RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 YPEL3P61236 119 aaPredicted RBP17.03■□□□□ 0.32
MAP1LC3B-206ENST00000564844 PAFAH1B2P68402 229 aa17.03■□□□□ 0.32
MAP1LC3B-206ENST00000564844 PQLC2Q6ZP29 291 aa17.03■□□□□ 0.32
MAP1LC3B-206ENST00000564844 IL36BQ9NZH7 164 aa17.03■□□□□ 0.32
MAP1LC3B-206ENST00000564844 RPL39P5Q59GN2 51 aa17.03■□□□□ 0.32
MAP1LC3B-206ENST00000564844 COL5A1-AS1Q5SY13 56 aa17.03■□□□□ 0.32
MAP1LC3B-206ENST00000564844 UNQ5815/PRO19632Q6UWF5 114 aa17.03■□□□□ 0.32
MAP1LC3B-206ENST00000564844 MOB3BQ86TA1 216 aa17.03■□□□□ 0.32
MAP1LC3B-206ENST00000564844 SSBP3Q9BWW4 388 aaPredicted RBP17.03■□□□□ 0.32
MAP1LC3B-206ENST00000564844 DEFB127Q9H1M4 99 aa17.03■□□□□ 0.32
MAP1LC3B-206ENST00000564844 SIT1Q9Y3P8 196 aa17.03■□□□□ 0.32
MAP1LC3B-206ENST00000564844 WIPI2Q9Y4P8 454 aa17.03■□□□□ 0.32
MAP1LC3B-206ENST00000564844 RANP62826 216 aaKnown RBP17.02■□□□□ 0.32
MAP1LC3B-206ENST00000564844 IL11RAQ14626 422 aa17.02■□□□□ 0.32
MAP1LC3B-206ENST00000564844 LINC00596Q86U02 117 aa17.02■□□□□ 0.32
MAP1LC3B-206ENST00000564844 TDHQ8IZJ6 230 aa17.02■□□□□ 0.32
MAP1LC3B-206ENST00000564844 OR4A16Q8NH70 328 aa17.02■□□□□ 0.32
MAP1LC3B-206ENST00000564844 FAM216AQ8WUB2 273 aa17.02■□□□□ 0.32
MAP1LC3B-206ENST00000564844 OR5G3P0C626 314 aa17.02■□□□□ 0.32
MAP1LC3B-206ENST00000564844 SRIP30626 198 aa17.02■□□□□ 0.32
MAP1LC3B-206ENST00000564844 ARR3P36575 388 aa17.02■□□□□ 0.32
MAP1LC3B-206ENST00000564844 MOB1BQ7L9L4 216 aa17.02■□□□□ 0.32
MAP1LC3B-206ENST00000564844 RNASE8Q8TDE3 154 aaKnown RBP17.02■□□□□ 0.32
MAP1LC3B-206ENST00000564844 MBNL3Q9NUK0 354 aaKnown RBP17.02■□□□□ 0.32
MAP1LC3B-206ENST00000564844 ZNF586Q9NXT0 402 aa17.02■□□□□ 0.32
MAP1LC3B-206ENST00000564844 TMEM30CPA0ZSE6 113 aa17.02■□□□□ 0.31
MAP1LC3B-206ENST00000564844 GPX1P07203 203 aa17.02■□□□□ 0.31
MAP1LC3B-206ENST00000564844 PTTG1IPP53801 180 aa17.02■□□□□ 0.31
MAP1LC3B-206ENST00000564844 CLDN18P56856 261 aa17.02■□□□□ 0.31
MAP1LC3B-206ENST00000564844 UTF1Q5T230 341 aa17.02■□□□□ 0.31
MAP1LC3B-206ENST00000564844 TIPARPQ7Z3E1 657 aaKnown RBP17.02■□□□□ 0.31
MAP1LC3B-206ENST00000564844 SLC35E1Q96K37 410 aa17.02■□□□□ 0.31
MAP1LC3B-206ENST00000564844 GGTLC1Q9BX51 225 aa17.02■□□□□ 0.31
MAP1LC3B-206ENST00000564844 NPIPB11E5RHQ5 1161 aa17.01■□□□□ 0.31
MAP1LC3B-206ENST00000564844 P0C879 139 aa17.01■□□□□ 0.31
MAP1LC3B-206ENST00000564844 FOXF2Q12947 444 aa17.01■□□□□ 0.31
MAP1LC3B-206ENST00000564844 SLC25A40Q8TBP6 338 aa17.01■□□□□ 0.31
MAP1LC3B-206ENST00000564844 COQ2Q96H96 371 aa17.01■□□□□ 0.31
MAP1LC3B-206ENST00000564844 TNRC6AQ8NDV7 1962 aaKnown RBP17.01■□□□□ 0.31
MAP1LC3B-206ENST00000564844 PCNX2A6NKB5 2137 aa17.01■□□□□ 0.31
MAP1LC3B-206ENST00000564844 CD99P14209 185 aa17.01■□□□□ 0.31
MAP1LC3B-206ENST00000564844 HNRNPA3P51991 378 aaKnown RBP17.01■□□□□ 0.31
MAP1LC3B-206ENST00000564844 RPEL1Q2QD12 228 aa17.01■□□□□ 0.31
MAP1LC3B-206ENST00000564844 K7ESF4 209 aa17■□□□□ 0.31
MAP1LC3B-206ENST00000564844 LYZL6O75951 148 aa17■□□□□ 0.31
MAP1LC3B-206ENST00000564844 GCHFRP30047 84 aa17■□□□□ 0.31
MAP1LC3B-206ENST00000564844 RNF151Q2KHN1 245 aa17■□□□□ 0.31
MAP1LC3B-206ENST00000564844 PKIBQ9C010 78 aa17■□□□□ 0.31
MAP1LC3B-206ENST00000564844 GNG12Q9UBI6 72 aa17■□□□□ 0.31
MAP1LC3B-206ENST00000564844 DMXL1Q9Y485 3027 aa17■□□□□ 0.31
MAP1LC3B-206ENST00000564844 TTC28Q96AY4 2481 aa17■□□□□ 0.31
MAP1LC3B-206ENST00000564844 M0R1X1 148 aa17■□□□□ 0.31
MAP1LC3B-206ENST00000564844 RAB29O14966 203 aa17■□□□□ 0.31
MAP1LC3B-206ENST00000564844 STAG3L2P0CL84 134 aa17■□□□□ 0.31
MAP1LC3B-206ENST00000564844 STAG3L3P0CL85 134 aa17■□□□□ 0.31
MAP1LC3B-206ENST00000564844 MIR17HGQ75NE6 70 aa17■□□□□ 0.31
MAP1LC3B-206ENST00000564844 LGALS4P56470 323 aa17■□□□□ 0.31
MAP1LC3B-206ENST00000564844 PSG5Q15238 335 aa17■□□□□ 0.31
MAP1LC3B-206ENST00000564844 CENPWQ5EE01 88 aa17■□□□□ 0.31
MAP1LC3B-206ENST00000564844 ST6GALNAC6Q969X2 333 aa17■□□□□ 0.31
MAP1LC3B-206ENST00000564844 PLXNB1O43157 2135 aa16.99■□□□□ 0.31
MAP1LC3B-206ENST00000564844 A8MXE2 369 aa16.99■□□□□ 0.31
MAP1LC3B-206ENST00000564844 NDUFB8O95169 186 aa16.99■□□□□ 0.31
MAP1LC3B-206ENST00000564844 CXorf1O96002 111 aa16.99■□□□□ 0.31
MAP1LC3B-206ENST00000564844 MPV17P39210 176 aa16.99■□□□□ 0.31
MAP1LC3B-206ENST00000564844 ZNF83P51522 516 aa16.99■□□□□ 0.31
MAP1LC3B-206ENST00000564844 EAF1Q96JC9 268 aaPredicted RBP16.99■□□□□ 0.31
MAP1LC3B-206ENST00000564844 POLDIP2Q9Y2S7 368 aa16.99■□□□□ 0.31
MAP1LC3B-206ENST00000564844 CCL25O15444 150 aa16.99■□□□□ 0.31
MAP1LC3B-206ENST00000564844 PROP1O75360 226 aa16.99■□□□□ 0.31
MAP1LC3B-206ENST00000564844 FABP6P51161 128 aa16.99■□□□□ 0.31
MAP1LC3B-206ENST00000564844 SELENOTP62341 195 aa16.99■□□□□ 0.31
MAP1LC3B-206ENST00000564844 EFNB3Q15768 340 aa16.99■□□□□ 0.31
MAP1LC3B-206ENST00000564844 HSD17B10Q99714 261 aaKnown RBP16.99■□□□□ 0.31
MAP1LC3B-206ENST00000564844 BOKQ9UMX3 212 aaPredicted RBP16.99■□□□□ 0.31
MAP1LC3B-206ENST00000564844 AGFG2O95081 481 aa16.98■□□□□ 0.31
MAP1LC3B-206ENST00000564844 HES3Q5TGS1 186 aa16.98■□□□□ 0.31
MAP1LC3B-206ENST00000564844 STPG3Q8N7X2 389 aa16.98■□□□□ 0.31
MAP1LC3B-206ENST00000564844 Q8TCH9 128 aa16.98■□□□□ 0.31
MAP1LC3B-206ENST00000564844 A0A1W2PS18 150 aa16.98■□□□□ 0.31
MAP1LC3B-206ENST00000564844 C20orf202A1L168 122 aa16.98■□□□□ 0.31
MAP1LC3B-206ENST00000564844 SS18L1O75177 396 aaPredicted RBP16.98■□□□□ 0.31
MAP1LC3B-206ENST00000564844 HYPMO75409 117 aa16.98■□□□□ 0.31
MAP1LC3B-206ENST00000564844 GPR12P47775 334 aa16.98■□□□□ 0.31
MAP1LC3B-206ENST00000564844 TMEM45BQ96B21 275 aa16.98■□□□□ 0.31
MAP1LC3B-206ENST00000564844 LINC00479Q96M42 142 aa16.98■□□□□ 0.31
MAP1LC3B-206ENST00000564844 PLCE1Q9P212 2302 aa16.98■□□□□ 0.31
MAP1LC3B-206ENST00000564844 PIEZO2Q9H5I5 2752 aa16.98■□□□□ 0.31
MAP1LC3B-206ENST00000564844 C3orf79P0CE67 100 aa16.98■□□□□ 0.31
MAP1LC3B-206ENST00000564844 IGFBP2P18065 325 aa16.98■□□□□ 0.31
MAP1LC3B-206ENST00000564844 ERVK11-1P61568 191 aa16.98■□□□□ 0.31
MAP1LC3B-206ENST00000564844 Q8N976 141 aa16.98■□□□□ 0.31
MAP1LC3B-206ENST00000564844 SGK494Q96LW2 274 aa16.98■□□□□ 0.31
MAP1LC3B-206ENST00000564844 RNF24Q9Y225 148 aa16.98■□□□□ 0.31
MAP1LC3B-206ENST00000564844 ZFP30Q9Y2G7 519 aa16.98■□□□□ 0.31
MAP1LC3B-206ENST00000564844 OR7C2O60412 319 aa16.97■□□□□ 0.31
MAP1LC3B-206ENST00000564844 GNG4P50150 75 aa16.97■□□□□ 0.31
MAP1LC3B-206ENST00000564844 MLANAQ16655 118 aa16.97■□□□□ 0.31
MAP1LC3B-206ENST00000564844 PCED1AQ9H1Q7 454 aa16.97■□□□□ 0.31
MAP1LC3B-206ENST00000564844 ADGRG4Q8IZF6 3080 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms