RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 APOA1P02647 267 aa11.12□□□□□ -0.63
FANCA-220ENST00000566409 RPA2P15927 270 aa11.12□□□□□ -0.63
FANCA-220ENST00000566409 NQO2P16083 231 aa11.12□□□□□ -0.63
FANCA-220ENST00000566409 EDN2P20800 178 aa11.12□□□□□ -0.63
FANCA-220ENST00000566409 HLA-DMAP28067 261 aa11.12□□□□□ -0.63
FANCA-220ENST00000566409 HRH1P35367 487 aa11.12□□□□□ -0.63
FANCA-220ENST00000566409 HERV-K104P61576 105 aa11.12□□□□□ -0.63
FANCA-220ENST00000566409 CATR1Q13166 79 aa11.12□□□□□ -0.63
FANCA-220ENST00000566409 CTF1Q16619 201 aa11.12□□□□□ -0.63
FANCA-220ENST00000566409 AADACL3Q5VUY0 350 aa11.12□□□□□ -0.63
FANCA-220ENST00000566409 OR5H2Q8NGV7 314 aa11.12□□□□□ -0.63
FANCA-220ENST00000566409 CCDC140Q96MF4 163 aa11.12□□□□□ -0.63
FANCA-220ENST00000566409 CMTM3Q96MX0 182 aa11.12□□□□□ -0.63
FANCA-220ENST00000566409 FXYD6Q9H0Q3 95 aa11.12□□□□□ -0.63
FANCA-220ENST00000566409 PLEKHA2Q9HB19 425 aa11.12□□□□□ -0.63
FANCA-220ENST00000566409 HRASLSQ9HDD0 168 aa11.12□□□□□ -0.63
FANCA-220ENST00000566409 TMEM140Q9NV12 185 aa11.12□□□□□ -0.63
FANCA-220ENST00000566409 IGLC7A0M8Q6 106 aa11.11□□□□□ -0.63
FANCA-220ENST00000566409 DPPA5A6NC42 116 aa11.11□□□□□ -0.63
FANCA-220ENST00000566409 RLN1P04808 185 aa11.11□□□□□ -0.63
FANCA-220ENST00000566409 IGHV4-30-4P0DP06 118 aa11.11□□□□□ -0.63
FANCA-220ENST00000566409 TAS2R46P59540 309 aa11.11□□□□□ -0.63
FANCA-220ENST00000566409 TATDN3Q17R31 274 aa11.11□□□□□ -0.63
FANCA-220ENST00000566409 ZNF585BQ52M93 769 aa11.11□□□□□ -0.63
FANCA-220ENST00000566409 FCAMRQ8WWV6 532 aa11.11□□□□□ -0.63
FANCA-220ENST00000566409 AIFM2Q9BRQ8 373 aa11.11□□□□□ -0.63
FANCA-220ENST00000566409 C19orf73Q9NVV2 129 aa11.11□□□□□ -0.63
FANCA-220ENST00000566409 IGLV11-55A0A075B6I3 123 aa11.1□□□□□ -0.63
FANCA-220ENST00000566409 OR2C1O95371 312 aa11.1□□□□□ -0.63
FANCA-220ENST00000566409 F2RP25116 425 aa11.1□□□□□ -0.63
FANCA-220ENST00000566409 SNX29P2Q8IUI4 249 aa11.1□□□□□ -0.63
FANCA-220ENST00000566409 OR10W1Q8NGF6 305 aa11.1□□□□□ -0.63
FANCA-220ENST00000566409 OR6F1Q8NGZ6 308 aa11.1□□□□□ -0.63
FANCA-220ENST00000566409 CD300LFQ8TDQ1 290 aa11.1□□□□□ -0.63
FANCA-220ENST00000566409 COMMD9Q9P000 198 aa11.1□□□□□ -0.63
FANCA-220ENST00000566409 RYR3Q15413 4870 aa11.1□□□□□ -0.63
FANCA-220ENST00000566409 TEX50A0A1B0GTY4 177 aa11.09□□□□□ -0.63
FANCA-220ENST00000566409 SMIM31A0A1B0GVY4 71 aa11.09□□□□□ -0.63
FANCA-220ENST00000566409 MFSD2BA6NFX1 497 aa11.09□□□□□ -0.63
FANCA-220ENST00000566409 A8MZ25 164 aa11.09□□□□□ -0.63
FANCA-220ENST00000566409 H0Y980 276 aa11.09□□□□□ -0.63
FANCA-220ENST00000566409 GABARAPO95166 117 aa11.09□□□□□ -0.63
FANCA-220ENST00000566409 LPAR6P43657 344 aa11.09□□□□□ -0.63
FANCA-220ENST00000566409 RORCP51449 518 aa11.09□□□□□ -0.63
FANCA-220ENST00000566409 CLEC19AQ6UXS0 136 aa11.09□□□□□ -0.63
FANCA-220ENST00000566409 DMBX1Q8NFW5 382 aa11.09□□□□□ -0.63
FANCA-220ENST00000566409 BORCS5Q969J3 196 aa11.09□□□□□ -0.63
FANCA-220ENST00000566409 DGCR14Q96DF8 476 aaKnown RBP11.09□□□□□ -0.63
FANCA-220ENST00000566409 RCHY1Q96PM5 261 aa11.09□□□□□ -0.63
FANCA-220ENST00000566409 SCPEP1Q9HB40 452 aa11.09□□□□□ -0.63
FANCA-220ENST00000566409 PEMTQ9UBM1 199 aa11.09□□□□□ -0.63
FANCA-220ENST00000566409 DYNC2H1Q8NCM8 4307 aaKnown RBP11.08□□□□□ -0.64
FANCA-220ENST00000566409 MARCH11A6NNE9 402 aa11.08□□□□□ -0.64
FANCA-220ENST00000566409 ZNF785A8K8V0 405 aa11.08□□□□□ -0.64
FANCA-220ENST00000566409 GPR31O00270 319 aa11.08□□□□□ -0.64
FANCA-220ENST00000566409 GGCTO75223 188 aaKnown RBP11.08□□□□□ -0.64
FANCA-220ENST00000566409 FGF2P09038 288 aa11.08□□□□□ -0.64
FANCA-220ENST00000566409 WT1-ASQ06250 92 aa11.08□□□□□ -0.64
FANCA-220ENST00000566409 CD300EQ496F6 205 aaPredicted RBP11.08□□□□□ -0.64
FANCA-220ENST00000566409 PHLDA2Q53GA4 152 aa11.08□□□□□ -0.64
FANCA-220ENST00000566409 GPHB5Q86YW7 130 aa11.08□□□□□ -0.64
FANCA-220ENST00000566409 Q8N402 240 aa11.08□□□□□ -0.64
FANCA-220ENST00000566409 TM2D3Q9BRN9 247 aa11.08□□□□□ -0.64
FANCA-220ENST00000566409 QTRT1Q9BXR0 403 aaKnown RBP11.08□□□□□ -0.64
FANCA-220ENST00000566409 COMMD5Q9GZQ3 224 aa11.08□□□□□ -0.64
FANCA-220ENST00000566409 TENM2Q9NT68 2774 aa11.08□□□□□ -0.64
FANCA-220ENST00000566409 C2orf70A6NJV1 201 aa11.07□□□□□ -0.64
FANCA-220ENST00000566409 LGALS9O00182 355 aa11.07□□□□□ -0.64
FANCA-220ENST00000566409 DHFRP00374 187 aa11.07□□□□□ -0.64
FANCA-220ENST00000566409 KRASP01116 189 aa11.07□□□□□ -0.64
FANCA-220ENST00000566409 DEFA4P12838 97 aa11.07□□□□□ -0.64
FANCA-220ENST00000566409 HIST1H1BP16401 226 aaKnown RBP11.07□□□□□ -0.64
FANCA-220ENST00000566409 G6PCP35575 357 aa11.07□□□□□ -0.64
FANCA-220ENST00000566409 ARL3P36405 182 aa11.07□□□□□ -0.64
FANCA-220ENST00000566409 MFAP2P55001 183 aa11.07□□□□□ -0.64
FANCA-220ENST00000566409 DEFB114Q30KQ6 69 aa11.07□□□□□ -0.64
FANCA-220ENST00000566409 FAM209BQ5JX69 171 aa11.07□□□□□ -0.64
FANCA-220ENST00000566409 GPR107Q5VW38 600 aa11.07□□□□□ -0.64
FANCA-220ENST00000566409 LCN12Q6JVE5 192 aa11.07□□□□□ -0.64
FANCA-220ENST00000566409 CMTM1Q8IZ96 169 aa11.07□□□□□ -0.64
FANCA-220ENST00000566409 CADM3Q8N126 398 aa11.07□□□□□ -0.64
FANCA-220ENST00000566409 SRSF8Q9BRL6 282 aaKnown RBP11.07□□□□□ -0.64
FANCA-220ENST00000566409 KLK11Q9UBX7 282 aa11.07□□□□□ -0.64
FANCA-220ENST00000566409 NSG2Q9Y328 171 aa11.07□□□□□ -0.64
FANCA-220ENST00000566409 DBX1A6NMT0 343 aa11.06□□□□□ -0.64
FANCA-220ENST00000566409 M0QYG6 137 aa11.06□□□□□ -0.64
FANCA-220ENST00000566409 IGKV1-39P01597 117 aa11.06□□□□□ -0.64
FANCA-220ENST00000566409 IGKV1D-39P04432 117 aa11.06□□□□□ -0.64
FANCA-220ENST00000566409 CLEC3BP05452 202 aa11.06□□□□□ -0.64
FANCA-220ENST00000566409 TRAPPC2P0DI81 140 aa11.06□□□□□ -0.64
FANCA-220ENST00000566409 TRAPPC2BP0DI82 140 aa11.06□□□□□ -0.64
FANCA-220ENST00000566409 FOLR2P14207 255 aa11.06□□□□□ -0.64
FANCA-220ENST00000566409 RCVRNP35243 200 aa11.06□□□□□ -0.64
FANCA-220ENST00000566409 ALDH3B2P48448 385 aa11.06□□□□□ -0.64
FANCA-220ENST00000566409 TSPAN5P62079 268 aa11.06□□□□□ -0.64
FANCA-220ENST00000566409 SGPP2Q8IWX5 399 aa11.06□□□□□ -0.64
FANCA-220ENST00000566409 ZNF502Q8TBZ5 544 aa11.06□□□□□ -0.64
FANCA-220ENST00000566409 CACNG8Q8WXS5 425 aa11.06□□□□□ -0.64
FANCA-220ENST00000566409 EEF1AKMT3Q96AZ1 226 aa11.06□□□□□ -0.64
FANCA-220ENST00000566409 ABHD1Q96SE0 405 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms