RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 WFDC11Q8NEX6 87 aa14.21□□□□□ -0.13
HERC2-208ENST00000566635 ZNF471Q9BX82 626 aaPredicted RBP14.21□□□□□ -0.13
HERC2-208ENST00000566635 WSB1Q9Y6I7 421 aa14.21□□□□□ -0.13
HERC2-208ENST00000566635 ZFHX3Q15911 3703 aa14.2□□□□□ -0.14
HERC2-208ENST00000566635 MED6O75586 246 aa14.2□□□□□ -0.14
HERC2-208ENST00000566635 SPDEFO95238 335 aa14.2□□□□□ -0.14
HERC2-208ENST00000566635 IGKV1D-33P01593 117 aa14.2□□□□□ -0.14
HERC2-208ENST00000566635 IGKV1-33P01594 117 aa14.2□□□□□ -0.14
HERC2-208ENST00000566635 OPN1MWP04001 364 aa14.2□□□□□ -0.14
HERC2-208ENST00000566635 OPN1MW2P0DN77 364 aa14.2□□□□□ -0.14
HERC2-208ENST00000566635 OPN1MW3P0DN78 364 aa14.2□□□□□ -0.14
HERC2-208ENST00000566635 RPL23AP62750 156 aaKnown RBP14.2□□□□□ -0.14
HERC2-208ENST00000566635 CLLU1Q5K131 121 aa14.2□□□□□ -0.14
HERC2-208ENST00000566635 GPR157Q5UAW9 335 aa14.2□□□□□ -0.14
HERC2-208ENST00000566635 BRD3OSQ6XYD6 125 aa14.2□□□□□ -0.14
HERC2-208ENST00000566635 SMIM8Q96KF7 97 aa14.2□□□□□ -0.14
HERC2-208ENST00000566635 CYTL1Q9NRR1 136 aa14.2□□□□□ -0.14
HERC2-208ENST00000566635 TCF19Q9Y242 345 aa14.2□□□□□ -0.14
HERC2-208ENST00000566635 OR51B2Q9Y5P1 312 aa14.2□□□□□ -0.14
HERC2-208ENST00000566635 ITPR3Q14573 2671 aa14.2□□□□□ -0.14
HERC2-208ENST00000566635 CST7O76096 145 aa14.2□□□□□ -0.14
HERC2-208ENST00000566635 AVPP01185 164 aa14.2□□□□□ -0.14
HERC2-208ENST00000566635 IGHV4-31P0DP07 118 aa14.2□□□□□ -0.14
HERC2-208ENST00000566635 CD1BP29016 333 aa14.2□□□□□ -0.14
HERC2-208ENST00000566635 SPCS3P61009 180 aa14.2□□□□□ -0.14
HERC2-208ENST00000566635 HNF4GQ14541 408 aa14.2□□□□□ -0.14
HERC2-208ENST00000566635 TMEM249Q2WGJ8 235 aa14.2□□□□□ -0.14
HERC2-208ENST00000566635 VMA21Q3ZAQ7 101 aa14.2□□□□□ -0.14
HERC2-208ENST00000566635 PXDC1Q5TGL8 231 aa14.2□□□□□ -0.14
HERC2-208ENST00000566635 CCDC144NLQ6NUI1 221 aa14.2□□□□□ -0.14
HERC2-208ENST00000566635 TMEM167AQ8TBQ9 72 aa14.2□□□□□ -0.14
HERC2-208ENST00000566635 PRNDQ9UKY0 176 aa14.2□□□□□ -0.14
HERC2-208ENST00000566635 TNCP24821 2201 aa14.19□□□□□ -0.14
HERC2-208ENST00000566635 IGHV1-69DA0A0B4J2H0 117 aa14.19□□□□□ -0.14
HERC2-208ENST00000566635 OOSP1A8MZH6 123 aa14.19□□□□□ -0.14
HERC2-208ENST00000566635 TSPAN9O75954 239 aa14.19□□□□□ -0.14
HERC2-208ENST00000566635 IGHV1-69P01742 117 aa14.19□□□□□ -0.14
HERC2-208ENST00000566635 LGALS7P47929 136 aa14.19□□□□□ -0.14
HERC2-208ENST00000566635 SPANXN5Q5MJ07 72 aa14.19□□□□□ -0.14
HERC2-208ENST00000566635 OR52E5Q8NH55 327 aa14.19□□□□□ -0.14
HERC2-208ENST00000566635 MALSU1Q96EH3 234 aa14.19□□□□□ -0.14
HERC2-208ENST00000566635 PRRC2AP48634 2157 aaKnown RBP14.19□□□□□ -0.14
HERC2-208ENST00000566635 CCDC168Q8NDH2 2452 aa14.18□□□□□ -0.14
HERC2-208ENST00000566635 RPS10-NUDT3A0A1W2PQS6 291 aa14.18□□□□□ -0.14
HERC2-208ENST00000566635 SNRNP70P08621 437 aaKnown RBP14.18□□□□□ -0.14
HERC2-208ENST00000566635 PJVKQ0ZLH3 352 aa14.18□□□□□ -0.14
HERC2-208ENST00000566635 PSG5Q15238 335 aa14.18□□□□□ -0.14
HERC2-208ENST00000566635 MRGPRG-AS1Q2M3A8 158 aa14.18□□□□□ -0.14
HERC2-208ENST00000566635 PDLIM3Q53GG5 364 aaPredicted RBP14.18□□□□□ -0.14
HERC2-208ENST00000566635 VSTM2AQ8TAG5 236 aa14.18□□□□□ -0.14
HERC2-208ENST00000566635 OR4C12Q96R67 309 aa14.18□□□□□ -0.14
HERC2-208ENST00000566635 HINT2Q9BX68 163 aa14.18□□□□□ -0.14
HERC2-208ENST00000566635 SLC25A31Q9H0C2 315 aa14.18□□□□□ -0.14
HERC2-208ENST00000566635 ZNF430Q9H8G1 570 aaPredicted RBP14.18□□□□□ -0.14
HERC2-208ENST00000566635 TGFAP01135 160 aa14.18□□□□□ -0.14
HERC2-208ENST00000566635 HSPE1P61604 102 aaKnown RBP14.18□□□□□ -0.14
HERC2-208ENST00000566635 RPL8P62917 257 aaKnown RBP14.18□□□□□ -0.14
HERC2-208ENST00000566635 HES1Q14469 280 aa14.18□□□□□ -0.14
HERC2-208ENST00000566635 C10orf55Q5SWW7 151 aa14.18□□□□□ -0.14
HERC2-208ENST00000566635 TMEM217Q8N7C4 229 aa14.18□□□□□ -0.14
HERC2-208ENST00000566635 ST8SIA2Q92186 375 aa14.18□□□□□ -0.14
HERC2-208ENST00000566635 WFDC1Q9HC57 220 aa14.18□□□□□ -0.14
HERC2-208ENST00000566635 CREBBPQ92793 2442 aa14.17□□□□□ -0.14
HERC2-208ENST00000566635 I3L521 148 aa14.17□□□□□ -0.14
HERC2-208ENST00000566635 CRYGBP07316 175 aa14.17□□□□□ -0.14
HERC2-208ENST00000566635 METTL15P1P0C7V9 234 aa14.17□□□□□ -0.14
HERC2-208ENST00000566635 GATA3P23771 443 aa14.17□□□□□ -0.14
HERC2-208ENST00000566635 HOXA1P49639 335 aaPredicted RBP14.17□□□□□ -0.14
HERC2-208ENST00000566635 F2RL1P55085 397 aa14.17□□□□□ -0.14
HERC2-208ENST00000566635 TAS2R30P59541 319 aa14.17□□□□□ -0.14
HERC2-208ENST00000566635 CTAG1AP78358 180 aa14.17□□□□□ -0.14
HERC2-208ENST00000566635 EXOSC2Q13868 293 aaKnown RBP14.17□□□□□ -0.14
HERC2-208ENST00000566635 RPL7L1Q6DKI1 246 aaKnown RBP14.17□□□□□ -0.14
HERC2-208ENST00000566635 OR4A5Q8NH83 315 aa14.17□□□□□ -0.14
HERC2-208ENST00000566635 EAF1Q96JC9 268 aaPredicted RBP14.17□□□□□ -0.14
HERC2-208ENST00000566635 TSNAXQ99598 290 aaKnown RBP14.17□□□□□ -0.14
HERC2-208ENST00000566635 TEX50A0A1B0GTY4 177 aa14.17□□□□□ -0.14
HERC2-208ENST00000566635 SCO1O75880 301 aa14.17□□□□□ -0.14
HERC2-208ENST00000566635 VDAC2P45880 294 aaPredicted RBP14.17□□□□□ -0.14
HERC2-208ENST00000566635 DYNLT3P51808 116 aa14.17□□□□□ -0.14
HERC2-208ENST00000566635 UBA52P62987 128 aaKnown RBP14.17□□□□□ -0.14
HERC2-208ENST00000566635 AANATQ16613 207 aa14.17□□□□□ -0.14
HERC2-208ENST00000566635 KLF17Q5JT82 389 aaPredicted RBP14.17□□□□□ -0.14
HERC2-208ENST00000566635 FAM120AOSQ5T036 256 aa14.17□□□□□ -0.14
HERC2-208ENST00000566635 HAPLN4Q86UW8 402 aa14.17□□□□□ -0.14
HERC2-208ENST00000566635 THNSL2Q86YJ6 484 aa14.17□□□□□ -0.14
HERC2-208ENST00000566635 METTL1Q9UBP6 276 aaKnown RBP14.17□□□□□ -0.14
HERC2-208ENST00000566635 SOX21Q9Y651 276 aaPredicted RBP14.17□□□□□ -0.14
HERC2-208ENST00000566635 MOSP00540 346 aa14.16□□□□□ -0.14
HERC2-208ENST00000566635 FGF2P09038 288 aa14.16□□□□□ -0.14
HERC2-208ENST00000566635 SULT1A1P50225 295 aa14.16□□□□□ -0.14
HERC2-208ENST00000566635 CLINT1Q14677 625 aa14.16□□□□□ -0.14
HERC2-208ENST00000566635 MMDQ15546 238 aa14.16□□□□□ -0.14
HERC2-208ENST00000566635 STX12Q86Y82 276 aa14.16□□□□□ -0.14
HERC2-208ENST00000566635 CIARTQ8N365 385 aaPredicted RBP14.16□□□□□ -0.14
HERC2-208ENST00000566635 TEX45Q8NA69 505 aa14.16□□□□□ -0.14
HERC2-208ENST00000566635 OR5C1Q8NGR4 320 aa14.16□□□□□ -0.14
HERC2-208ENST00000566635 CIB3Q96Q77 187 aaPredicted RBP14.16□□□□□ -0.14
HERC2-208ENST00000566635 CLCC1Q96S66 551 aa14.16□□□□□ -0.14
HERC2-208ENST00000566635 FBXL15Q9H469 300 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms