RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 F2RP25116 425 aa10.49□□□□□ -0.73
VPS9D1-204ENST00000565023 PHLDA2Q53GA4 152 aa10.49□□□□□ -0.73
VPS9D1-204ENST00000565023 FAAP20Q6NZ36 180 aa10.49□□□□□ -0.73
VPS9D1-204ENST00000565023 MMD2Q8IY49 270 aa10.49□□□□□ -0.73
VPS9D1-204ENST00000565023 Q8N402 240 aa10.49□□□□□ -0.73
VPS9D1-204ENST00000565023 MRGPRFQ96AM1 343 aa10.49□□□□□ -0.73
VPS9D1-204ENST00000565023 ZNF486Q96H40 463 aaPredicted RBP10.49□□□□□ -0.73
VPS9D1-204ENST00000565023 FYTTD1Q96QD9 318 aaKnown RBP10.49□□□□□ -0.73
VPS9D1-204ENST00000565023 A0A0G2JLM5 398 aa10.48□□□□□ -0.73
VPS9D1-204ENST00000565023 DISC1C4P0D8 188 aa10.48□□□□□ -0.73
VPS9D1-204ENST00000565023 H3BUA1 57 aa10.48□□□□□ -0.73
VPS9D1-204ENST00000565023 CREBL2O60519 120 aaPredicted RBP10.48□□□□□ -0.73
VPS9D1-204ENST00000565023 HPRT1P00492 218 aa10.48□□□□□ -0.73
VPS9D1-204ENST00000565023 HRASP01112 189 aa10.48□□□□□ -0.73
VPS9D1-204ENST00000565023 TRBV12-3P01733 135 aa10.48□□□□□ -0.73
VPS9D1-204ENST00000565023 OR9G9P0C7N8 305 aa10.48□□□□□ -0.73
VPS9D1-204ENST00000565023 MYOD1P15172 320 aa10.48□□□□□ -0.73
VPS9D1-204ENST00000565023 RPA2P15927 270 aa10.48□□□□□ -0.73
VPS9D1-204ENST00000565023 S100GP29377 79 aa10.48□□□□□ -0.73
VPS9D1-204ENST00000565023 POU2AF1Q16633 256 aa10.48□□□□□ -0.73
VPS9D1-204ENST00000565023 SCGB2B2Q4G0G5 96 aa10.48□□□□□ -0.73
VPS9D1-204ENST00000565023 C19orf35Q6ZS72 473 aa10.48□□□□□ -0.73
VPS9D1-204ENST00000565023 ZNF429Q86V71 674 aa10.48□□□□□ -0.73
VPS9D1-204ENST00000565023 PUSL1Q8N0Z8 303 aaKnown RBP10.48□□□□□ -0.73
VPS9D1-204ENST00000565023 VSTM2AQ8TAG5 236 aa10.48□□□□□ -0.73
VPS9D1-204ENST00000565023 TMEM68Q96MH6 324 aa10.48□□□□□ -0.73
VPS9D1-204ENST00000565023 OR4C12Q96R67 309 aa10.48□□□□□ -0.73
VPS9D1-204ENST00000565023 ASCL2Q99929 193 aa10.48□□□□□ -0.73
VPS9D1-204ENST00000565023 AIFM2Q9BRQ8 373 aa10.48□□□□□ -0.73
VPS9D1-204ENST00000565023 SRRQ9GZT4 340 aa10.48□□□□□ -0.73
VPS9D1-204ENST00000565023 PLEKHA2Q9HB19 425 aa10.48□□□□□ -0.73
VPS9D1-204ENST00000565023 RANGRFQ9HD47 186 aaPredicted RBP10.48□□□□□ -0.73
VPS9D1-204ENST00000565023 SLC2A9Q9NRM0 540 aa10.48□□□□□ -0.73
VPS9D1-204ENST00000565023 SLC2A8Q9NY64 477 aa10.48□□□□□ -0.73
VPS9D1-204ENST00000565023 RBMXL2O75526 392 aaKnown RBP10.47□□□□□ -0.73
VPS9D1-204ENST00000565023 OR2A4O95047 310 aa10.47□□□□□ -0.73
VPS9D1-204ENST00000565023 PGAM2P15259 253 aa10.47□□□□□ -0.73
VPS9D1-204ENST00000565023 NQO2P16083 231 aa10.47□□□□□ -0.73
VPS9D1-204ENST00000565023 SPNP16150 400 aa10.47□□□□□ -0.73
VPS9D1-204ENST00000565023 RPL27AP46776 148 aaKnown RBP10.47□□□□□ -0.73
VPS9D1-204ENST00000565023 INSL3P51460 131 aa10.47□□□□□ -0.73
VPS9D1-204ENST00000565023 PPP5CP53041 499 aa10.47□□□□□ -0.73
VPS9D1-204ENST00000565023 TAS2R31P59538 309 aa10.47□□□□□ -0.73
VPS9D1-204ENST00000565023 RND3P61587 244 aa10.47□□□□□ -0.73
VPS9D1-204ENST00000565023 DCTN2Q13561 401 aaKnown RBP10.47□□□□□ -0.73
VPS9D1-204ENST00000565023 KLF9Q13886 244 aaPredicted RBP10.47□□□□□ -0.73
VPS9D1-204ENST00000565023 ZNF585BQ52M93 769 aa10.47□□□□□ -0.73
VPS9D1-204ENST00000565023 ACSM6Q6P461 480 aa10.47□□□□□ -0.73
VPS9D1-204ENST00000565023 TBC1D26Q86UD7 250 aa10.47□□□□□ -0.73
VPS9D1-204ENST00000565023 ADAD2Q8NCV1 583 aaKnown RBP10.47□□□□□ -0.73
VPS9D1-204ENST00000565023 TMEM167AQ8TBQ9 72 aa10.47□□□□□ -0.73
VPS9D1-204ENST00000565023 ZFAND1Q8TCF1 268 aa10.47□□□□□ -0.73
VPS9D1-204ENST00000565023 OR2A7Q96R45 310 aa10.47□□□□□ -0.73
VPS9D1-204ENST00000565023 PRRT1Q99946 306 aa10.47□□□□□ -0.73
VPS9D1-204ENST00000565023 B9D2Q9BPU9 175 aa10.47□□□□□ -0.73
VPS9D1-204ENST00000565023 FAM212BQ9NTI7 297 aaPredicted RBP10.47□□□□□ -0.73
VPS9D1-204ENST00000565023 COMMD9Q9P000 198 aa10.47□□□□□ -0.73
VPS9D1-204ENST00000565023 OR2J3O76001 311 aa10.46□□□□□ -0.73
VPS9D1-204ENST00000565023 KBTBD11O94819 623 aa10.46□□□□□ -0.73
VPS9D1-204ENST00000565023 S1PR2O95136 353 aa10.46□□□□□ -0.73
VPS9D1-204ENST00000565023 IL6RP08887 468 aaPredicted RBP10.46□□□□□ -0.73
VPS9D1-204ENST00000565023 PI3P19957 117 aa10.46□□□□□ -0.73
VPS9D1-204ENST00000565023 AP3S2P59780 193 aa10.46□□□□□ -0.73
VPS9D1-204ENST00000565023 RHOGP84095 191 aa10.46□□□□□ -0.73
VPS9D1-204ENST00000565023 ZNF45Q02386 682 aa10.46□□□□□ -0.73
VPS9D1-204ENST00000565023 SURF2Q15527 256 aaPredicted RBP10.46□□□□□ -0.73
VPS9D1-204ENST00000565023 CNPY1Q3B7I2 92 aa10.46□□□□□ -0.73
VPS9D1-204ENST00000565023 LINC00299Q6ZSB3 139 aa10.46□□□□□ -0.73
VPS9D1-204ENST00000565023 GDPD1Q8N9F7 314 aa10.46□□□□□ -0.73
VPS9D1-204ENST00000565023 OR51S1Q8NGJ8 323 aa10.46□□□□□ -0.73
VPS9D1-204ENST00000565023 OR13C8Q8NGS7 320 aa10.46□□□□□ -0.73
VPS9D1-204ENST00000565023 MARCH1Q8TCQ1 289 aa10.46□□□□□ -0.73
VPS9D1-204ENST00000565023 DEDD2Q8WXF8 326 aa10.46□□□□□ -0.73
VPS9D1-204ENST00000565023 SPIN2AQ99865 258 aa10.46□□□□□ -0.73
VPS9D1-204ENST00000565023 SPIN2BQ9BPZ2 258 aa10.46□□□□□ -0.73
VPS9D1-204ENST00000565023 ELOVL1Q9BW60 279 aa10.46□□□□□ -0.73
VPS9D1-204ENST00000565023 HRASLSQ9HDD0 168 aa10.46□□□□□ -0.73
VPS9D1-204ENST00000565023 AKIP1Q9NQ31 210 aa10.46□□□□□ -0.73
VPS9D1-204ENST00000565023 BATF3Q9NR55 127 aa10.46□□□□□ -0.73
VPS9D1-204ENST00000565023 BET1LQ9NYM9 111 aa10.46□□□□□ -0.73
VPS9D1-204ENST00000565023 PEF1Q9UBV8 284 aaKnown RBP10.46□□□□□ -0.73
VPS9D1-204ENST00000565023 LSM4Q9Y4Z0 139 aaKnown RBP10.46□□□□□ -0.73
VPS9D1-204ENST00000565023 E7EUB6 86 aa10.45□□□□□ -0.74
VPS9D1-204ENST00000565023 REG1AP05451 166 aa10.45□□□□□ -0.74
VPS9D1-204ENST00000565023 CTSDP07339 412 aaPredicted RBP10.45□□□□□ -0.74
VPS9D1-204ENST00000565023 ZP3P21754 424 aa10.45□□□□□ -0.74
VPS9D1-204ENST00000565023 LPAR6P43657 344 aa10.45□□□□□ -0.74
VPS9D1-204ENST00000565023 PIGPP57054 158 aa10.45□□□□□ -0.74
VPS9D1-204ENST00000565023 SYNJ2BPP57105 145 aa10.45□□□□□ -0.74
VPS9D1-204ENST00000565023 EXOSC2Q13868 293 aaKnown RBP10.45□□□□□ -0.74
VPS9D1-204ENST00000565023 OR4A47Q6IF82 309 aa10.45□□□□□ -0.74
VPS9D1-204ENST00000565023 CADM3Q8N126 398 aa10.45□□□□□ -0.74
VPS9D1-204ENST00000565023 TOMM5Q8N4H5 51 aa10.45□□□□□ -0.74
VPS9D1-204ENST00000565023 OR4A5Q8NH83 315 aa10.45□□□□□ -0.74
VPS9D1-204ENST00000565023 USMG5Q96IX5 58 aa10.45□□□□□ -0.74
VPS9D1-204ENST00000565023 SDHCQ99643 169 aaPredicted RBP10.45□□□□□ -0.74
VPS9D1-204ENST00000565023 SCP2D1Q9UJQ7 156 aa10.45□□□□□ -0.74
VPS9D1-204ENST00000565023 S4R3C0 116 aa10.45□□□□□ -0.74
VPS9D1-204ENST00000565023 EPPK1P58107 5090 aaKnown RBP10.45□□□□□ -0.74
VPS9D1-204ENST00000565023 TRAV3A0A0B4J244 114 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms