RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 UNQ9165/PRO28630Q6UXU0 137 aa9.71□□□□□ -0.86
SF3B3-202ENST00000562722 NR2C2APQ86WQ0 139 aa9.71□□□□□ -0.86
SF3B3-202ENST00000562722 SLC38A6Q8IZM9 456 aa9.71□□□□□ -0.86
SF3B3-202ENST00000562722 SPAG16Q8N0X2 631 aa9.71□□□□□ -0.86
SF3B3-202ENST00000562722 OR4A5Q8NH83 315 aa9.71□□□□□ -0.86
SF3B3-202ENST00000562722 MARC2Q969Z3 335 aa9.71□□□□□ -0.86
SF3B3-202ENST00000562722 AIFM2Q9BRQ8 373 aa9.71□□□□□ -0.86
SF3B3-202ENST00000562722 VCX3BQ9H321 246 aa9.71□□□□□ -0.86
SF3B3-202ENST00000562722 CCL28Q9NRJ3 127 aa9.71□□□□□ -0.86
SF3B3-202ENST00000562722 DAPK2Q9UIK4 370 aa9.71□□□□□ -0.86
SF3B3-202ENST00000562722 UFC1Q9Y3C8 167 aa9.71□□□□□ -0.86
SF3B3-202ENST00000562722 IGLV11-55A0A075B6I3 123 aa9.7□□□□□ -0.86
SF3B3-202ENST00000562722 TRAV25A0A0B4J276 109 aa9.7□□□□□ -0.86
SF3B3-202ENST00000562722 A0A0J9YWU9 116 aa9.7□□□□□ -0.86
SF3B3-202ENST00000562722 SSX5O60225 188 aa9.7□□□□□ -0.86
SF3B3-202ENST00000562722 APOC4P55056 127 aa9.7□□□□□ -0.86
SF3B3-202ENST00000562722 BRWD1-AS2P59051 145 aa9.7□□□□□ -0.86
SF3B3-202ENST00000562722 EIF4EBP1Q13541 118 aaPredicted RBP9.7□□□□□ -0.86
SF3B3-202ENST00000562722 TIMM50Q3ZCQ8 353 aa9.7□□□□□ -0.86
SF3B3-202ENST00000562722 PLET1Q6UQ28 207 aa9.7□□□□□ -0.86
SF3B3-202ENST00000562722 OR2C3Q8N628 320 aa9.7□□□□□ -0.86
SF3B3-202ENST00000562722 OR13F1Q8NGS4 319 aa9.7□□□□□ -0.86
SF3B3-202ENST00000562722 LGALS14Q8TCE9 139 aa9.7□□□□□ -0.86
SF3B3-202ENST00000562722 COMMD5Q9GZQ3 224 aa9.7□□□□□ -0.86
SF3B3-202ENST00000562722 BET1LQ9NYM9 111 aa9.7□□□□□ -0.86
SF3B3-202ENST00000562722 THYN1Q9P016 225 aa9.7□□□□□ -0.86
SF3B3-202ENST00000562722 UBQLN2Q9UHD9 624 aa9.7□□□□□ -0.86
SF3B3-202ENST00000562722 NUPR2A6NF83 97 aa9.69□□□□□ -0.86
SF3B3-202ENST00000562722 SULT1C2O00338 296 aa9.69□□□□□ -0.86
SF3B3-202ENST00000562722 CYB5BO43169 146 aa9.69□□□□□ -0.86
SF3B3-202ENST00000562722 PTHLHP12272 177 aa9.69□□□□□ -0.86
SF3B3-202ENST00000562722 GALP22466 123 aa9.69□□□□□ -0.86
SF3B3-202ENST00000562722 PSMB9P28065 219 aa9.69□□□□□ -0.86
SF3B3-202ENST00000562722 FCGR2CP31995 323 aa9.69□□□□□ -0.86
SF3B3-202ENST00000562722 HSPA13P48723 471 aa9.69□□□□□ -0.86
SF3B3-202ENST00000562722 FXYD4P59646 89 aa9.69□□□□□ -0.86
SF3B3-202ENST00000562722 OR2B8PP59922 312 aa9.69□□□□□ -0.86
SF3B3-202ENST00000562722 CATR1Q13166 79 aa9.69□□□□□ -0.86
SF3B3-202ENST00000562722 IZUMO2Q6UXV1 221 aa9.69□□□□□ -0.86
SF3B3-202ENST00000562722 BEST4Q8NFU0 473 aa9.69□□□□□ -0.86
SF3B3-202ENST00000562722 RHBDL2Q9NX52 303 aa9.69□□□□□ -0.86
SF3B3-202ENST00000562722 MRPL27Q9P0M9 148 aaKnown RBP9.69□□□□□ -0.86
SF3B3-202ENST00000562722 RRP15Q9Y3B9 282 aaKnown RBP9.69□□□□□ -0.86
SF3B3-202ENST00000562722 CGB1A6NKQ9 187 aa9.68□□□□□ -0.86
SF3B3-202ENST00000562722 SPRY2O43597 315 aa9.68□□□□□ -0.86
SF3B3-202ENST00000562722 PPYP01298 95 aa9.68□□□□□ -0.86
SF3B3-202ENST00000562722 FCER2P06734 321 aa9.68□□□□□ -0.86
SF3B3-202ENST00000562722 RPA2P15927 270 aa9.68□□□□□ -0.86
SF3B3-202ENST00000562722 TAS2R31P59538 309 aa9.68□□□□□ -0.86
SF3B3-202ENST00000562722 DEFB135Q30KP9 77 aa9.68□□□□□ -0.86
SF3B3-202ENST00000562722 LYG2Q86SG7 212 aa9.68□□□□□ -0.86
SF3B3-202ENST00000562722 ZBTB34Q8NCN2 500 aa9.68□□□□□ -0.86
SF3B3-202ENST00000562722 DMBX1Q8NFW5 382 aa9.68□□□□□ -0.86
SF3B3-202ENST00000562722 ZNF502Q8TBZ5 544 aa9.68□□□□□ -0.86
SF3B3-202ENST00000562722 SLC5A7Q9GZV3 580 aa9.68□□□□□ -0.86
SF3B3-202ENST00000562722 TXNL4BQ9NX01 149 aaKnown RBP9.68□□□□□ -0.86
SF3B3-202ENST00000562722 TRAV18A0A075B6X5 111 aa9.67□□□□□ -0.86
SF3B3-202ENST00000562722 TRAV3A0A0B4J244 114 aa9.67□□□□□ -0.86
SF3B3-202ENST00000562722 IGLC7A0M8Q6 106 aa9.67□□□□□ -0.86
SF3B3-202ENST00000562722 OR2T8A6NH00 312 aa9.67□□□□□ -0.86
SF3B3-202ENST00000562722 UPK2O00526 184 aa9.67□□□□□ -0.86
SF3B3-202ENST00000562722 HPRT1P00492 218 aa9.67□□□□□ -0.86
SF3B3-202ENST00000562722 C8orf88P0DMB2 117 aa9.67□□□□□ -0.86
SF3B3-202ENST00000562722 NQO2P16083 231 aa9.67□□□□□ -0.86
SF3B3-202ENST00000562722 PTBP1P26599 531 aaKnown RBP eCLIP9.67□□□□□ -0.86
SF3B3-202ENST00000562722 BMI1P35226 326 aa9.67□□□□□ -0.86
SF3B3-202ENST00000562722 ELLP55199 621 aaPredicted RBP9.67□□□□□ -0.86
SF3B3-202ENST00000562722 MSMO1Q15800 293 aa9.67□□□□□ -0.86
SF3B3-202ENST00000562722 KLK9Q2XQG4 91 aa9.67□□□□□ -0.86
SF3B3-202ENST00000562722 AADACL3Q5VUY0 350 aa9.67□□□□□ -0.86
SF3B3-202ENST00000562722 LAMTOR1Q6IAA8 161 aa9.67□□□□□ -0.86
SF3B3-202ENST00000562722 SFXN4Q6P4A7 337 aa9.67□□□□□ -0.86
SF3B3-202ENST00000562722 TPRA1Q86W33 373 aa9.67□□□□□ -0.86
SF3B3-202ENST00000562722 TMEM17Q86X19 198 aa9.67□□□□□ -0.86
SF3B3-202ENST00000562722 GVQW1Q8N7I0 195 aa9.67□□□□□ -0.86
SF3B3-202ENST00000562722 STPG3Q8N7X2 389 aa9.67□□□□□ -0.86
SF3B3-202ENST00000562722 OR51H1Q8NH63 302 aa9.67□□□□□ -0.86
SF3B3-202ENST00000562722 SPAG8Q99932 426 aaPredicted RBP9.67□□□□□ -0.86
SF3B3-202ENST00000562722 C20orf24Q9BUV8 137 aa9.67□□□□□ -0.86
SF3B3-202ENST00000562722 HINT2Q9BX68 163 aa9.67□□□□□ -0.86
SF3B3-202ENST00000562722 QTRT1Q9BXR0 403 aaKnown RBP9.67□□□□□ -0.86
SF3B3-202ENST00000562722 C5orf66Q9H5L9 145 aa9.67□□□□□ -0.86
SF3B3-202ENST00000562722 TMEM140Q9NV12 185 aa9.67□□□□□ -0.86
SF3B3-202ENST00000562722 KLK9Q9UKQ9 250 aa9.67□□□□□ -0.86
SF3B3-202ENST00000562722 SSR3Q9UNL2 185 aa9.67□□□□□ -0.86
SF3B3-202ENST00000562722 TP53TG1Q9Y2A0 90 aa9.67□□□□□ -0.86
SF3B3-202ENST00000562722 KLK5Q9Y337 293 aaPredicted RBP9.67□□□□□ -0.86
SF3B3-202ENST00000562722 IGHV3-21A0A0B4J1V1 117 aa9.66□□□□□ -0.86
SF3B3-202ENST00000562722 RBFOX2O43251 390 aaKnown RBP eCLIP9.66□□□□□ -0.86
SF3B3-202ENST00000562722 TGOLN2O43493 480 aa9.66□□□□□ -0.86
SF3B3-202ENST00000562722 OR13C7P0DN81 318 aa9.66□□□□□ -0.86
SF3B3-202ENST00000562722 FGF9P31371 208 aaPredicted RBP9.66□□□□□ -0.86
SF3B3-202ENST00000562722 ERVK-16P61578 105 aa9.66□□□□□ -0.86
SF3B3-202ENST00000562722 EWSR1Q01844 656 aaKnown RBP eCLIP9.66□□□□□ -0.86
SF3B3-202ENST00000562722 MXD1Q05195 221 aa9.66□□□□□ -0.86
SF3B3-202ENST00000562722 TNFRSF9Q07011 255 aa9.66□□□□□ -0.86
SF3B3-202ENST00000562722 SLC25A24Q6NUK1 477 aa9.66□□□□□ -0.86
SF3B3-202ENST00000562722 CEMP1Q6PRD7 247 aaPredicted RBP9.66□□□□□ -0.86
SF3B3-202ENST00000562722 Q6ZWC4 215 aa9.66□□□□□ -0.86
SF3B3-202ENST00000562722 HOGA1Q86XE5 327 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms