RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 WDR54Q9H977 334 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 CXorf21Q9HAI6 301 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 HES4Q9HCC6 221 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 CDC42SE1Q9NRR8 79 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 ZNHIT6Q9NWK9 470 aaKnown RBP-0.16□□□□□ -2.44
CDH1-211ENST00000567320 MS4A12Q9NXJ0 267 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 EURLQ9NYK6 297 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 EMC3Q9P0I2 261 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 FUT9Q9Y231 359 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 PRELID1Q9Y255 219 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 TIMM9Q9Y5J7 89 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 SNX10Q9Y5X0 201 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 BCL9O00512 1426 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 NUP160Q12769 1436 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 NAV3Q8IVL0 2385 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 KIAA2026Q5HYC2 2103 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 PLXNA4Q9HCM2 1894 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 MAP3K19Q56UN5 1328 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 CITO14578 2027 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 ARFGEF3Q5TH69 2177 aa-0.16□□□□□ -2.44
CDH1-211ENST00000567320 LOC285556D6RIA3 1793 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 CUL9Q8IWT3 2517 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 MTUS2Q5JR59 1369 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 EML6Q6ZMW3 1958 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 CASP8AP2Q9UKL3 1982 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 GOLGA8QA0A0J9YX86 632 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 A0A0J9YY10 115 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 A0A1B0GX78 115 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 RAB19A4D1S5 217 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 NUPR2A6NF83 97 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 CCDC160A6NGH7 325 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 ZNF736B4DX44 427 aaPredicted RBP-0.17□□□□□ -2.44
CDH1-211ENST00000567320 C21orf140B9A014 251 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 F5H5K5 113 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 INMT-MINDY4F8WBC2 141 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 MKRN2OSH3BPM6 223 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 BUB1B-PAK6H3BSN5 160 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 I3L521 148 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 GOLGA8RI6L899 631 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 K7ERQ8 282 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 M0R2N4 97 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 SDCBPO00560 298 aaPredicted RBP-0.17□□□□□ -2.44
CDH1-211ENST00000567320 COPEO14579 308 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 ACOX3O15254 700 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 CCL25O15444 150 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 ATP8B1O43520 1251 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 CREBL2O60519 120 aaPredicted RBP-0.17□□□□□ -2.44
CDH1-211ENST00000567320 NOS1APO75052 506 aaPredicted RBP-0.17□□□□□ -2.44
CDH1-211ENST00000567320 KLF7O75840 302 aaPredicted RBP-0.17□□□□□ -2.44
CDH1-211ENST00000567320 APOMO95445 188 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 SNAP29O95721 258 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 LY6G6CO95867 125 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 TCL1BO95988 128 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 MT-CO2P00403 227 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 OTCP00480 354 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 HLA-DRAP01903 254 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 HBZP02008 142 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 SULT1A3P0DMM9 295 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 SULT1A4P0DMN0 295 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 SFTPCP11686 197 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 CCL2P13500 99 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 RPS4Y1P22090 263 aaKnown RBP-0.17□□□□□ -2.44
CDH1-211ENST00000567320 MAP2K4P45985 399 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 SLCO1A2P46721 670 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 EIF2B2P49770 351 aaKnown RBP-0.17□□□□□ -2.44
CDH1-211ENST00000567320 ZNF80P51504 273 aaPredicted RBP-0.17□□□□□ -2.44
CDH1-211ENST00000567320 ZNF137PP52743 207 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 DLX6P56179 175 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 DEFA1P59665 94 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 SNAP25P60880 206 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 CXCR4P61073 352 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 DAD1P61803 113 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 AP1S1P61966 158 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 VSNL1P62760 191 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 RPS24P62847 133 aaKnown RBP-0.17□□□□□ -2.44
CDH1-211ENST00000567320 RPL30P62888 115 aaKnown RBP-0.17□□□□□ -2.44
CDH1-211ENST00000567320 FKBP1AP62942 108 aaKnown RBP-0.17□□□□□ -2.44
CDH1-211ENST00000567320 TNNC1P63316 161 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 BTN3A2P78410 334 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 FLOT2Q14254 428 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 ZNHIT3Q15649 155 aaPredicted RBP-0.17□□□□□ -2.44
CDH1-211ENST00000567320 EXOC3L4Q17RC7 722 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 HLA-DRB5Q30154 266 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 BCORL1Q5H9F3 1711 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 C1orf194Q5T5A4 169 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 C9orf64Q5T6V5 341 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 SYPL2Q5VXT5 272 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 SBSNQ6UWP8 590 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 ALKAL1Q6UXT8 129 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 SOSTDC1Q6X4U4 206 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 SSX6Q7RTT6 188 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 DCXRQ7Z4W1 244 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 MRPL52Q86TS9 123 aaKnown RBP-0.17□□□□□ -2.44
CDH1-211ENST00000567320 CNPY4Q8N129 248 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 UBL4BQ8N7F7 174 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 C3orf56Q8N813 242 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 TMEM161BQ8NDZ6 487 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 OR52E4Q8NGH9 312 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 TERB2Q8NHR7 220 aa-0.17□□□□□ -2.44
CDH1-211ENST00000567320 PFN4Q8NHR9 129 aa-0.17□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms