RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 CT45A7P0DMV0 189 aa10.63□□□□□ -0.71
CLK3-218ENST00000566926 CD28P10747 220 aa10.63□□□□□ -0.71
CLK3-218ENST00000566926 NQO2P16083 231 aa10.63□□□□□ -0.71
CLK3-218ENST00000566926 LPAR6P43657 344 aa10.63□□□□□ -0.71
CLK3-218ENST00000566926 NMSQ5H8A3 153 aa10.63□□□□□ -0.71
CLK3-218ENST00000566926 SLC35E3Q7Z769 313 aa10.63□□□□□ -0.71
CLK3-218ENST00000566926 PDPNQ86YL7 162 aa10.63□□□□□ -0.71
CLK3-218ENST00000566926 OSR1Q8TAX0 266 aaPredicted RBP10.63□□□□□ -0.71
CLK3-218ENST00000566926 GPHA2Q96T91 129 aa10.63□□□□□ -0.71
CLK3-218ENST00000566926 NABP2Q9BQ15 211 aa10.63□□□□□ -0.71
CLK3-218ENST00000566926 PRR13Q9NZ81 148 aa10.63□□□□□ -0.71
CLK3-218ENST00000566926 PSMB11A5LHX3 300 aa10.62□□□□□ -0.71
CLK3-218ENST00000566926 SH2D7A6NKC9 451 aaPredicted RBP10.62□□□□□ -0.71
CLK3-218ENST00000566926 CCSO14618 274 aa10.62□□□□□ -0.71
CLK3-218ENST00000566926 RAMP3O60896 148 aa10.62□□□□□ -0.71
CLK3-218ENST00000566926 SIX6O95475 246 aa10.62□□□□□ -0.71
CLK3-218ENST00000566926 TSPAN15O95858 294 aa10.62□□□□□ -0.71
CLK3-218ENST00000566926 PSMB6P28072 239 aa10.62□□□□□ -0.71
CLK3-218ENST00000566926 EIF2B2P49770 351 aaKnown RBP10.62□□□□□ -0.71
CLK3-218ENST00000566926 SLC35B1P78383 322 aa10.62□□□□□ -0.71
CLK3-218ENST00000566926 POU2AF1Q16633 256 aa10.62□□□□□ -0.71
CLK3-218ENST00000566926 NSUN5P1Q3KNT7 163 aa10.62□□□□□ -0.71
CLK3-218ENST00000566926 NOXA1Q86UR1 476 aa10.62□□□□□ -0.71
CLK3-218ENST00000566926 Q8N9W7 124 aa10.62□□□□□ -0.71
CLK3-218ENST00000566926 ZNF383Q8NA42 475 aa10.62□□□□□ -0.71
CLK3-218ENST00000566926 DRAXINQ8NBI3 349 aaPredicted RBP10.62□□□□□ -0.71
CLK3-218ENST00000566926 OR4F17Q8NGA8 305 aa10.62□□□□□ -0.71
CLK3-218ENST00000566926 FAM110DQ8TAY7 271 aaPredicted RBP10.62□□□□□ -0.71
CLK3-218ENST00000566926 PPP1R1CQ8WVI7 109 aa10.62□□□□□ -0.71
CLK3-218ENST00000566926 OR4F4Q96R69 305 aa10.62□□□□□ -0.71
CLK3-218ENST00000566926 CITED2Q99967 270 aaPredicted RBP10.62□□□□□ -0.71
CLK3-218ENST00000566926 GON7Q9BXV9 100 aa10.62□□□□□ -0.71
CLK3-218ENST00000566926 MRPL20Q9BYC9 149 aaKnown RBP10.62□□□□□ -0.71
CLK3-218ENST00000566926 SLC35D1Q9NTN3 355 aa10.62□□□□□ -0.71
CLK3-218ENST00000566926 WASHC3Q9Y3C0 194 aa10.62□□□□□ -0.71
CLK3-218ENST00000566926 MARCH11A6NNE9 402 aa10.61□□□□□ -0.71
CLK3-218ENST00000566926 FAM90A26D6RGX4 464 aa10.61□□□□□ -0.71
CLK3-218ENST00000566926 H0YJW9 148 aa10.61□□□□□ -0.71
CLK3-218ENST00000566926 AP4M1O00189 453 aa10.61□□□□□ -0.71
CLK3-218ENST00000566926 S1PR2O95136 353 aa10.61□□□□□ -0.71
CLK3-218ENST00000566926 LY86O95711 162 aa10.61□□□□□ -0.71
CLK3-218ENST00000566926 RLN2P04090 185 aa10.61□□□□□ -0.71
CLK3-218ENST00000566926 C4BPBP20851 252 aa10.61□□□□□ -0.71
CLK3-218ENST00000566926 CD300CQ08708 224 aa10.61□□□□□ -0.71
CLK3-218ENST00000566926 SMCO1Q147U7 214 aa10.61□□□□□ -0.71
CLK3-218ENST00000566926 MMDQ15546 238 aa10.61□□□□□ -0.71
CLK3-218ENST00000566926 COMMD1Q8N668 190 aa10.61□□□□□ -0.71
CLK3-218ENST00000566926 ZBTB8BQ8NAP8 495 aaPredicted RBP10.61□□□□□ -0.71
CLK3-218ENST00000566926 THAP6Q8TBB0 222 aa10.61□□□□□ -0.71
CLK3-218ENST00000566926 R3HDM4Q96D70 268 aa10.61□□□□□ -0.71
CLK3-218ENST00000566926 SEC22AQ96IW7 307 aa10.61□□□□□ -0.71
CLK3-218ENST00000566926 OR10C1Q96KK4 312 aa10.61□□□□□ -0.71
CLK3-218ENST00000566926 RNF5Q99942 180 aa10.61□□□□□ -0.71
CLK3-218ENST00000566926 PLSCR3Q9NRY6 295 aa10.61□□□□□ -0.71
CLK3-218ENST00000566926 GSKIPQ9P0R6 139 aa10.61□□□□□ -0.71
CLK3-218ENST00000566926 KIAA1456Q9P272 454 aa10.61□□□□□ -0.71
CLK3-218ENST00000566926 TSSC4Q9Y5U2 329 aaPredicted RBP10.61□□□□□ -0.71
CLK3-218ENST00000566926 VWFP04275 2813 aa10.6□□□□□ -0.71
CLK3-218ENST00000566926 TCRBV4S1A1TA0A5B7 111 aa10.6□□□□□ -0.71
CLK3-218ENST00000566926 HMSDA8MTL9 139 aa10.6□□□□□ -0.71
CLK3-218ENST00000566926 BOLA2-SMG1P6H3BVE0 249 aa10.6□□□□□ -0.71
CLK3-218ENST00000566926 KRASP01116 189 aa10.6□□□□□ -0.71
CLK3-218ENST00000566926 IGKV1-39P01597 117 aa10.6□□□□□ -0.71
CLK3-218ENST00000566926 IGKV1D-39P04432 117 aa10.6□□□□□ -0.71
CLK3-218ENST00000566926 FGF2P09038 288 aa10.6□□□□□ -0.71
CLK3-218ENST00000566926 SLC25A4P12235 298 aa10.6□□□□□ -0.71
CLK3-218ENST00000566926 BRWD1-AS2P59051 145 aa10.6□□□□□ -0.71
CLK3-218ENST00000566926 IL15RAQ13261 267 aa10.6□□□□□ -0.71
CLK3-218ENST00000566926 TMEM177Q53S58 311 aa10.6□□□□□ -0.71
CLK3-218ENST00000566926 OR2B11Q5JQS5 317 aa10.6□□□□□ -0.71
CLK3-218ENST00000566926 TMEM65Q6PI78 240 aa10.6□□□□□ -0.71
CLK3-218ENST00000566926 H2BFWTQ7Z2G1 175 aa10.6□□□□□ -0.71
CLK3-218ENST00000566926 FAM71E2Q8N5Q1 922 aa10.6□□□□□ -0.71
CLK3-218ENST00000566926 VSTM2AQ8TAG5 236 aa10.6□□□□□ -0.71
CLK3-218ENST00000566926 FLYWCH2Q96CP2 140 aaKnown RBP10.6□□□□□ -0.71
CLK3-218ENST00000566926 H7C2Y5 167 aa10.59□□□□□ -0.71
CLK3-218ENST00000566926 NBR2O15453 112 aa10.59□□□□□ -0.71
CLK3-218ENST00000566926 ST8SIA3O43173 380 aa10.59□□□□□ -0.71
CLK3-218ENST00000566926 MPC2O95563 127 aa10.59□□□□□ -0.71
CLK3-218ENST00000566926 CRYZL1O95825 349 aa10.59□□□□□ -0.71
CLK3-218ENST00000566926 IGKV1-5P01602 117 aa10.59□□□□□ -0.71
CLK3-218ENST00000566926 P0C879 139 aa10.59□□□□□ -0.71
CLK3-218ENST00000566926 PVALBP20472 110 aaPredicted RBP10.59□□□□□ -0.71
CLK3-218ENST00000566926 NKX2-1P43699 371 aaPredicted RBP10.59□□□□□ -0.71
CLK3-218ENST00000566926 LGALS7P47929 136 aa10.59□□□□□ -0.71
CLK3-218ENST00000566926 F2RL1P55085 397 aa10.59□□□□□ -0.71
CLK3-218ENST00000566926 C11orf87Q6NUJ2 197 aa10.59□□□□□ -0.71
CLK3-218ENST00000566926 PRSS54Q6PEW0 395 aa10.59□□□□□ -0.71
CLK3-218ENST00000566926 STPG2Q8N412 459 aa10.59□□□□□ -0.71
CLK3-218ENST00000566926 DMBX1Q8NFW5 382 aa10.59□□□□□ -0.71
CLK3-218ENST00000566926 OR4D5Q8NGN0 318 aa10.59□□□□□ -0.71
CLK3-218ENST00000566926 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.59□□□□□ -0.71
CLK3-218ENST00000566926 MPTX1A8MV57 137 aa10.58□□□□□ -0.72
CLK3-218ENST00000566926 SHOXO15266 292 aa10.58□□□□□ -0.72
CLK3-218ENST00000566926 PITX3O75364 302 aa10.58□□□□□ -0.72
CLK3-218ENST00000566926 MED6O75586 246 aa10.58□□□□□ -0.72
CLK3-218ENST00000566926 G6PCP35575 357 aa10.58□□□□□ -0.72
CLK3-218ENST00000566926 NUP62P37198 522 aaPredicted RBP10.58□□□□□ -0.72
CLK3-218ENST00000566926 AARDQ4LEZ3 155 aa10.58□□□□□ -0.72
CLK3-218ENST00000566926 KHDC1LQ5JSQ8 128 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms