RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 IGHV1-3A0A0C4DH29 117 aa5.72□□□□□ -1.49
SMG1-215ENST00000568239 UPK2O00526 184 aa5.72□□□□□ -1.49
SMG1-215ENST00000568239 KBTBD11O94819 623 aa5.72□□□□□ -1.49
SMG1-215ENST00000568239 RBP4P02753 201 aa5.72□□□□□ -1.49
SMG1-215ENST00000568239 FGF2P09038 288 aa5.72□□□□□ -1.49
SMG1-215ENST00000568239 COL8A1P27658 744 aa5.72□□□□□ -1.49
SMG1-215ENST00000568239 MC5RP33032 325 aa5.72□□□□□ -1.49
SMG1-215ENST00000568239 ARHGDIBP52566 201 aa5.72□□□□□ -1.49
SMG1-215ENST00000568239 RPP30P78346 268 aaKnown RBP5.72□□□□□ -1.49
SMG1-215ENST00000568239 BLOC1S1P78537 153 aa5.72□□□□□ -1.49
SMG1-215ENST00000568239 C21orf62-AS1Q17RA5 79 aa5.72□□□□□ -1.49
SMG1-215ENST00000568239 AKR1C8PQ5T2L2 129 aa5.72□□□□□ -1.49
SMG1-215ENST00000568239 FAM71F2Q6NXP2 309 aa5.72□□□□□ -1.49
SMG1-215ENST00000568239 ZNF429Q86V71 674 aa5.72□□□□□ -1.49
SMG1-215ENST00000568239 BEND2Q8NDZ0 799 aa5.72□□□□□ -1.49
SMG1-215ENST00000568239 FAM168AQ92567 244 aa5.72□□□□□ -1.49
SMG1-215ENST00000568239 MARC2Q969Z3 335 aa5.72□□□□□ -1.49
SMG1-215ENST00000568239 GNPNAT1Q96EK6 184 aaPredicted RBP5.72□□□□□ -1.49
SMG1-215ENST00000568239 RITA1Q96K30 269 aa5.72□□□□□ -1.49
SMG1-215ENST00000568239 REG4Q9BYZ8 158 aa5.72□□□□□ -1.49
SMG1-215ENST00000568239 PLEKHA3Q9HB20 300 aa5.72□□□□□ -1.49
SMG1-215ENST00000568239 AMMECR1Q9Y4X0 333 aaPredicted RBP5.72□□□□□ -1.49
SMG1-215ENST00000568239 RRHO14718 337 aa5.72□□□□□ -1.49
SMG1-215ENST00000568239 HTR1DP28221 377 aa5.72□□□□□ -1.49
SMG1-215ENST00000568239 ZNF137PP52743 207 aa5.72□□□□□ -1.49
SMG1-215ENST00000568239 RPL8P62917 257 aaKnown RBP5.72□□□□□ -1.49
SMG1-215ENST00000568239 ETV3LQ6ZN32 361 aa5.72□□□□□ -1.49
SMG1-215ENST00000568239 VMO1Q7Z5L0 202 aa5.72□□□□□ -1.49
SMG1-215ENST00000568239 OR52E5Q8NH55 327 aa5.72□□□□□ -1.49
SMG1-215ENST00000568239 PINX1Q96BK5 328 aaKnown RBP5.72□□□□□ -1.49
SMG1-215ENST00000568239 SAT2Q96F10 170 aaPredicted RBP5.72□□□□□ -1.49
SMG1-215ENST00000568239 TMEM231Q9H6L2 316 aa5.72□□□□□ -1.49
SMG1-215ENST00000568239 TMEM14BQ9NUH8 114 aa5.72□□□□□ -1.49
SMG1-215ENST00000568239 CACFD1Q9UGQ2 172 aa5.72□□□□□ -1.49
SMG1-215ENST00000568239 FOXA2Q9Y261 457 aaPredicted RBP5.72□□□□□ -1.49
SMG1-215ENST00000568239 C15orf62A8K5M9 175 aa5.71□□□□□ -1.49
SMG1-215ENST00000568239 M0R1W7 72 aa5.71□□□□□ -1.49
SMG1-215ENST00000568239 ACTL6BO94805 426 aa5.71□□□□□ -1.49
SMG1-215ENST00000568239 TSPAN15O95858 294 aa5.71□□□□□ -1.49
SMG1-215ENST00000568239 PRTN3P24158 256 aa5.71□□□□□ -1.49
SMG1-215ENST00000568239 CD24P25063 80 aa5.71□□□□□ -1.49
SMG1-215ENST00000568239 F2RL1P55085 397 aa5.71□□□□□ -1.49
SMG1-215ENST00000568239 LGALS4P56470 323 aa5.71□□□□□ -1.49
SMG1-215ENST00000568239 SSX2Q16385 188 aa5.71□□□□□ -1.49
SMG1-215ENST00000568239 POU2AF1Q16633 256 aa5.71□□□□□ -1.49
SMG1-215ENST00000568239 VMA21Q3ZAQ7 101 aa5.71□□□□□ -1.49
SMG1-215ENST00000568239 TMEM177Q53S58 311 aa5.71□□□□□ -1.49
SMG1-215ENST00000568239 CLEC2AQ6UVW9 174 aa5.71□□□□□ -1.49
SMG1-215ENST00000568239 LHFPL4Q7Z7J7 247 aa5.71□□□□□ -1.49
SMG1-215ENST00000568239 VSTM2AQ8TAG5 236 aa5.71□□□□□ -1.49
SMG1-215ENST00000568239 PIMREGQ9BSJ6 248 aa5.71□□□□□ -1.49
SMG1-215ENST00000568239 UQCC1Q9NVA1 299 aa5.71□□□□□ -1.49
SMG1-215ENST00000568239 MED9Q9NWA0 146 aa5.71□□□□□ -1.49
SMG1-215ENST00000568239 BET1LQ9NYM9 111 aa5.71□□□□□ -1.49
SMG1-215ENST00000568239 CELSR2Q9HCU4 2923 aa5.71□□□□□ -1.5
SMG1-215ENST00000568239 TEX50A0A1B0GTY4 177 aa5.71□□□□□ -1.5
SMG1-215ENST00000568239 GOSR1O95249 250 aa5.71□□□□□ -1.5
SMG1-215ENST00000568239 CNTFRP26992 372 aa5.71□□□□□ -1.5
SMG1-215ENST00000568239 VDAC2P45880 294 aaPredicted RBP5.71□□□□□ -1.5
SMG1-215ENST00000568239 ELLP55199 621 aaPredicted RBP5.71□□□□□ -1.5
SMG1-215ENST00000568239 RAB11AP62491 216 aa5.71□□□□□ -1.5
SMG1-215ENST00000568239 C10orf55Q5SWW7 151 aa5.71□□□□□ -1.5
SMG1-215ENST00000568239 HSD17B13Q7Z5P4 300 aaPredicted RBP5.71□□□□□ -1.5
SMG1-215ENST00000568239 SLC24A4Q8NFF2 622 aa5.71□□□□□ -1.5
SMG1-215ENST00000568239 OR10W1Q8NGF6 305 aa5.71□□□□□ -1.5
SMG1-215ENST00000568239 WDR61Q9GZS3 305 aaKnown RBP5.71□□□□□ -1.5
SMG1-215ENST00000568239 TREM1Q9NP99 234 aa5.71□□□□□ -1.5
SMG1-215ENST00000568239 PARP11Q9NR21 331 aa5.71□□□□□ -1.5
SMG1-215ENST00000568239 TPSG1Q9NRR2 321 aa5.71□□□□□ -1.5
SMG1-215ENST00000568239 FKBP11Q9NYL4 201 aa5.71□□□□□ -1.5
SMG1-215ENST00000568239 DPM3Q9P2X0 92 aa5.71□□□□□ -1.5
SMG1-215ENST00000568239 TOX4O94842 621 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 APELAP0DMC3 54 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 FGF7P21781 194 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 USF1P22415 310 aaPredicted RBP5.7□□□□□ -1.5
SMG1-215ENST00000568239 NPY1RP25929 384 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 SNCAP37840 140 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 RAB5CP51148 216 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 LMO4P61968 165 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 GNB1P62873 340 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 PJVKQ0ZLH3 352 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 HES1Q14469 280 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 PLGLAQ15195 96 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 LRRC75BQ2VPJ9 315 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 LDLRAD2Q5SZI1 272 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 TAF15Q92804 592 aaKnown RBP eCLIP5.7□□□□□ -1.5
SMG1-215ENST00000568239 LINC00052Q96N35 136 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 TMEM147Q9BVK8 224 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 ZNF430Q9H8G1 570 aaPredicted RBP5.7□□□□□ -1.5
SMG1-215ENST00000568239 PMS2P5A8MQ11 134 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 UMAD1C9J7I0 102 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 TIMM23O14925 209 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 CA2P00918 260 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 CEACAM3P40198 252 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 LGALS7P47929 136 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 PRCDQ00LT1 54 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 AARDQ4LEZ3 155 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 PUSL1Q8N0Z8 303 aaKnown RBP5.7□□□□□ -1.5
SMG1-215ENST00000568239 STPG2Q8N412 459 aa5.7□□□□□ -1.5
SMG1-215ENST00000568239 OR5B3Q8NH48 314 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms