RNA–Protein interactions for RNA: ENST00000561393.5

AP4E1-205, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,024 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-205ENST00000561393 DHRS7BQ6IAN0 325 aaPredicted RBP13.55□□□□□ -0.24
AP4E1-205ENST00000561393 CLEC7AQ9BXN2 247 aa13.55□□□□□ -0.24
AP4E1-205ENST00000561393 METTL1Q9UBP6 276 aaKnown RBP13.55□□□□□ -0.24
AP4E1-205ENST00000561393 SSX2Q16385 188 aa13.55□□□□□ -0.24
AP4E1-205ENST00000561393 OR4X1Q8NH49 305 aa13.55□□□□□ -0.24
AP4E1-205ENST00000561393 ZNF320A2RRD8 509 aa13.55□□□□□ -0.24
AP4E1-205ENST00000561393 SNRPEP62304 92 aaKnown RBP13.55□□□□□ -0.24
AP4E1-205ENST00000561393 CCL20P78556 96 aa13.55□□□□□ -0.24
AP4E1-205ENST00000561393 PSMG3Q9BT73 122 aaPredicted RBP13.55□□□□□ -0.24
AP4E1-205ENST00000561393 RPUSD1Q9UJJ7 312 aaKnown RBP13.55□□□□□ -0.24
AP4E1-205ENST00000561393 MPDU1O75352 247 aa13.54□□□□□ -0.24
AP4E1-205ENST00000561393 PLAUP00749 431 aa13.54□□□□□ -0.24
AP4E1-205ENST00000561393 ERVFC1-1P60608 527 aa13.54□□□□□ -0.24
AP4E1-205ENST00000561393 LYZP61626 148 aa13.54□□□□□ -0.24
AP4E1-205ENST00000561393 TECRQ9NZ01 308 aaKnown RBP13.54□□□□□ -0.24
AP4E1-205ENST00000561393 MIOXQ9UGB7 285 aa13.54□□□□□ -0.24
AP4E1-205ENST00000561393 NAT8Q9UHE5 227 aa13.54□□□□□ -0.24
AP4E1-205ENST00000561393 LIPFP07098 398 aa13.54□□□□□ -0.24
AP4E1-205ENST00000561393 USF1P22415 310 aaPredicted RBP13.54□□□□□ -0.24
AP4E1-205ENST00000561393 HTR1DP28221 377 aa13.54□□□□□ -0.24
AP4E1-205ENST00000561393 TMEM30BQ3MIR4 351 aa13.54□□□□□ -0.24
AP4E1-205ENST00000561393 NPCDR1Q9BY65 106 aa13.54□□□□□ -0.24
AP4E1-205ENST00000561393 SMDT1Q9H4I9 107 aa13.54□□□□□ -0.24
AP4E1-205ENST00000561393 NPIPB11E5RHQ5 1161 aa13.54□□□□□ -0.24
AP4E1-205ENST00000561393 TMEM178BH3BS89 294 aa13.54□□□□□ -0.24
AP4E1-205ENST00000561393 TMEM50AO95807 157 aa13.54□□□□□ -0.24
AP4E1-205ENST00000561393 HSPB1P04792 205 aaKnown RBP13.54□□□□□ -0.24
AP4E1-205ENST00000561393 FAM157CP0CG43 387 aa13.54□□□□□ -0.24
AP4E1-205ENST00000561393 LYL1P12980 280 aa13.54□□□□□ -0.24
AP4E1-205ENST00000561393 PNRC1Q12796 327 aaPredicted RBP13.54□□□□□ -0.24
AP4E1-205ENST00000561393 Q56UQ5 140 aa13.54□□□□□ -0.24
AP4E1-205ENST00000561393 S100A12P80511 92 aa13.53□□□□□ -0.24
AP4E1-205ENST00000561393 C11orf53Q8IXP5 236 aa13.53□□□□□ -0.24
AP4E1-205ENST00000561393 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.53□□□□□ -0.24
AP4E1-205ENST00000561393 FAM210BQ96KR6 192 aa13.53□□□□□ -0.24
AP4E1-205ENST00000561393 GAFA1Q96PS6 74 aa13.53□□□□□ -0.24
AP4E1-205ENST00000561393 DMRTA2Q96SC8 542 aa13.53□□□□□ -0.24
AP4E1-205ENST00000561393 HSPB7Q9UBY9 170 aa13.53□□□□□ -0.24
AP4E1-205ENST00000561393 E7EQL1 145 aa13.53□□□□□ -0.24
AP4E1-205ENST00000561393 ZNF880Q6PDB4 577 aa13.53□□□□□ -0.24
AP4E1-205ENST00000561393 MMD2Q8IY49 270 aa13.53□□□□□ -0.24
AP4E1-205ENST00000561393 NUP37Q8NFH4 326 aa13.53□□□□□ -0.24
AP4E1-205ENST00000561393 ZNRD1Q9P1U0 126 aa13.53□□□□□ -0.24
AP4E1-205ENST00000561393 ZNF788Q6ZQV5 615 aa13.53□□□□□ -0.24
AP4E1-205ENST00000561393 TPPP3Q9BW30 176 aa13.53□□□□□ -0.24
AP4E1-205ENST00000561393 LOC105371242A0A075B767 164 aa13.52□□□□□ -0.24
AP4E1-205ENST00000561393 SPINK4O60575 86 aa13.52□□□□□ -0.24
AP4E1-205ENST00000561393 NOTCH2Q04721 2471 aa13.52□□□□□ -0.25
AP4E1-205ENST00000561393 CA7P43166 264 aa13.52□□□□□ -0.25
AP4E1-205ENST00000561393 RND2P52198 227 aa13.52□□□□□ -0.25
AP4E1-205ENST00000561393 OSR1Q8TAX0 266 aaPredicted RBP13.52□□□□□ -0.25
AP4E1-205ENST00000561393 TMUB1Q9BVT8 246 aa13.52□□□□□ -0.25
AP4E1-205ENST00000561393 TRAV3A0A0B4J244 114 aa13.52□□□□□ -0.25
AP4E1-205ENST00000561393 CXorf1O96002 111 aa13.52□□□□□ -0.25
AP4E1-205ENST00000561393 SAA1P0DJI8 122 aaPredicted RBP13.52□□□□□ -0.25
AP4E1-205ENST00000561393 GALR1P47211 349 aa13.52□□□□□ -0.25
AP4E1-205ENST00000561393 LYPD2Q6UXB3 125 aa13.52□□□□□ -0.25
AP4E1-205ENST00000561393 TMEM37Q8WXS4 190 aa13.52□□□□□ -0.25
AP4E1-205ENST00000561393 VSIRQ9H7M9 311 aa13.52□□□□□ -0.25
AP4E1-205ENST00000561393 COA4Q9NYJ1 87 aa13.52□□□□□ -0.25
AP4E1-205ENST00000561393 LINC00869P0C866 280 aa13.51□□□□□ -0.25
AP4E1-205ENST00000561393 CNN1P51911 297 aaKnown RBP13.51□□□□□ -0.25
AP4E1-205ENST00000561393 SPRNQ5BIV9 151 aa13.51□□□□□ -0.25
AP4E1-205ENST00000561393 NDUFB4O95168 129 aa13.51□□□□□ -0.25
AP4E1-205ENST00000561393 LAMA1P25391 3075 aa13.51□□□□□ -0.25
AP4E1-205ENST00000561393 IGKV1-39P01597 117 aa13.51□□□□□ -0.25
AP4E1-205ENST00000561393 IGKV1D-39P04432 117 aa13.51□□□□□ -0.25
AP4E1-205ENST00000561393 RAB5AP20339 215 aa13.51□□□□□ -0.25
AP4E1-205ENST00000561393 SUMO1P63165 101 aaKnown RBP13.51□□□□□ -0.25
AP4E1-205ENST00000561393 ZNF672Q499Z4 452 aaPredicted RBP13.51□□□□□ -0.25
AP4E1-205ENST00000561393 TMEM200BQ69YZ2 307 aa13.51□□□□□ -0.25
AP4E1-205ENST00000561393 OR1L4Q8NGR5 311 aa13.51□□□□□ -0.25
AP4E1-205ENST00000561393 TCEAL7Q9BRU2 100 aa13.51□□□□□ -0.25
AP4E1-205ENST00000561393 ZNF705GA8MUZ8 300 aaPredicted RBP13.5□□□□□ -0.25
AP4E1-205ENST00000561393 MDKP21741 143 aaPredicted RBP13.5□□□□□ -0.25
AP4E1-205ENST00000561393 SAMD10Q9BYL1 202 aa13.5□□□□□ -0.25
AP4E1-205ENST00000561393 TMEM167BQ9NRX6 74 aa13.5□□□□□ -0.25
AP4E1-205ENST00000561393 EYSQ5T1H1 3165 aa13.5□□□□□ -0.25
AP4E1-205ENST00000561393 RRHO14718 337 aa13.5□□□□□ -0.25
AP4E1-205ENST00000561393 RBFOX2O43251 390 aaKnown RBP eCLIP13.5□□□□□ -0.25
AP4E1-205ENST00000561393 NPIPB3Q92617 1050 aa13.5□□□□□ -0.25
AP4E1-205ENST00000561393 IGLV3-9A0A075B6K5 115 aa13.5□□□□□ -0.25
AP4E1-205ENST00000561393 SLC25A5P05141 298 aaKnown RBP13.5□□□□□ -0.25
AP4E1-205ENST00000561393 BRS3P32247 399 aa13.5□□□□□ -0.25
AP4E1-205ENST00000561393 GNG4P50150 75 aa13.5□□□□□ -0.25
AP4E1-205ENST00000561393 IL15RAQ13261 267 aa13.5□□□□□ -0.25
AP4E1-205ENST00000561393 BTF3L4Q96K17 158 aa13.5□□□□□ -0.25
AP4E1-205ENST00000561393 CARHSP1Q9Y2V2 147 aaKnown RBP13.5□□□□□ -0.25
AP4E1-205ENST00000561393 ARL14EPLP0DKL9 152 aa13.49□□□□□ -0.25
AP4E1-205ENST00000561393 GATA2P23769 480 aaPredicted RBP13.49□□□□□ -0.25
AP4E1-205ENST00000561393 UNQ6494/PRO21346Q6UXR6 183 aa13.49□□□□□ -0.25
AP4E1-205ENST00000561393 OR5B3Q8NH48 314 aa13.49□□□□□ -0.25
AP4E1-205ENST00000561393 FBXL15Q9H469 300 aa13.49□□□□□ -0.25
AP4E1-205ENST00000561393 C1QTNF9BB2RNN3 333 aa13.49□□□□□ -0.25
AP4E1-205ENST00000561393 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.49□□□□□ -0.25
AP4E1-205ENST00000561393 C1QTNF9P0C862 333 aa13.49□□□□□ -0.25
AP4E1-205ENST00000561393 MYOD1P15172 320 aa13.49□□□□□ -0.25
AP4E1-205ENST00000561393 TMEM11P17152 192 aa13.49□□□□□ -0.25
AP4E1-205ENST00000561393 FABP9Q0Z7S8 132 aa13.49□□□□□ -0.25
AP4E1-205ENST00000561393 NCMAPQ5T1S8 102 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms