RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 OR10J3Q5JRS4 329 aa6.32□□□□□ -1.4
ATXN3-249ENST00000564606 IGFL3Q6UXB1 125 aa6.32□□□□□ -1.4
ATXN3-249ENST00000564606 TMEM108Q6UXF1 575 aa6.32□□□□□ -1.4
ATXN3-249ENST00000564606 MYPOPQ86VE0 399 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-249ENST00000564606 GBGT1Q8N5D6 347 aa6.32□□□□□ -1.4
ATXN3-249ENST00000564606 CD177Q8N6Q3 437 aa6.32□□□□□ -1.4
ATXN3-249ENST00000564606 NECAP1Q8NC96 275 aa6.32□□□□□ -1.4
ATXN3-249ENST00000564606 NUP37Q8NFH4 326 aa6.32□□□□□ -1.4
ATXN3-249ENST00000564606 RFESDQ8TAC1 157 aa6.32□□□□□ -1.4
ATXN3-249ENST00000564606 CMTM2Q8TAZ6 248 aa6.32□□□□□ -1.4
ATXN3-249ENST00000564606 TMEM37Q8WXS4 190 aa6.32□□□□□ -1.4
ATXN3-249ENST00000564606 EAF1Q96JC9 268 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-249ENST00000564606 OR2V2Q96R30 315 aa6.32□□□□□ -1.4
ATXN3-249ENST00000564606 C2orf88Q9BSF0 95 aa6.32□□□□□ -1.4
ATXN3-249ENST00000564606 COMMD5Q9GZQ3 224 aa6.32□□□□□ -1.4
ATXN3-249ENST00000564606 OSTCQ9NRP0 149 aa6.32□□□□□ -1.4
ATXN3-249ENST00000564606 SLC35D1Q9NTN3 355 aa6.32□□□□□ -1.4
ATXN3-249ENST00000564606 ELOVL5Q9NYP7 299 aa6.32□□□□□ -1.4
ATXN3-249ENST00000564606 DKK4Q9UBT3 224 aa6.32□□□□□ -1.4
ATXN3-249ENST00000564606 LSM4Q9Y4Z0 139 aaKnown RBP6.32□□□□□ -1.4
ATXN3-249ENST00000564606 OR51B2Q9Y5P1 312 aa6.32□□□□□ -1.4
ATXN3-249ENST00000564606 RFNGQ9Y644 331 aa6.32□□□□□ -1.4
ATXN3-249ENST00000564606 LINC00312Q9Y6C7 94 aa6.32□□□□□ -1.4
ATXN3-249ENST00000564606 M0R143 59 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 M0R1B8 84 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 DLL1O00548 723 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 WNT9BO14905 357 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 SCGB1D1O95968 90 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 LHBP01229 141 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 PF4P02776 101 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 CD55P08174 381 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 OR9G9P0C7N8 305 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 C8orf88P0DMB2 117 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 GZMBP10144 247 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 ESDP10768 282 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 CRISP2P16562 243 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 LORP23490 312 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-249ENST00000564606 LOXL3P58215 753 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 ERVFC1-1P60608 527 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 GNB1P62873 340 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 Q0VG73 95 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 GAMTQ14353 236 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 EFNB3Q15768 340 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 HLA-DRB5Q30154 266 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 VMA21Q3ZAQ7 101 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 PDZD11Q5EBL8 140 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 C1orf185Q5T7R7 199 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 OR4A47Q6IF82 309 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 TEX38Q6PEX7 206 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 TOMM20LQ6UXN7 152 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 ZNF826PQ6ZT77 177 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 SSX7Q7RTT5 188 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 PDPNQ86YL7 162 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 STPG3Q8N7X2 389 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 C9orf106Q8NAJ2 232 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 DDB2Q92466 427 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 NEUROG1Q92886 237 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 TMEM186Q96B77 213 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 GUCD1Q96NT3 240 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 MS4A10Q96PG2 267 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 MGST2Q99735 147 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 SAMD10Q9BYL1 202 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 IFI27L2Q9H2X8 130 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 MS4A5Q9H3V2 200 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 PRDM13Q9H4Q3 707 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 MSL2Q9HCI7 577 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 ZNF331Q9NQX6 463 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-249ENST00000564606 ZNF586Q9NXT0 402 aa6.31□□□□□ -1.4
ATXN3-249ENST00000564606 ARID1AO14497 2285 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 IGKV1D-17A0A075B6S4 117 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 IGHV3-43A0A0B4J1X8 118 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 IFITM10A6NMD0 228 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 DEFB108AA8MXU0 73 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 UPK2O00526 184 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 ISLRO14498 428 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 SLC31A2O15432 143 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 SCGB2A1O75556 95 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 CEACAM4O75871 244 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 AGFG2O95081 481 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 CGAP01215 116 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 REG1AP05451 166 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 OR4A8P0C604 315 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 IGHV3-43DP0DP04 118 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 FOSL1P15407 271 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 BRS3P32247 399 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 LGALS7P47929 136 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 CEBPDP49716 269 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-249ENST00000564606 UBE2G2P60604 165 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 RPL15P61313 204 aaKnown RBP6.3□□□□□ -1.4
ATXN3-249ENST00000564606 RPL31P62899 125 aaKnown RBP6.3□□□□□ -1.4
ATXN3-249ENST00000564606 ALKBH6Q3KRA9 238 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 C9orf152Q5JTZ5 239 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 TEX36Q5VZQ5 186 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 VWA1Q6PCB0 445 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 Q6ZR03 302 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 C5orf24Q7Z6I8 188 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 MOGAT3Q86VF5 341 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 BAGE3Q86Y29 109 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 BAGE2Q86Y30 109 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 LYG1Q8N1E2 194 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms