RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 LIN7CQ9NUP9 197 aaKnown RBP4.54□□□□□ -1.68
LINC01541-202ENST00000568095 BOD1L1Q8NFC6 3051 aa4.54□□□□□ -1.68
LINC01541-202ENST00000568095 SIRPB1O00241 398 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 S1PR2O95136 353 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 CA2P00918 260 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 CGAP01215 116 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 CRYAAP02489 173 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 FRMD6-AS1P0C7T7 363 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 STAG3L2P0CL84 134 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 STAG3L3P0CL85 134 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 AREGP15514 252 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 WT1P19544 449 aaPredicted RBP4.53□□□□□ -1.68
LINC01541-202ENST00000568095 KRTDAPP60985 99 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 RPL11P62913 178 aaKnown RBP4.53□□□□□ -1.68
LINC01541-202ENST00000568095 CX3CL1P78423 397 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 ZNF90Q03938 601 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 S100A7AQ86SG5 101 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 ST6GALNAC3Q8NDV1 305 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 OR51H1Q8NH63 302 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 RCHY1Q96PM5 261 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 TXN2Q99757 166 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 CST9LQ9H4G1 147 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 TMEM38BQ9NVV0 291 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 MTCH1Q9NZJ7 389 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 C1RLQ9NZP8 487 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 ERRFI1Q9UJM3 462 aaPredicted RBP4.53□□□□□ -1.68
LINC01541-202ENST00000568095 WDR83OSQ9Y284 106 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 TRAV9-2A0A087WT02 112 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 A0A0G2JMM0 328 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 A0A1W2PPB8 328 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 A0A1W2PRS3 328 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 LRRC30A6NM36 301 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 KIR3DP1A8MWS1 328 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 FCN1O00602 326 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 TAX1BP3O14907 124 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 RAMP3O60896 148 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 SS18L1O75177 396 aaPredicted RBP4.53□□□□□ -1.68
LINC01541-202ENST00000568095 NEURL1O76050 574 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 CCL3P10147 92 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 EGR1P18146 543 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 BMI1P35226 326 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 RPEL1Q2QD12 228 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 RAET1LQ5VY80 246 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 IGFL2Q6UWQ7 119 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 FGFRL1Q8N441 504 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 TSKUQ8WUA8 353 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 FAM216AQ8WUB2 273 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 CITED2Q99967 270 aaPredicted RBP4.53□□□□□ -1.68
LINC01541-202ENST00000568095 KLRF1Q9NZS2 232 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 IL19Q9UHD0 177 aa4.53□□□□□ -1.68
LINC01541-202ENST00000568095 TRAV24A0A0B4J272 114 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 SNURFLB1AK76 121 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 M0QZ24 198 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 NDUFS8O00217 210 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 CDIPTO14735 213 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 CEACAM4O75871 244 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 LIFP15018 202 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 APOBEC3AP31941 199 aaPredicted RBP4.52□□□□□ -1.69
LINC01541-202ENST00000568095 IGFBP7Q16270 282 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 VASH2Q86V25 355 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 MMD2Q8IY49 270 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 MDS2Q8NDY4 140 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 OR5T1Q8NG75 326 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 OR4C5Q8NGB2 326 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 OR8B3Q8NGG8 313 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 CPT1CQ8TCG5 803 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 WIPF2Q8TF74 440 aaPredicted RBP4.52□□□□□ -1.69
LINC01541-202ENST00000568095 OR8B2Q96RD0 313 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 SF3B5Q9BWJ5 86 aaKnown RBP4.52□□□□□ -1.69
LINC01541-202ENST00000568095 DEPPQ9NTK1 212 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 ARL2-SNX15V9GYD0 113 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 ARHGAP21Q5T5U3 1957 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 GTF3C1Q12789 2109 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 SCO2A0A1W2PP80 73 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 RNF212BA8MTL3 300 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 TMEM238C9JI98 176 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 CRXO43186 299 aaPredicted RBP4.52□□□□□ -1.69
LINC01541-202ENST00000568095 ZIC3O60481 467 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 MPDU1O75352 247 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 NBEAP1P0C6P0 100 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 OPRK1P41145 380 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 IER3P46695 156 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 HINT1P49773 126 aaPredicted RBP4.52□□□□□ -1.69
LINC01541-202ENST00000568095 SSR4P51571 173 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 TMPRSS3P57727 454 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 SELENOVP59797 346 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 RPL19P84098 196 aaKnown RBP4.52□□□□□ -1.69
LINC01541-202ENST00000568095 PMP22Q01453 160 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 TGFBR3Q03167 851 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 SRSF6Q13247 344 aaKnown RBP4.52□□□□□ -1.69
LINC01541-202ENST00000568095 KLF5Q13887 457 aaPredicted RBP4.52□□□□□ -1.69
LINC01541-202ENST00000568095 CEACAM21Q3KPI0 293 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 VWA1Q6PCB0 445 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 SCCPDHQ8NBX0 429 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 OR10P1Q8NGE3 313 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 PIGCQ92535 297 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 DEFB126Q9BYW3 111 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 ULBP2Q9BZM5 246 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 OR2H1Q9GZK4 316 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 OR1A1Q9P1Q5 309 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms