□□□□ -1.25
SF3B3-211ENST00000568291 ZNF343Q6P1L6 599 aa7.27□□□□□ -1.25
SF3B3-211ENST00000568291 MCFD2Q8NI22 146 aa7.27□□□□□ -1.25
SF3B3-211ENST00000568291 MARCH1Q8TCQ1 289 aa7.27□□□□□ -1.25
SF3B3-211ENST00000568291 MRGPRFQ96AM1 343 aa7.27□□□□□ -1.25
SF3B3-211ENST00000568291 FANCD2OSQ96PS1 177 aa7.27□□□□□ -1.25
SF3B3-211ENST00000568291 ASCL2Q99929 193 aa7.27□□□□□ -1.25
SF3B3-211ENST00000568291 RANGRFQ9HD47 186 aaPredicted RBP7.27□□□□□ -1.25
SF3B3-211ENST00000568291 BET1LQ9NYM9 111 aa7.27□□□□□ -1.25
SF3B3-211ENST00000568291 CCDC59Q9P031 241 aaKnown RBP7.27□□□□□ -1.25
SF3B3-211ENST00000568291 LSM4Q9Y4Z0 139 aaKnown RBP7.27□□□□□ -1.25
SF3B3-211ENST00000568291 DMRT1Q9Y5R6 373 aa7.27□□□□□ -1.25
SF3B3-211ENST00000568291 TRBV9A0A0B4J1U6 114 aa7.26□□□□□ -1.25
SF3B3-211ENST00000568291 IGLC7A0M8Q6 106 aa7.26□□□□□ -1.25
SF3B3-211ENST00000568291 GABARAPH6UMI1 98 aa7.26□□□□□ -1.25
SF3B3-211ENST00000568291 BMPR1BO00238 502 aa7.26□□□□□ -1.25
SF3B3-211ENST00000568291 OR2C1O95371 312 aa7.26□□□□□ -1.25
SF3B3-211ENST00000568291 OR13C7P0DN81 318 aa7.26□□□□□ -1.25
SF3B3-211ENST00000568291 DEFA4P12838 97 aa7.26□□□□□ -1.25
SF3B3-211ENST00000568291 SPNP16150 400 aa7.26□□□□□ -1.25
SF3B3-211ENST00000568291 MAS1LP35410 378 aa7.26□□□□□ -1.25
SF3B3-211ENST00000568291 PIGPP57054 158 aa7.26□□□□□ -1.25
SF3B3-211ENST00000568291 ERVK-16P61578 105 aa7.26□□□□□ -1.25
SF3B3-211ENST00000568291 KLF5Q13887 457 aaPredicted RBP7.26□□□□□ -1.25
SF3B3-211ENST00000568291 SPINK9Q5DT21 86 aa7.26□□□□□ -1.25
SF3B3-211ENST00000568291 ACSM6Q6P461 480 aa7.26□□□□□ -1.25
SF3B3-211ENST00000568291 CLEC19AQ6UXS0 136 aa7.26□□□□□ -1.25
SF3B3-211ENST00000568291 IL34Q6ZMJ4 242 aa7.26□□□□□ -1.25
SF3B3-211ENST00000568291 LHFPL1Q86WI0 220 aa7.26□□□□□ -1.25
SF3B3-211ENST00000568291 SLC38A6Q8IZM9 456 aa7.26□□□□□ -1.25
SF3B3-211ENST00000568291 TMEM229BQ8NBD8 167 aa7.26□□□□□ -1.25
SF3B3-211ENST00000568291 OR13C8Q8NGS7 320 aa7.26□□□□□ -1.25
SF3B3-211ENST00000568291 OR4A5Q8NH83 315 aa7.26□□□□□ -1.25
SF3B3-211ENST00000568291 CD300LFQ8TDQ1 290 aa7.26□□□□□ -1.25
SF3B3-211ENST00000568291 USMG5Q96IX5 58 aa7.26□□□□□ -1.25
SF3B3-211ENST00000568291 OR4C12Q96R67 309 aa7.26□□□□□ -1.25
SF3B3-211ENST00000568291 TP53RKQ96S44 253 aa7.26□□□□□ -1.25
SF3B3-211ENST00000568291 COMMD5Q9GZQ3 224 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms