RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 GAR1Q9NY12 217 aaKnown RBP12.23□□□□□ -0.45
SNX1-213ENST00000561026 CEPT1Q9Y6K0 416 aa12.23□□□□□ -0.45
SNX1-213ENST00000561026 S4R3C0 116 aa12.23□□□□□ -0.45
SNX1-213ENST00000561026 STARD9Q9P2P6 4700 aa12.23□□□□□ -0.45
SNX1-213ENST00000561026 LCE6AA0A183 80 aa12.22□□□□□ -0.45
SNX1-213ENST00000561026 SULT1C2O00338 296 aa12.22□□□□□ -0.45
SNX1-213ENST00000561026 TMEM127O75204 238 aa12.22□□□□□ -0.45
SNX1-213ENST00000561026 FCER2P06734 321 aa12.22□□□□□ -0.45
SNX1-213ENST00000561026 DEFA4P12838 97 aa12.22□□□□□ -0.45
SNX1-213ENST00000561026 CBLN1P23435 193 aa12.22□□□□□ -0.45
SNX1-213ENST00000561026 TAS2R31P59538 309 aa12.22□□□□□ -0.45
SNX1-213ENST00000561026 FXYD4P59646 89 aa12.22□□□□□ -0.45
SNX1-213ENST00000561026 OR2B8PP59922 312 aa12.22□□□□□ -0.45
SNX1-213ENST00000561026 NEDD8Q15843 81 aa12.22□□□□□ -0.45
SNX1-213ENST00000561026 GUCA2BQ16661 112 aa12.22□□□□□ -0.45
SNX1-213ENST00000561026 OR5AP2Q8NGF4 316 aa12.22□□□□□ -0.45
SNX1-213ENST00000561026 EEF1AKMT3Q96AZ1 226 aa12.22□□□□□ -0.45
SNX1-213ENST00000561026 HIPK2Q9H2X6 1198 aa12.22□□□□□ -0.45
SNX1-213ENST00000561026 SACSQ9NZJ4 4579 aa12.21□□□□□ -0.45
SNX1-213ENST00000561026 IGLV11-55A0A075B6I3 123 aa12.21□□□□□ -0.45
SNX1-213ENST00000561026 HPRT1P00492 218 aa12.21□□□□□ -0.45
SNX1-213ENST00000561026 REG1AP05451 166 aa12.21□□□□□ -0.45
SNX1-213ENST00000561026 NQO2P16083 231 aa12.21□□□□□ -0.45
SNX1-213ENST00000561026 CBX5P45973 191 aa12.21□□□□□ -0.45
SNX1-213ENST00000561026 CATR1Q13166 79 aa12.21□□□□□ -0.45
SNX1-213ENST00000561026 POU2AF1Q16633 256 aa12.21□□□□□ -0.45
SNX1-213ENST00000561026 FAM106AQ4KMX7 169 aa12.21□□□□□ -0.45
SNX1-213ENST00000561026 ZNF818PQ6ZRF7 136 aa12.21□□□□□ -0.45
SNX1-213ENST00000561026 DEFB125Q8N687 156 aa12.21□□□□□ -0.45
SNX1-213ENST00000561026 WDR89Q96FK6 387 aaPredicted RBP12.21□□□□□ -0.45
SNX1-213ENST00000561026 TRBV7-1A0A0A6YYK4 115 aa12.2□□□□□ -0.46
SNX1-213ENST00000561026 TRAV3A0A0B4J244 114 aa12.2□□□□□ -0.46
SNX1-213ENST00000561026 ZNF320A2RRD8 509 aa12.2□□□□□ -0.46
SNX1-213ENST00000561026 RBMY1BA6NDE4 496 aaKnown RBP12.2□□□□□ -0.46
SNX1-213ENST00000561026 RBMY1EA6NEQ0 496 aaKnown RBP12.2□□□□□ -0.46
SNX1-213ENST00000561026 OR11H12B2RN74 326 aa12.2□□□□□ -0.46
SNX1-213ENST00000561026 UPK2O00526 184 aa12.2□□□□□ -0.46
SNX1-213ENST00000561026 CLEC3BP05452 202 aa12.2□□□□□ -0.46
SNX1-213ENST00000561026 RBMY1DP0C7P1 496 aaKnown RBP12.2□□□□□ -0.46
SNX1-213ENST00000561026 CD300LFQ8TDQ1 290 aa12.2□□□□□ -0.46
SNX1-213ENST00000561026 CACNG8Q8WXS5 425 aa12.2□□□□□ -0.46
SNX1-213ENST00000561026 CXorf58Q96LI9 332 aa12.2□□□□□ -0.46
SNX1-213ENST00000561026 PLEKHA2Q9HB19 425 aa12.2□□□□□ -0.46
SNX1-213ENST00000561026 RETNQ9HD89 108 aa12.2□□□□□ -0.46
SNX1-213ENST00000561026 IGLC7A0M8Q6 106 aa12.19□□□□□ -0.46
SNX1-213ENST00000561026 TMEM213A2RRL7 107 aa12.19□□□□□ -0.46
SNX1-213ENST00000561026 MFSD2BA6NFX1 497 aa12.19□□□□□ -0.46
SNX1-213ENST00000561026 A8MWP6 167 aa12.19□□□□□ -0.46
SNX1-213ENST00000561026 XRCC3O43542 346 aa12.19□□□□□ -0.46
SNX1-213ENST00000561026 FGF2P09038 288 aa12.19□□□□□ -0.46
SNX1-213ENST00000561026 GNRHRP30968 328 aa12.19□□□□□ -0.46
SNX1-213ENST00000561026 KCTD21Q4G0X4 260 aa12.19□□□□□ -0.46
SNX1-213ENST00000561026 TMEM17Q86X19 198 aa12.19□□□□□ -0.46
SNX1-213ENST00000561026 CROCCP3Q8IVE0 287 aa12.19□□□□□ -0.46
SNX1-213ENST00000561026 OR51H1Q8NH63 302 aa12.19□□□□□ -0.46
SNX1-213ENST00000561026 S100A16Q96FQ6 103 aaKnown RBP12.19□□□□□ -0.46
SNX1-213ENST00000561026 SRSF8Q9BRL6 282 aaKnown RBP12.19□□□□□ -0.46
SNX1-213ENST00000561026 COMMD5Q9GZQ3 224 aa12.19□□□□□ -0.46
SNX1-213ENST00000561026 WFDC10AQ9H1F0 79 aa12.19□□□□□ -0.46
SNX1-213ENST00000561026 MEIS3P1A6NDR6 274 aa12.18□□□□□ -0.46
SNX1-213ENST00000561026 AADACL3Q5VUY0 350 aa12.18□□□□□ -0.46
SNX1-213ENST00000561026 ZNF57Q68EA5 555 aaPredicted RBP12.18□□□□□ -0.46
SNX1-213ENST00000561026 DHRS11Q6UWP2 260 aa12.18□□□□□ -0.46
SNX1-213ENST00000561026 TMEM61Q8N0U2 210 aa12.18□□□□□ -0.46
SNX1-213ENST00000561026 UXS1Q8NBZ7 420 aa12.18□□□□□ -0.46
SNX1-213ENST00000561026 DMBX1Q8NFW5 382 aa12.18□□□□□ -0.46
SNX1-213ENST00000561026 BORCS5Q969J3 196 aa12.18□□□□□ -0.46
SNX1-213ENST00000561026 SRD5A3Q9H8P0 318 aa12.18□□□□□ -0.46
SNX1-213ENST00000561026 TMEM140Q9NV12 185 aa12.18□□□□□ -0.46
SNX1-213ENST00000561026 MLXQ9UH92 298 aa12.18□□□□□ -0.46
SNX1-213ENST00000561026 SELENOKQ9Y6D0 94 aa12.18□□□□□ -0.46
SNX1-213ENST00000561026 S1PR2O95136 353 aa12.18□□□□□ -0.46
SNX1-213ENST00000561026 RFX2P48378 723 aa12.18□□□□□ -0.46
SNX1-213ENST00000561026 HERV-K104P61576 105 aa12.18□□□□□ -0.46
SNX1-213ENST00000561026 UNQ9165/PRO28630Q6UXU0 137 aa12.18□□□□□ -0.46
SNX1-213ENST00000561026 SLC16A13Q7RTY0 426 aa12.18□□□□□ -0.46
SNX1-213ENST00000561026 ZNF502Q8TBZ5 544 aa12.18□□□□□ -0.46
SNX1-213ENST00000561026 FAM110AQ9BQ89 295 aa12.18□□□□□ -0.46
SNX1-213ENST00000561026 QTRT1Q9BXR0 403 aaKnown RBP12.18□□□□□ -0.46
SNX1-213ENST00000561026 IFT46Q9NQC8 304 aa12.18□□□□□ -0.46
SNX1-213ENST00000561026 EHFQ9NZC4 300 aa12.18□□□□□ -0.46
SNX1-213ENST00000561026 COMMD9Q9P000 198 aa12.18□□□□□ -0.46
SNX1-213ENST00000561026 THYN1Q9P016 225 aa12.18□□□□□ -0.46
SNX1-213ENST00000561026 LYSTQ99698 3801 aa12.17□□□□□ -0.46
SNX1-213ENST00000561026 PGLYRP1O75594 196 aaPredicted RBP12.17□□□□□ -0.46
SNX1-213ENST00000561026 PTBP1P26599 531 aaKnown RBP eCLIP12.17□□□□□ -0.46
SNX1-213ENST00000561026 TGFBR1P36897 503 aa12.17□□□□□ -0.46
SNX1-213ENST00000561026 RPS19P39019 145 aaKnown RBP12.17□□□□□ -0.46
SNX1-213ENST00000561026 TM4SF20Q53R12 229 aa12.17□□□□□ -0.46
SNX1-213ENST00000561026 UBE2NLQ5JXB2 153 aa12.17□□□□□ -0.46
SNX1-213ENST00000561026 OR10W1Q8NGF6 305 aa12.17□□□□□ -0.46
SNX1-213ENST00000561026 ANAPC10Q9UM13 185 aa12.17□□□□□ -0.46
SNX1-213ENST00000561026 C8orf88P0DMB2 117 aa12.16□□□□□ -0.46
SNX1-213ENST00000561026 RPA2P15927 270 aa12.16□□□□□ -0.46
SNX1-213ENST00000561026 GPR183P32249 361 aa12.16□□□□□ -0.46
SNX1-213ENST00000561026 TMEM69Q5SWH9 247 aa12.16□□□□□ -0.46
SNX1-213ENST00000561026 THOC7Q6I9Y2 204 aaKnown RBP12.16□□□□□ -0.46
SNX1-213ENST00000561026 IL17DQ8TAD2 202 aa12.16□□□□□ -0.46
SNX1-213ENST00000561026 MARC2Q969Z3 335 aa12.16□□□□□ -0.46
SNX1-213ENST00000561026 MOB3AQ96BX8 217 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms