RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 TUBA4BQ9H853 241 aa6.28□□□□□ -1.4
GINS3-204ENST00000561952 PLEKHA3Q9HB20 300 aa6.28□□□□□ -1.4
GINS3-204ENST00000561952 HRASLSQ9HDD0 168 aa6.28□□□□□ -1.4
GINS3-204ENST00000561952 IFT46Q9NQC8 304 aa6.28□□□□□ -1.4
GINS3-204ENST00000561952 ZC4H2Q9NQZ6 224 aa6.28□□□□□ -1.4
GINS3-204ENST00000561952 GAR1Q9NY12 217 aaKnown RBP6.28□□□□□ -1.4
GINS3-204ENST00000561952 ETV7Q9Y603 341 aa6.28□□□□□ -1.4
GINS3-204ENST00000561952 STARD9Q9P2P6 4700 aa6.28□□□□□ -1.4
GINS3-204ENST00000561952 TEX22C9J3V5 150 aa6.27□□□□□ -1.41
GINS3-204ENST00000561952 H0Y980 276 aa6.27□□□□□ -1.41
GINS3-204ENST00000561952 PPYP01298 95 aa6.27□□□□□ -1.41
GINS3-204ENST00000561952 IL6RP08887 468 aaPredicted RBP6.27□□□□□ -1.41
GINS3-204ENST00000561952 RORCP51449 518 aa6.27□□□□□ -1.41
GINS3-204ENST00000561952 PPP5CP53041 499 aa6.27□□□□□ -1.41
GINS3-204ENST00000561952 BRWD1-AS2P59051 145 aa6.27□□□□□ -1.41
GINS3-204ENST00000561952 CD81P60033 236 aa6.27□□□□□ -1.41
GINS3-204ENST00000561952 HERV-K104P61576 105 aa6.27□□□□□ -1.41
GINS3-204ENST00000561952 EIF4EBP1Q13541 118 aaPredicted RBP6.27□□□□□ -1.41
GINS3-204ENST00000561952 LCN12Q6JVE5 192 aa6.27□□□□□ -1.41
GINS3-204ENST00000561952 CCDC190Q86UF4 302 aa6.27□□□□□ -1.41
GINS3-204ENST00000561952 SPAG16Q8N0X2 631 aa6.27□□□□□ -1.41
GINS3-204ENST00000561952 VSTM2AQ8TAG5 236 aa6.27□□□□□ -1.41
GINS3-204ENST00000561952 MUC7Q8TAX7 377 aa6.27□□□□□ -1.41
GINS3-204ENST00000561952 CACNG8Q8WXS5 425 aa6.27□□□□□ -1.41
GINS3-204ENST00000561952 SLC25A46Q96AG3 418 aa6.27□□□□□ -1.41
GINS3-204ENST00000561952 WFDC10AQ9H1F0 79 aa6.27□□□□□ -1.41
GINS3-204ENST00000561952 AUNIPQ9H7T9 357 aa6.27□□□□□ -1.41
GINS3-204ENST00000561952 RETNQ9HD89 108 aa6.27□□□□□ -1.41
GINS3-204ENST00000561952 DIABLOQ9NR28 239 aa6.27□□□□□ -1.41
GINS3-204ENST00000561952 PEMTQ9UBM1 199 aa6.27□□□□□ -1.41
GINS3-204ENST00000561952 FBXL7Q9UJT9 491 aa6.27□□□□□ -1.41
GINS3-204ENST00000561952 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.26□□□□□ -1.41
GINS3-204ENST00000561952 TRBV9A0A0B4J1U6 114 aa6.26□□□□□ -1.41
GINS3-204ENST00000561952 TRAV3A0A0B4J244 114 aa6.26□□□□□ -1.41
GINS3-204ENST00000561952 A0A1B0GW64 132 aa6.26□□□□□ -1.41
GINS3-204ENST00000561952 C3orf84H3BNL1 204 aa6.26□□□□□ -1.41
GINS3-204ENST00000561952 S1PR2O95136 353 aa6.26□□□□□ -1.41
GINS3-204ENST00000561952 NDUFB8O95169 186 aa6.26□□□□□ -1.41
GINS3-204ENST00000561952 OR2C1O95371 312 aa6.26□□□□□ -1.41
GINS3-204ENST00000561952 HRASP01112 189 aa6.26□□□□□ -1.41
GINS3-204ENST00000561952 PMP2P02689 132 aa6.26□□□□□ -1.41
GINS3-204ENST00000561952 DEFA4P12838 97 aa6.26□□□□□ -1.41
GINS3-204ENST00000561952 S100A5P33763 92 aa6.26□□□□□ -1.41
GINS3-204ENST00000561952 KIR2DS2P43631 304 aa6.26□□□□□ -1.41
GINS3-204ENST00000561952 RPL8P62917 257 aaKnown RBP6.26□□□□□ -1.41
GINS3-204ENST00000561952 CATR1Q13166 79 aa6.26□□□□□ -1.41
GINS3-204ENST00000561952 GUCA2BQ16661 112 aa6.26□□□□□ -1.41
GINS3-204ENST00000561952 CD300EQ496F6 205 aaPredicted RBP6.26□□□□□ -1.41
GINS3-204ENST00000561952 AADACL3Q5VUY0 350 aa6.26□□□□□ -1.41
GINS3-204ENST00000561952 OR4A47Q6IF82 309 aa6.26□□□□□ -1.41
GINS3-204ENST00000561952 CLEC19AQ6UXS0 136 aa6.26□□□□□ -1.41
GINS3-204ENST00000561952 ZNF66Q6ZN08 573 aa6.26□□□□□ -1.41
GINS3-204ENST00000561952 Q6ZNX1 250 aa6.26□□□□□ -1.41
GINS3-204ENST00000561952 ZNF818PQ6ZRF7 136 aa6.26□□□□□ -1.41
GINS3-204ENST00000561952 SLC25A42Q86VD7 318 aa6.26□□□□□ -1.41
GINS3-204ENST00000561952 HOGA1Q86XE5 327 aa6.26□□□□□ -1.41
GINS3-204ENST00000561952 PUSL1Q8N0Z8 303 aaKnown RBP6.26□□□□□ -1.41
GINS3-204ENST00000561952 Q8N402 240 aa6.26□□□□□ -1.41
GINS3-204ENST00000561952 TTC9CQ8N5M4 171 aa6.26□□□□□ -1.41
GINS3-204ENST00000561952 SAMD12Q8N8I0 201 aa6.26□□□□□ -1.41
GINS3-204ENST00000561952 NECAP1Q8NC96 275 aa6.26□□□□□ -1.41
GINS3-204ENST00000561952 DMBX1Q8NFW5 382 aa6.26□□□□□ -1.41
GINS3-204ENST00000561952 TMEM167AQ8TBQ9 72 aa6.26□□□□□ -1.41
GINS3-204ENST00000561952 FAM110AQ9BQ89 295 aa6.26□□□□□ -1.41
GINS3-204ENST00000561952 EHFQ9NZC4 300 aa6.26□□□□□ -1.41
GINS3-204ENST00000561952 ZNF257Q9Y2Q1 563 aa6.26□□□□□ -1.41
GINS3-204ENST00000561952 IGHV3-35A0A0C4DH35 117 aa6.25□□□□□ -1.41
GINS3-204ENST00000561952 ZNF320A2RRD8 509 aa6.25□□□□□ -1.41
GINS3-204ENST00000561952 MFSD2BA6NFX1 497 aa6.25□□□□□ -1.41
GINS3-204ENST00000561952 NPIPB5A8MRT5 1133 aa6.25□□□□□ -1.41
GINS3-204ENST00000561952 BRI3O95415 125 aa6.25□□□□□ -1.41
GINS3-204ENST00000561952 RLN1P04808 185 aa6.25□□□□□ -1.41
GINS3-204ENST00000561952 CD7P09564 240 aa6.25□□□□□ -1.41
GINS3-204ENST00000561952 ZNF735P0CB33 412 aa6.25□□□□□ -1.41
GINS3-204ENST00000561952 LYL1P12980 280 aa6.25□□□□□ -1.41
GINS3-204ENST00000561952 HLA-GP17693 338 aa6.25□□□□□ -1.41
GINS3-204ENST00000561952 ARL3P36405 182 aa6.25□□□□□ -1.41
GINS3-204ENST00000561952 RFX2P48378 723 aa6.25□□□□□ -1.41
GINS3-204ENST00000561952 SCAND1P57086 179 aa6.25□□□□□ -1.41
GINS3-204ENST00000561952 TAS2R20P59543 309 aa6.25□□□□□ -1.41
GINS3-204ENST00000561952 UBE2NLQ5JXB2 153 aa6.25□□□□□ -1.41
GINS3-204ENST00000561952 TMEM69Q5SWH9 247 aa6.25□□□□□ -1.41
GINS3-204ENST00000561952 CASC10Q5T4H9 136 aa6.25□□□□□ -1.41
GINS3-204ENST00000561952 ADAMTSL5Q6ZMM2 481 aa6.25□□□□□ -1.41
GINS3-204ENST00000561952 KRTAP19-1Q8IUB9 90 aa6.25□□□□□ -1.41
GINS3-204ENST00000561952 CCDC140Q96MF4 163 aa6.25□□□□□ -1.41
GINS3-204ENST00000561952 TM2D3Q9BRN9 247 aa6.25□□□□□ -1.41
GINS3-204ENST00000561952 HINT2Q9BX68 163 aa6.25□□□□□ -1.41
GINS3-204ENST00000561952 TMEM140Q9NV12 185 aa6.25□□□□□ -1.41
GINS3-204ENST00000561952 C19orf73Q9NVV2 129 aa6.25□□□□□ -1.41
GINS3-204ENST00000561952 CSMD3Q7Z407 3707 aa6.25□□□□□ -1.41
GINS3-204ENST00000561952 LYSTQ99698 3801 aa6.24□□□□□ -1.41
GINS3-204ENST00000561952 A0A0A6YYH2 397 aa6.24□□□□□ -1.41
GINS3-204ENST00000561952 IGHV3-21A0A0B4J1V1 117 aa6.24□□□□□ -1.41
GINS3-204ENST00000561952 A0A1B0GVG6 124 aa6.24□□□□□ -1.41
GINS3-204ENST00000561952 A6NJ64 397 aa6.24□□□□□ -1.41
GINS3-204ENST00000561952 C2orf70A6NJV1 201 aa6.24□□□□□ -1.41
GINS3-204ENST00000561952 CGB1A6NKQ9 187 aa6.24□□□□□ -1.41
GINS3-204ENST00000561952 CTDSP2O14595 271 aa6.24□□□□□ -1.41
GINS3-204ENST00000561952 XRCC3O43542 346 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms