RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 WWC2-AS2Q96NR7 200 aa11.36□□□□□ -0.59
SNX29-203ENST00000564111 RSRP1Q9BUV0 290 aa11.36□□□□□ -0.59
SNX29-203ENST00000564111 FXYD6Q9H0Q3 95 aa11.36□□□□□ -0.59
SNX29-203ENST00000564111 TRBV7-1A0A0A6YYK4 115 aa11.35□□□□□ -0.59
SNX29-203ENST00000564111 GGCTO75223 188 aaKnown RBP11.35□□□□□ -0.59
SNX29-203ENST00000564111 GNRHRP30968 328 aa11.35□□□□□ -0.59
SNX29-203ENST00000564111 SSBP1Q04837 148 aaKnown RBP11.35□□□□□ -0.59
SNX29-203ENST00000564111 GPR107Q5VW38 600 aa11.35□□□□□ -0.59
SNX29-203ENST00000564111 ZNF486Q96H40 463 aaPredicted RBP11.35□□□□□ -0.59
SNX29-203ENST00000564111 TMEM140Q9NV12 185 aa11.35□□□□□ -0.59
SNX29-203ENST00000564111 FBXL7Q9UJT9 491 aa11.35□□□□□ -0.59
SNX29-203ENST00000564111 U3KQK5 164 aa11.35□□□□□ -0.59
SNX29-203ENST00000564111 PGLYRP1O75594 196 aaPredicted RBP11.35□□□□□ -0.59
SNX29-203ENST00000564111 SNAPC5O75971 98 aa11.35□□□□□ -0.59
SNX29-203ENST00000564111 IL6RP08887 468 aaPredicted RBP11.35□□□□□ -0.59
SNX29-203ENST00000564111 CTRB1P17538 263 aa11.35□□□□□ -0.59
SNX29-203ENST00000564111 HRH1P35367 487 aa11.35□□□□□ -0.59
SNX29-203ENST00000564111 BRWD1-AS2P59051 145 aa11.35□□□□□ -0.59
SNX29-203ENST00000564111 ZNF45Q02386 682 aa11.35□□□□□ -0.59
SNX29-203ENST00000564111 C15orf32Q32M92 178 aa11.35□□□□□ -0.59
SNX29-203ENST00000564111 CTRB2Q6GPI1 263 aa11.35□□□□□ -0.59
SNX29-203ENST00000564111 VKORC1L1Q8N0U8 176 aa11.35□□□□□ -0.59
SNX29-203ENST00000564111 DGCR14Q96DF8 476 aaKnown RBP11.35□□□□□ -0.59
SNX29-203ENST00000564111 QTRT1Q9BXR0 403 aaKnown RBP11.35□□□□□ -0.59
SNX29-203ENST00000564111 PRNDQ9UKY0 176 aa11.35□□□□□ -0.59
SNX29-203ENST00000564111 A8MZ25 164 aa11.34□□□□□ -0.59
SNX29-203ENST00000564111 LGALS9O00182 355 aa11.34□□□□□ -0.59
SNX29-203ENST00000564111 NOL3O60936 208 aaKnown RBP11.34□□□□□ -0.59
SNX29-203ENST00000564111 ATG12O94817 140 aa11.34□□□□□ -0.59
SNX29-203ENST00000564111 PTHLHP12272 177 aa11.34□□□□□ -0.59
SNX29-203ENST00000564111 DEFA4P12838 97 aa11.34□□□□□ -0.59
SNX29-203ENST00000564111 SYNJ2BPP57105 145 aa11.34□□□□□ -0.59
SNX29-203ENST00000564111 OR2B8PP59922 312 aa11.34□□□□□ -0.59
SNX29-203ENST00000564111 C10orf55Q5SWW7 151 aa11.34□□□□□ -0.59
SNX29-203ENST00000564111 SSX9Q7RTT3 188 aa11.34□□□□□ -0.59
SNX29-203ENST00000564111 ARRDC1Q8N5I2 433 aa11.34□□□□□ -0.59
SNX29-203ENST00000564111 OR1L8Q8NGR8 309 aa11.34□□□□□ -0.59
SNX29-203ENST00000564111 HPGDSO60760 199 aa11.33□□□□□ -0.59
SNX29-203ENST00000564111 RLN1P04808 185 aa11.33□□□□□ -0.59
SNX29-203ENST00000564111 IFNA6P05013 189 aa11.33□□□□□ -0.59
SNX29-203ENST00000564111 TRAPPC2P0DI81 140 aa11.33□□□□□ -0.59
SNX29-203ENST00000564111 TRAPPC2BP0DI82 140 aa11.33□□□□□ -0.59
SNX29-203ENST00000564111 APELAP0DMC3 54 aa11.33□□□□□ -0.59
SNX29-203ENST00000564111 ELK1P19419 428 aa11.33□□□□□ -0.59
SNX29-203ENST00000564111 CTF1Q16619 201 aa11.33□□□□□ -0.59
SNX29-203ENST00000564111 TECRQ9NZ01 308 aaKnown RBP11.33□□□□□ -0.59
SNX29-203ENST00000564111 MARCH11A6NNE9 402 aa11.33□□□□□ -0.6
SNX29-203ENST00000564111 B3GALNT1O75752 331 aa11.33□□□□□ -0.6
SNX29-203ENST00000564111 OR2J3O76001 311 aa11.33□□□□□ -0.6
SNX29-203ENST00000564111 S1PR2O95136 353 aa11.33□□□□□ -0.6
SNX29-203ENST00000564111 RPA2P15927 270 aa11.33□□□□□ -0.6
SNX29-203ENST00000564111 PTBP1P26599 531 aaKnown RBP eCLIP11.33□□□□□ -0.6
SNX29-203ENST00000564111 RFX2P48378 723 aa11.33□□□□□ -0.6
SNX29-203ENST00000564111 ALDH3B2P48448 385 aa11.33□□□□□ -0.6
SNX29-203ENST00000564111 GTSCR1Q86UQ5 136 aa11.33□□□□□ -0.6
SNX29-203ENST00000564111 SNX29P2Q8IUI4 249 aa11.33□□□□□ -0.6
SNX29-203ENST00000564111 PALMDQ9NP74 551 aa11.33□□□□□ -0.6
SNX29-203ENST00000564111 HMX3A6NHT5 357 aa11.32□□□□□ -0.6
SNX29-203ENST00000564111 BMPR1BO00238 502 aa11.32□□□□□ -0.6
SNX29-203ENST00000564111 RND3P61587 244 aa11.32□□□□□ -0.6
SNX29-203ENST00000564111 FAM106AQ4KMX7 169 aa11.32□□□□□ -0.6
SNX29-203ENST00000564111 RNASE10Q5GAN6 216 aaKnown RBP11.32□□□□□ -0.6
SNX29-203ENST00000564111 OR5B3Q8NH48 314 aa11.32□□□□□ -0.6
SNX29-203ENST00000564111 VN1R17PQ8TDU5 208 aa11.32□□□□□ -0.6
SNX29-203ENST00000564111 RAB2BQ8WUD1 216 aa11.32□□□□□ -0.6
SNX29-203ENST00000564111 TMEM56Q96MV1 263 aa11.32□□□□□ -0.6
SNX29-203ENST00000564111 IGLV11-55A0A075B6I3 123 aa11.32□□□□□ -0.6
SNX29-203ENST00000564111 CSN3P07498 182 aa11.32□□□□□ -0.6
SNX29-203ENST00000564111 HLA-DMAP28067 261 aa11.32□□□□□ -0.6
SNX29-203ENST00000564111 LPAR6P43657 344 aa11.32□□□□□ -0.6
SNX29-203ENST00000564111 GPHB5Q86YW7 130 aa11.32□□□□□ -0.6
SNX29-203ENST00000564111 LYSMD2Q8IV50 215 aa11.32□□□□□ -0.6
SNX29-203ENST00000564111 DYNLRB2Q8TF09 96 aa11.32□□□□□ -0.6
SNX29-203ENST00000564111 LSM10Q969L4 123 aaKnown RBP11.32□□□□□ -0.6
SNX29-203ENST00000564111 ZMAT4Q9H898 229 aa11.32□□□□□ -0.6
SNX29-203ENST00000564111 CCDC59Q9P031 241 aaKnown RBP11.32□□□□□ -0.6
SNX29-203ENST00000564111 EXTL2Q9UBQ6 330 aa11.32□□□□□ -0.6
SNX29-203ENST00000564111 FCER2P06734 321 aa11.31□□□□□ -0.6
SNX29-203ENST00000564111 ARL3P36405 182 aa11.31□□□□□ -0.6
SNX29-203ENST00000564111 CCDC71LQ8N9Z2 235 aa11.31□□□□□ -0.6
SNX29-203ENST00000564111 FCAMRQ8WWV6 532 aa11.31□□□□□ -0.6
SNX29-203ENST00000564111 MARC2Q969Z3 335 aa11.31□□□□□ -0.6
SNX29-203ENST00000564111 GAR1Q9NY12 217 aaKnown RBP11.31□□□□□ -0.6
SNX29-203ENST00000564111 TNCP24821 2201 aa11.31□□□□□ -0.6
SNX29-203ENST00000564111 TAS2R19P59542 299 aa11.31□□□□□ -0.6
SNX29-203ENST00000564111 GDPD1Q8N9F7 314 aa11.31□□□□□ -0.6
SNX29-203ENST00000564111 ZFAND1Q8TCF1 268 aa11.31□□□□□ -0.6
SNX29-203ENST00000564111 IGLC7A0M8Q6 106 aa11.3□□□□□ -0.6
SNX29-203ENST00000564111 AREGP15514 252 aa11.3□□□□□ -0.6
SNX29-203ENST00000564111 TMBIM6P55061 237 aa11.3□□□□□ -0.6
SNX29-203ENST00000564111 ELLP55199 621 aaPredicted RBP11.3□□□□□ -0.6
SNX29-203ENST00000564111 MEF2DQ14814 521 aa11.3□□□□□ -0.6
SNX29-203ENST00000564111 TMEM229BQ8NBD8 167 aa11.3□□□□□ -0.6
SNX29-203ENST00000564111 FANCD2OSQ96PS1 177 aa11.3□□□□□ -0.6
SNX29-203ENST00000564111 MTFP1Q9UDX5 166 aa11.3□□□□□ -0.6
SNX29-203ENST00000564111 A8MWP6 167 aa11.29□□□□□ -0.6
SNX29-203ENST00000564111 TRBV12-3P01733 135 aa11.29□□□□□ -0.6
SNX29-203ENST00000564111 PRH1P02810 166 aa11.29□□□□□ -0.6
SNX29-203ENST00000564111 PGAM2P15259 253 aa11.29□□□□□ -0.6
SNX29-203ENST00000564111 C11orf87Q6NUJ2 197 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms