RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 FXYD3Q14802 87 aa12.23□□□□□ -0.45
USB1-208ENST00000563207 MRGPRG-AS1Q2M3A8 158 aa12.23□□□□□ -0.45
USB1-208ENST00000563207 C11orf87Q6NUJ2 197 aa12.23□□□□□ -0.45
USB1-208ENST00000563207 CENPSQ8N2Z9 138 aa12.23□□□□□ -0.45
USB1-208ENST00000563207 ARPC1AQ92747 370 aa12.23□□□□□ -0.45
USB1-208ENST00000563207 TSC22D3Q99576 134 aa12.23□□□□□ -0.45
USB1-208ENST00000563207 TMEM222Q9H0R3 208 aa12.23□□□□□ -0.45
USB1-208ENST00000563207 PARP11Q9NR21 331 aa12.23□□□□□ -0.45
USB1-208ENST00000563207 TMEM140Q9NV12 185 aa12.23□□□□□ -0.45
USB1-208ENST00000563207 UPK2O00526 184 aa12.22□□□□□ -0.45
USB1-208ENST00000563207 ATP6V0E1O15342 81 aa12.22□□□□□ -0.45
USB1-208ENST00000563207 KRASP01116 189 aa12.22□□□□□ -0.45
USB1-208ENST00000563207 OR5AC1P0C628 307 aa12.22□□□□□ -0.45
USB1-208ENST00000563207 AKR1C4P17516 323 aa12.22□□□□□ -0.45
USB1-208ENST00000563207 SLC6A1P30531 599 aa12.22□□□□□ -0.45
USB1-208ENST00000563207 BTCP35070 178 aa12.22□□□□□ -0.45
USB1-208ENST00000563207 RPL8P62917 257 aaKnown RBP12.22□□□□□ -0.45
USB1-208ENST00000563207 SRPXP78539 464 aa12.22□□□□□ -0.45
USB1-208ENST00000563207 PJVKQ0ZLH3 352 aa12.22□□□□□ -0.45
USB1-208ENST00000563207 TRIM16LQ309B1 348 aa12.22□□□□□ -0.45
USB1-208ENST00000563207 TEX38Q6PEX7 206 aa12.22□□□□□ -0.45
USB1-208ENST00000563207 SSX9Q7RTT3 188 aa12.22□□□□□ -0.45
USB1-208ENST00000563207 ADAD2Q8NCV1 583 aaKnown RBP12.22□□□□□ -0.45
USB1-208ENST00000563207 GLYATL2Q8WU03 294 aa12.22□□□□□ -0.45
USB1-208ENST00000563207 TMEM230Q96A57 120 aa12.22□□□□□ -0.45
USB1-208ENST00000563207 RCC1LQ96I51 464 aaKnown RBP12.22□□□□□ -0.45
USB1-208ENST00000563207 SEC22AQ96IW7 307 aa12.22□□□□□ -0.45
USB1-208ENST00000563207 NUBP2Q9Y5Y2 271 aa12.22□□□□□ -0.45
USB1-208ENST00000563207 TRAV41A0A0B4J266 112 aa12.21□□□□□ -0.45
USB1-208ENST00000563207 SNAPC5O75971 98 aa12.21□□□□□ -0.45
USB1-208ENST00000563207 RPLP1P05386 114 aaKnown RBP12.21□□□□□ -0.45
USB1-208ENST00000563207 G6PCP35575 357 aa12.21□□□□□ -0.45
USB1-208ENST00000563207 GNB1P62873 340 aa12.21□□□□□ -0.45
USB1-208ENST00000563207 SSBP2P81877 361 aaPredicted RBP12.21□□□□□ -0.45
USB1-208ENST00000563207 NDPQ00604 133 aa12.21□□□□□ -0.45
USB1-208ENST00000563207 TNXAQ16473 311 aa12.21□□□□□ -0.45
USB1-208ENST00000563207 DEFB136Q30KP8 78 aa12.21□□□□□ -0.45
USB1-208ENST00000563207 DEFB121Q5J5C9 76 aa12.21□□□□□ -0.45
USB1-208ENST00000563207 H2BFWTQ7Z2G1 175 aa12.21□□□□□ -0.45
USB1-208ENST00000563207 TMED4Q7Z7H5 227 aa12.21□□□□□ -0.45
USB1-208ENST00000563207 SLC25A42Q86VD7 318 aa12.21□□□□□ -0.45
USB1-208ENST00000563207 KLHL30-AS1Q8NEE0 82 aa12.21□□□□□ -0.45
USB1-208ENST00000563207 ABHD5Q8WTS1 349 aa12.21□□□□□ -0.45
USB1-208ENST00000563207 IL22RA2Q969J5 263 aa12.21□□□□□ -0.45
USB1-208ENST00000563207 TMEM56Q96MV1 263 aa12.21□□□□□ -0.45
USB1-208ENST00000563207 SPIN2AQ99865 258 aa12.21□□□□□ -0.45
USB1-208ENST00000563207 SPIN2BQ9BPZ2 258 aa12.21□□□□□ -0.45
USB1-208ENST00000563207 FKBP11Q9NYL4 201 aa12.21□□□□□ -0.45
USB1-208ENST00000563207 TMEM56-RWDD3S4R434 201 aa12.21□□□□□ -0.45
USB1-208ENST00000563207 FAM240BA0A1B0GVZ2 78 aa12.2□□□□□ -0.46
USB1-208ENST00000563207 NUDT19A8MXV4 375 aa12.2□□□□□ -0.46
USB1-208ENST00000563207 ARPC1BO15143 372 aaKnown RBP12.2□□□□□ -0.46
USB1-208ENST00000563207 IGKV1-39P01597 117 aa12.2□□□□□ -0.46
USB1-208ENST00000563207 IGHG4P01861 327 aa12.2□□□□□ -0.46
USB1-208ENST00000563207 IGKV1D-39P04432 117 aa12.2□□□□□ -0.46
USB1-208ENST00000563207 ELANEP08246 267 aa12.2□□□□□ -0.46
USB1-208ENST00000563207 EGR2P11161 476 aaPredicted RBP12.2□□□□□ -0.46
USB1-208ENST00000563207 HLA-GP17693 338 aa12.2□□□□□ -0.46
USB1-208ENST00000563207 PPIFP30405 207 aaKnown RBP12.2□□□□□ -0.46
USB1-208ENST00000563207 DEFA1P59665 94 aa12.2□□□□□ -0.46
USB1-208ENST00000563207 DEFA3P59666 94 aa12.2□□□□□ -0.46
USB1-208ENST00000563207 SUPT4H1P63272 117 aaKnown RBP12.2□□□□□ -0.46
USB1-208ENST00000563207 CFHR3Q02985 330 aa12.2□□□□□ -0.46
USB1-208ENST00000563207 EGFEM1PQ0D2K5 195 aa12.2□□□□□ -0.46
USB1-208ENST00000563207 SP6Q3SY56 376 aa12.2□□□□□ -0.46
USB1-208ENST00000563207 THOC7Q6I9Y2 204 aaKnown RBP12.2□□□□□ -0.46
USB1-208ENST00000563207 FAM219AQ8IW50 185 aa12.2□□□□□ -0.46
USB1-208ENST00000563207 MINDY2Q8NBR6 621 aa12.2□□□□□ -0.46
USB1-208ENST00000563207 SRSF12Q8WXF0 261 aaKnown RBP12.2□□□□□ -0.46
USB1-208ENST00000563207 RBPMSQ93062 196 aaKnown RBP12.2□□□□□ -0.46
USB1-208ENST00000563207 RAX2Q96IS3 184 aa12.2□□□□□ -0.46
USB1-208ENST00000563207 P2RX4Q99571 388 aa12.2□□□□□ -0.46
USB1-208ENST00000563207 PRNDQ9UKY0 176 aa12.2□□□□□ -0.46
USB1-208ENST00000563207 TBC1D24Q9ULP9 559 aa12.2□□□□□ -0.46
USB1-208ENST00000563207 TCRBP04435 133 aa12.19□□□□□ -0.46
USB1-208ENST00000563207 RPL27AP46776 148 aaKnown RBP12.19□□□□□ -0.46
USB1-208ENST00000563207 AKR1C2P52895 323 aa12.19□□□□□ -0.46
USB1-208ENST00000563207 FOXE3Q13461 319 aa12.19□□□□□ -0.46
USB1-208ENST00000563207 TMEM187Q14656 261 aa12.19□□□□□ -0.46
USB1-208ENST00000563207 C19orf54Q5BKX5 351 aa12.19□□□□□ -0.46
USB1-208ENST00000563207 ZNF695Q8IW36 515 aa12.19□□□□□ -0.46
USB1-208ENST00000563207 RNF152Q8N8N0 203 aa12.19□□□□□ -0.46
USB1-208ENST00000563207 OR5M8Q8NGP6 311 aa12.19□□□□□ -0.46
USB1-208ENST00000563207 GRPEL2Q8TAA5 225 aa12.19□□□□□ -0.46
USB1-208ENST00000563207 RRNAD1Q96FB5 475 aaKnown RBP12.19□□□□□ -0.46
USB1-208ENST00000563207 PHB2Q99623 299 aa12.19□□□□□ -0.46
USB1-208ENST00000563207 SRSF8Q9BRL6 282 aaKnown RBP12.19□□□□□ -0.46
USB1-208ENST00000563207 COMMD5Q9GZQ3 224 aa12.19□□□□□ -0.46
USB1-208ENST00000563207 ALX4Q9H161 411 aaPredicted RBP12.19□□□□□ -0.46
USB1-208ENST00000563207 FOXA2Q9Y261 457 aaPredicted RBP12.19□□□□□ -0.46
USB1-208ENST00000563207 FBXO7Q9Y3I1 522 aa12.19□□□□□ -0.46
USB1-208ENST00000563207 WSB1Q9Y6I7 421 aa12.19□□□□□ -0.46
USB1-208ENST00000563207 MSGN1A6NI15 193 aa12.18□□□□□ -0.46
USB1-208ENST00000563207 IFITM3Q01628 133 aa12.18□□□□□ -0.46
USB1-208ENST00000563207 UNQ5815/PRO19632Q6UWF5 114 aa12.18□□□□□ -0.46
USB1-208ENST00000563207 LGI3Q8N145 548 aa12.18□□□□□ -0.46
USB1-208ENST00000563207 LFNGQ8NES3 379 aa12.18□□□□□ -0.46
USB1-208ENST00000563207 LSM10Q969L4 123 aaKnown RBP12.18□□□□□ -0.46
USB1-208ENST00000563207 ZFP57Q9NU63 452 aa12.18□□□□□ -0.46
USB1-208ENST00000563207 CACFD1Q9UGQ2 172 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms