RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 HIST1H1BP16401 226 aaKnown RBP12.49□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 FAM106AQ4KMX7 169 aa12.49□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 BTNL8Q6UX41 500 aa12.49□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 TPRA1Q86W33 373 aa12.49□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 SPARTQ8N0X7 666 aa12.49□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 GVQW1Q8N7I0 195 aa12.49□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 OR13F1Q8NGS4 319 aa12.49□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 SECTM1Q8WVN6 248 aa12.49□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 RHBDL2Q9NX52 303 aa12.49□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 MRPS14O60783 128 aaKnown RBP12.48□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 CLEC3BP05452 202 aa12.48□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 DEFA4P12838 97 aa12.48□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 PSMB9P28065 219 aa12.48□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 FCGR2CP31995 323 aa12.48□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 OR2B8PP59922 312 aa12.48□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 MSMO1Q15800 293 aa12.48□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 TM4SF20Q53R12 229 aa12.48□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 ZNF773Q6PK81 442 aa12.48□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 SPAG16Q8N0X2 631 aa12.48□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 BEST4Q8NFU0 473 aa12.48□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 OR52B4Q8NGK2 314 aa12.48□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 OR5H6Q8NGV6 325 aa12.48□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 OR4A5Q8NH83 315 aa12.48□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 SLC25A38Q96DW6 304 aa12.48□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 RAB26Q9ULW5 256 aa12.48□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 TRBV7-1A0A0A6YYK4 115 aa12.47□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 TRAV3A0A0B4J244 114 aa12.47□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 IGLC7A0M8Q6 106 aa12.47□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 SULT1C2O00338 296 aa12.47□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 PPYP01298 95 aa12.47□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 ARPC4P59998 168 aa12.47□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 CXorf58Q96LI9 332 aa12.47□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 OVOL2Q9BRP0 275 aa12.47□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 GGTLC1Q9BX51 225 aa12.47□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 HRASLSQ9HDD0 168 aa12.47□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 FRAS1Q86XX4 4008 aa12.46□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 TRAV18A0A075B6X5 111 aa12.46□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 RBFOX2O43251 390 aaKnown RBP eCLIP12.46□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 CLEC2LP0C7M8 214 aa12.46□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 C8orf88P0DMB2 117 aa12.46□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 GPR183P32249 361 aa12.46□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 SDC2P34741 201 aa12.46□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 HOGA1Q86XE5 327 aa12.46□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 ZNF502Q8TBZ5 544 aa12.46□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 SSR3Q9UNL2 185 aa12.46□□□□□ -0.41
VPS9D1-AS1-201ENST00000562298 LOC102724200A0A096LPH7 203 aaPredicted RBP12.45□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 IGHV3-35A0A0C4DH35 117 aa12.45□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 UPK2O00526 184 aa12.45□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 FCER2P06734 321 aa12.45□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 TAS2R31P59538 309 aa12.45□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 MXD1Q05195 221 aa12.45□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 POU2AF1Q16633 256 aa12.45□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 ZNF585BQ52M93 769 aa12.45□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 ZNF818PQ6ZRF7 136 aa12.45□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 ZBTB34Q8NCN2 500 aa12.45□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 SLC5A7Q9GZV3 580 aa12.45□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 RNF167Q9H6Y7 350 aa12.45□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 HPRT1P00492 218 aa12.44□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 NQO2P16083 231 aa12.44□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 SCAND1P57086 179 aa12.44□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 FXYD4P59646 89 aa12.44□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 ANKRD55Q3KP44 614 aa12.44□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 OR10W1Q8NGF6 305 aa12.44□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 FCGR1BQ92637 280 aa12.44□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 MARC2Q969Z3 335 aa12.44□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 AIFM2Q9BRQ8 373 aa12.44□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 ZNF436Q9C0F3 470 aaPredicted RBP12.44□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 TMEM140Q9NV12 185 aa12.44□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 MRPL27Q9P0M9 148 aaKnown RBP12.44□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 ETV7Q9Y603 341 aa12.44□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 TRAV25A0A0B4J276 109 aa12.43□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 S1PR2O95136 353 aa12.43□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 PTBP1P26599 531 aaKnown RBP eCLIP12.43□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 EWSR1Q01844 656 aaKnown RBP eCLIP12.43□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 CATR1Q13166 79 aa12.43□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 PLET1Q6UQ28 207 aa12.43□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 RBPMS2Q6ZRY4 209 aaKnown RBP12.43□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 OR1L6Q8NGR2 347 aa12.43□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 OR51H1Q8NH63 302 aa12.43□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 LINC00476Q8WZB0 136 aa12.43□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 SRSF8Q9BRL6 282 aaKnown RBP12.43□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 COMMD5Q9GZQ3 224 aa12.43□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 AUNIPQ9H7T9 357 aa12.43□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 UFC1Q9Y3C8 167 aa12.43□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 A0A0A6YYH2 397 aa12.42□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 A6NJ64 397 aa12.42□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 TGOLN2O43493 480 aa12.42□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 RPA2P15927 270 aa12.42□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 ELLP55199 621 aaPredicted RBP12.42□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 WT1-ASQ06250 92 aa12.42□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 IDNKQ5T6J7 187 aa12.42□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 TMEM17Q86X19 198 aa12.42□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 OR2C3Q8N628 320 aa12.42□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 DMBX1Q8NFW5 382 aa12.42□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 OR5AP2Q8NGF4 316 aa12.42□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 GIMAP1Q8WWP7 306 aa12.42□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 TMEM190Q8WZ59 177 aa12.42□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 QTRT1Q9BXR0 403 aaKnown RBP12.42□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 PLEKHA2Q9HB19 425 aa12.42□□□□□ -0.42
VPS9D1-AS1-201ENST00000562298 THYN1Q9P016 225 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms