RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 COA4Q9NYJ1 87 aa13.49□□□□□ -0.25
CMTM3-208ENST00000564247 VPREB3Q9UKI3 123 aa13.49□□□□□ -0.25
CMTM3-208ENST00000564247 PRNDQ9UKY0 176 aa13.49□□□□□ -0.25
CMTM3-208ENST00000564247 CXCL3P19876 107 aa13.48□□□□□ -0.25
CMTM3-208ENST00000564247 MAS1LP35410 378 aa13.48□□□□□ -0.25
CMTM3-208ENST00000564247 RPL8P62917 257 aaKnown RBP13.48□□□□□ -0.25
CMTM3-208ENST00000564247 RELBQ01201 579 aa13.48□□□□□ -0.25
CMTM3-208ENST00000564247 FOXL1Q12952 345 aa13.48□□□□□ -0.25
CMTM3-208ENST00000564247 PRSS8Q16651 343 aa13.48□□□□□ -0.25
CMTM3-208ENST00000564247 Q6ZRM9 215 aa13.48□□□□□ -0.25
CMTM3-208ENST00000564247 ZBTB8BQ8NAP8 495 aaPredicted RBP13.48□□□□□ -0.25
CMTM3-208ENST00000564247 OR11H7Q8NGC8 314 aa13.48□□□□□ -0.25
CMTM3-208ENST00000564247 ASB13Q8WXK3 278 aa13.48□□□□□ -0.25
CMTM3-208ENST00000564247 CLCC1Q96S66 551 aa13.48□□□□□ -0.25
CMTM3-208ENST00000564247 CHIAQ9BZP6 476 aa13.48□□□□□ -0.25
CMTM3-208ENST00000564247 ZNF436Q9C0F3 470 aaPredicted RBP13.48□□□□□ -0.25
CMTM3-208ENST00000564247 COMMD5Q9GZQ3 224 aa13.48□□□□□ -0.25
CMTM3-208ENST00000564247 NSG2Q9Y328 171 aa13.48□□□□□ -0.25
CMTM3-208ENST00000564247 TNCP24821 2201 aa13.47□□□□□ -0.25
CMTM3-208ENST00000564247 TRAV3A0A0B4J244 114 aa13.47□□□□□ -0.25
CMTM3-208ENST00000564247 MPTX1A8MV57 137 aa13.47□□□□□ -0.25
CMTM3-208ENST00000564247 HAX1O00165 279 aa13.47□□□□□ -0.25
CMTM3-208ENST00000564247 CNIH1O95406 144 aa13.47□□□□□ -0.25
CMTM3-208ENST00000564247 FGF2P09038 288 aa13.47□□□□□ -0.25
CMTM3-208ENST00000564247 FBLN7Q53RD9 439 aa13.47□□□□□ -0.25
CMTM3-208ENST00000564247 AWAT1Q58HT5 328 aa13.47□□□□□ -0.25
CMTM3-208ENST00000564247 FOXRED2Q8IWF2 684 aa13.47□□□□□ -0.25
CMTM3-208ENST00000564247 Q8N9W7 124 aa13.47□□□□□ -0.25
CMTM3-208ENST00000564247 CHAC2Q8WUX2 184 aa13.47□□□□□ -0.25
CMTM3-208ENST00000564247 NMES1Q9C002 83 aa13.47□□□□□ -0.25
CMTM3-208ENST00000564247 ZNF430Q9H8G1 570 aaPredicted RBP13.47□□□□□ -0.25
CMTM3-208ENST00000564247 OR51B2Q9Y5P1 312 aa13.47□□□□□ -0.25
CMTM3-208ENST00000564247 C15orf61A6NNL5 157 aa13.46□□□□□ -0.25
CMTM3-208ENST00000564247 IFNA17P01571 189 aa13.46□□□□□ -0.25
CMTM3-208ENST00000564247 GNB1P62873 340 aa13.46□□□□□ -0.25
CMTM3-208ENST00000564247 TNXAQ16473 311 aa13.46□□□□□ -0.25
CMTM3-208ENST00000564247 ZNF429Q86V71 674 aa13.46□□□□□ -0.25
CMTM3-208ENST00000564247 FAM71E2Q8N5Q1 922 aa13.46□□□□□ -0.25
CMTM3-208ENST00000564247 C3orf56Q8N813 242 aa13.46□□□□□ -0.25
CMTM3-208ENST00000564247 ZFP57Q9NU63 452 aa13.46□□□□□ -0.25
CMTM3-208ENST00000564247 FOXA2Q9Y261 457 aaPredicted RBP13.46□□□□□ -0.25
CMTM3-208ENST00000564247 FAM90A26D6RGX4 464 aa13.45□□□□□ -0.26
CMTM3-208ENST00000564247 PITX3O75364 302 aa13.45□□□□□ -0.26
CMTM3-208ENST00000564247 MED6O75586 246 aa13.45□□□□□ -0.26
CMTM3-208ENST00000564247 GIPP09681 153 aaPredicted RBP13.45□□□□□ -0.26
CMTM3-208ENST00000564247 NKX2-1P43699 371 aaPredicted RBP13.45□□□□□ -0.26
CMTM3-208ENST00000564247 H2BFSP57053 126 aa13.45□□□□□ -0.26
CMTM3-208ENST00000564247 OR2B8PP59922 312 aa13.45□□□□□ -0.26
CMTM3-208ENST00000564247 HSPE1P61604 102 aaKnown RBP13.45□□□□□ -0.26
CMTM3-208ENST00000564247 PJVKQ0ZLH3 352 aa13.45□□□□□ -0.26
CMTM3-208ENST00000564247 ZNF562Q6V9R5 426 aa13.45□□□□□ -0.26
CMTM3-208ENST00000564247 C5orf56Q8N8D9 126 aa13.45□□□□□ -0.26
CMTM3-208ENST00000564247 OR1L8Q8NGR8 309 aa13.45□□□□□ -0.26
CMTM3-208ENST00000564247 OR52E5Q8NH55 327 aa13.45□□□□□ -0.26
CMTM3-208ENST00000564247 QTRT1Q9BXR0 403 aaKnown RBP13.45□□□□□ -0.26
CMTM3-208ENST00000564247 TPSG1Q9NRR2 321 aa13.45□□□□□ -0.26
CMTM3-208ENST00000564247 TMEM14BQ9NUH8 114 aa13.45□□□□□ -0.26
CMTM3-208ENST00000564247 ZNF257Q9Y2Q1 563 aa13.45□□□□□ -0.26
CMTM3-208ENST00000564247 TEX50A0A1B0GTY4 177 aa13.44□□□□□ -0.26
CMTM3-208ENST00000564247 WRBO00258 174 aa13.44□□□□□ -0.26
CMTM3-208ENST00000564247 FCN1O00602 326 aa13.44□□□□□ -0.26
CMTM3-208ENST00000564247 ST8SIA3O43173 380 aa13.44□□□□□ -0.26
CMTM3-208ENST00000564247 CCNKO75909 580 aa13.44□□□□□ -0.26
CMTM3-208ENST00000564247 SCGB1D2O95969 90 aa13.44□□□□□ -0.26
CMTM3-208ENST00000564247 CA2P00918 260 aa13.44□□□□□ -0.26
CMTM3-208ENST00000564247 HLA-DRB1P01911 266 aa13.44□□□□□ -0.26
CMTM3-208ENST00000564247 SPCS3P61009 180 aa13.44□□□□□ -0.26
CMTM3-208ENST00000564247 RAP2BP61225 183 aa13.44□□□□□ -0.26
CMTM3-208ENST00000564247 CD83Q01151 205 aa13.44□□□□□ -0.26
CMTM3-208ENST00000564247 SRSF4Q08170 494 aaKnown RBP13.44□□□□□ -0.26
CMTM3-208ENST00000564247 AKAP14Q86UN6 197 aa13.44□□□□□ -0.26
CMTM3-208ENST00000564247 OR4D5Q8NGN0 318 aa13.44□□□□□ -0.26
CMTM3-208ENST00000564247 OR5B3Q8NH48 314 aa13.44□□□□□ -0.26
CMTM3-208ENST00000564247 FYTTD1Q96QD9 318 aaKnown RBP13.44□□□□□ -0.26
CMTM3-208ENST00000564247 PLXNB1O43157 2135 aa13.43□□□□□ -0.26
CMTM3-208ENST00000564247 FAM181BA6NEQ2 426 aa13.43□□□□□ -0.26
CMTM3-208ENST00000564247 CHST1O43916 411 aa13.43□□□□□ -0.26
CMTM3-208ENST00000564247 GPR137BO60478 399 aa13.43□□□□□ -0.26
CMTM3-208ENST00000564247 RLN2P04090 185 aa13.43□□□□□ -0.26
CMTM3-208ENST00000564247 RPL27AP46776 148 aaKnown RBP13.43□□□□□ -0.26
CMTM3-208ENST00000564247 ID3Q02535 119 aa13.43□□□□□ -0.26
CMTM3-208ENST00000564247 FXYD3Q14802 87 aa13.43□□□□□ -0.26
CMTM3-208ENST00000564247 AARDQ4LEZ3 155 aa13.43□□□□□ -0.26
CMTM3-208ENST00000564247 CXorf66Q5JRM2 361 aaPredicted RBP13.43□□□□□ -0.26
CMTM3-208ENST00000564247 C9orf152Q5JTZ5 239 aa13.43□□□□□ -0.26
CMTM3-208ENST00000564247 MRPL41Q8IXM3 137 aaKnown RBP13.43□□□□□ -0.26
CMTM3-208ENST00000564247 HINT2Q9BX68 163 aa13.43□□□□□ -0.26
CMTM3-208ENST00000564247 NPFFR1Q9GZQ6 430 aa13.43□□□□□ -0.26
CMTM3-208ENST00000564247 ENY2Q9NPA8 101 aa13.43□□□□□ -0.26
CMTM3-208ENST00000564247 CEBPZOSA8MTT3 80 aa13.42□□□□□ -0.26
CMTM3-208ENST00000564247 NXPH3O95157 252 aa13.42□□□□□ -0.26
CMTM3-208ENST00000564247 OPN1MWP04001 364 aa13.42□□□□□ -0.26
CMTM3-208ENST00000564247 CRYBA1P05813 215 aa13.42□□□□□ -0.26
CMTM3-208ENST00000564247 OPN1MW2P0DN77 364 aa13.42□□□□□ -0.26
CMTM3-208ENST00000564247 OPN1MW3P0DN78 364 aa13.42□□□□□ -0.26
CMTM3-208ENST00000564247 PSMB6P28072 239 aa13.42□□□□□ -0.26
CMTM3-208ENST00000564247 RPL15P61313 204 aaKnown RBP13.42□□□□□ -0.26
CMTM3-208ENST00000564247 CX3CL1P78423 397 aa13.42□□□□□ -0.26
CMTM3-208ENST00000564247 TNFRSF9Q07011 255 aa13.42□□□□□ -0.26
CMTM3-208ENST00000564247 FGL1Q08830 312 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms