RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 DAPK2Q9UIK4 370 aa6.94□□□□□ -1.3
HERC1-210ENST00000560897 SRRM2Q9UQ35 2752 aaKnown RBP6.93□□□□□ -1.3
HERC1-210ENST00000560897 TMEM127O75204 238 aa6.93□□□□□ -1.3
HERC1-210ENST00000560897 SC5DO75845 299 aa6.93□□□□□ -1.3
HERC1-210ENST00000560897 S1PR2O95136 353 aa6.93□□□□□ -1.3
HERC1-210ENST00000560897 SSBP2P81877 361 aaPredicted RBP6.93□□□□□ -1.3
HERC1-210ENST00000560897 PJVKQ0ZLH3 352 aa6.93□□□□□ -1.3
HERC1-210ENST00000560897 P2RY14Q15391 338 aa6.93□□□□□ -1.3
HERC1-210ENST00000560897 TNXAQ16473 311 aa6.93□□□□□ -1.3
HERC1-210ENST00000560897 LCE2AQ5TA79 106 aaPredicted RBP6.93□□□□□ -1.3
HERC1-210ENST00000560897 HES5Q5TA89 166 aa6.93□□□□□ -1.3
HERC1-210ENST00000560897 RAB12Q6IQ22 244 aa6.93□□□□□ -1.3
HERC1-210ENST00000560897 CLEC19AQ6UXS0 136 aa6.93□□□□□ -1.3
HERC1-210ENST00000560897 LRRTM1Q86UE6 522 aa6.93□□□□□ -1.3
HERC1-210ENST00000560897 APRG1Q8IVJ8 170 aa6.93□□□□□ -1.3
HERC1-210ENST00000560897 DRAXINQ8NBI3 349 aaPredicted RBP6.93□□□□□ -1.3
HERC1-210ENST00000560897 DGCR14Q96DF8 476 aaKnown RBP6.93□□□□□ -1.3
HERC1-210ENST00000560897 ABHD14BQ96IU4 210 aa6.93□□□□□ -1.3
HERC1-210ENST00000560897 NEDD4LQ96PU5 975 aa6.93□□□□□ -1.3
HERC1-210ENST00000560897 SELENOIQ9C0D9 397 aa6.93□□□□□ -1.3
HERC1-210ENST00000560897 UFC1Q9Y3C8 167 aa6.93□□□□□ -1.3
HERC1-210ENST00000560897 PEX16Q9Y5Y5 336 aa6.93□□□□□ -1.3
HERC1-210ENST00000560897 TRBV9A0A0B4J1U6 114 aa6.92□□□□□ -1.3
HERC1-210ENST00000560897 IGHV4-28A0A0C4DH34 117 aa6.92□□□□□ -1.3
HERC1-210ENST00000560897 SMIM30A4D0T7 59 aa6.92□□□□□ -1.3
HERC1-210ENST00000560897 DPPA5A6NC42 116 aa6.92□□□□□ -1.3
HERC1-210ENST00000560897 SLC17A2O00624 439 aa6.92□□□□□ -1.3
HERC1-210ENST00000560897 ACTL6BO94805 426 aa6.92□□□□□ -1.3
HERC1-210ENST00000560897 IGHV3-23P01764 117 aa6.92□□□□□ -1.3
HERC1-210ENST00000560897 CMC4P56277 68 aaPredicted RBP6.92□□□□□ -1.3
HERC1-210ENST00000560897 NCS1P62166 190 aa6.92□□□□□ -1.3
HERC1-210ENST00000560897 C2orf76Q3KRA6 126 aa6.92□□□□□ -1.3
HERC1-210ENST00000560897 Q5VSD8 79 aa6.92□□□□□ -1.3
HERC1-210ENST00000560897 ZNF529Q6P280 563 aa6.92□□□□□ -1.3
HERC1-210ENST00000560897 ASCL4Q6XD76 172 aa6.92□□□□□ -1.3
HERC1-210ENST00000560897 SLC25A42Q86VD7 318 aa6.92□□□□□ -1.3
HERC1-210ENST00000560897 Q8NAQ8 132 aa6.92□□□□□ -1.3
HERC1-210ENST00000560897 SYT8Q8NBV8 401 aa6.92□□□□□ -1.3
HERC1-210ENST00000560897 SRSF12Q8WXF0 261 aaKnown RBP6.92□□□□□ -1.3
HERC1-210ENST00000560897 ACOT12Q8WYK0 555 aa6.92□□□□□ -1.3
HERC1-210ENST00000560897 FAM3DQ96BQ1 224 aa6.92□□□□□ -1.3
HERC1-210ENST00000560897 HARBI1Q96MB7 349 aa6.92□□□□□ -1.3
HERC1-210ENST00000560897 CHRDL1Q9BU40 450 aa6.92□□□□□ -1.3
HERC1-210ENST00000560897 DCSTAMPQ9H295 470 aa6.92□□□□□ -1.3
HERC1-210ENST00000560897 RNF167Q9H6Y7 350 aa6.92□□□□□ -1.3
HERC1-210ENST00000560897 RAB22AQ9UL26 194 aa6.92□□□□□ -1.3
HERC1-210ENST00000560897 IFITM5A6NNB3 132 aa6.91□□□□□ -1.3
HERC1-210ENST00000560897 FAM25AB3EWG3 89 aa6.91□□□□□ -1.3
HERC1-210ENST00000560897 FAM25CB3EWG5 89 aa6.91□□□□□ -1.3
HERC1-210ENST00000560897 FAM25GB3EWG6 89 aa6.91□□□□□ -1.3
HERC1-210ENST00000560897 RGS5O15539 181 aa6.91□□□□□ -1.3
HERC1-210ENST00000560897 SCGNO76038 276 aa6.91□□□□□ -1.3
HERC1-210ENST00000560897 GABARAPO95166 117 aa6.91□□□□□ -1.3
HERC1-210ENST00000560897 CD74P04233 296 aa6.91□□□□□ -1.3
HERC1-210ENST00000560897 C8orf88P0DMB2 117 aa6.91□□□□□ -1.3
HERC1-210ENST00000560897 MIFP14174 115 aa6.91□□□□□ -1.3
HERC1-210ENST00000560897 NPY1RP25929 384 aa6.91□□□□□ -1.3
HERC1-210ENST00000560897 TALDO1P37837 337 aa6.91□□□□□ -1.3
HERC1-210ENST00000560897 RPS19P39019 145 aaKnown RBP6.91□□□□□ -1.3
HERC1-210ENST00000560897 CLDN12P56749 244 aa6.91□□□□□ -1.3
HERC1-210ENST00000560897 C1orf100Q5SVJ3 147 aa6.91□□□□□ -1.3
HERC1-210ENST00000560897 SFXN4Q6P4A7 337 aa6.91□□□□□ -1.3
HERC1-210ENST00000560897 LINC00528Q8N1L1 170 aa6.91□□□□□ -1.3
HERC1-210ENST00000560897 GAPTQ8N292 157 aa6.91□□□□□ -1.3
HERC1-210ENST00000560897 EDARADDQ8WWZ3 215 aa6.91□□□□□ -1.3
HERC1-210ENST00000560897 EEF1AKMT3Q96AZ1 226 aa6.91□□□□□ -1.3
HERC1-210ENST00000560897 S100A16Q96FQ6 103 aaKnown RBP6.91□□□□□ -1.3
HERC1-210ENST00000560897 TSC22D3Q99576 134 aa6.91□□□□□ -1.3
HERC1-210ENST00000560897 SPIN2AQ99865 258 aa6.91□□□□□ -1.3
HERC1-210ENST00000560897 SPIN2BQ9BPZ2 258 aa6.91□□□□□ -1.3
HERC1-210ENST00000560897 NICN1Q9BSH3 213 aa6.91□□□□□ -1.3
HERC1-210ENST00000560897 TMEM59Q9BXS4 323 aa6.91□□□□□ -1.3
HERC1-210ENST00000560897 ATG5Q9H1Y0 275 aa6.91□□□□□ -1.3
HERC1-210ENST00000560897 BANF2Q9H503 90 aa6.91□□□□□ -1.3
HERC1-210ENST00000560897 DIABLOQ9NR28 239 aa6.91□□□□□ -1.3
HERC1-210ENST00000560897 SLC35D1Q9NTN3 355 aa6.91□□□□□ -1.3
HERC1-210ENST00000560897 PLEKHJ1Q9NW61 149 aa6.91□□□□□ -1.3
HERC1-210ENST00000560897 ZNF221Q9UK13 617 aa6.91□□□□□ -1.3
HERC1-210ENST00000560897 UBE2QL1A1L167 161 aa6.9□□□□□ -1.3
HERC1-210ENST00000560897 CREBL2O60519 120 aaPredicted RBP6.9□□□□□ -1.3
HERC1-210ENST00000560897 CLEC2LP0C7M8 214 aa6.9□□□□□ -1.3
HERC1-210ENST00000560897 MGMTP16455 207 aa6.9□□□□□ -1.3
HERC1-210ENST00000560897 ZNF182P17025 639 aaPredicted RBP6.9□□□□□ -1.3
HERC1-210ENST00000560897 S100A5P33763 92 aa6.9□□□□□ -1.3
HERC1-210ENST00000560897 ELLP55199 621 aaPredicted RBP6.9□□□□□ -1.3
HERC1-210ENST00000560897 OR10A3P58181 314 aa6.9□□□□□ -1.3
HERC1-210ENST00000560897 ARL6IP1Q15041 203 aa6.9□□□□□ -1.3
HERC1-210ENST00000560897 VMA21Q3ZAQ7 101 aa6.9□□□□□ -1.3
HERC1-210ENST00000560897 RNF212Q495C1 297 aa6.9□□□□□ -1.3
HERC1-210ENST00000560897 C6orf223Q8N319 242 aa6.9□□□□□ -1.3
HERC1-210ENST00000560897 OR56B1Q8NGI3 324 aa6.9□□□□□ -1.3
HERC1-210ENST00000560897 MRPL30Q8TCC3 161 aaKnown RBP6.9□□□□□ -1.3
HERC1-210ENST00000560897 SLC25A46Q96AG3 418 aa6.9□□□□□ -1.3
HERC1-210ENST00000560897 NAA50Q9GZZ1 169 aaKnown RBP6.9□□□□□ -1.3
HERC1-210ENST00000560897 COMMD3Q9UBI1 195 aa6.9□□□□□ -1.3
HERC1-210ENST00000560897 DMRT1Q9Y5R6 373 aa6.9□□□□□ -1.3
HERC1-210ENST00000560897 A0A1W2PP11 408 aa6.89□□□□□ -1.31
HERC1-210ENST00000560897 FAM90A7PA6NKC0 464 aa6.89□□□□□ -1.31
HERC1-210ENST00000560897 ZNF701M0R085 212 aaPredicted RBP6.89□□□□□ -1.31
HERC1-210ENST00000560897 IGLV2-23P01705 113 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms