RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 SERF2P84101 59 aa10.42□□□□□ -0.74
SNX1-211ENST00000560829 PRB3Q04118 309 aaPredicted RBP10.42□□□□□ -0.74
SNX1-211ENST00000560829 TPTE2P1Q5T6R2 138 aa10.42□□□□□ -0.74
SNX1-211ENST00000560829 RPEQ96AT9 228 aa10.42□□□□□ -0.74
SNX1-211ENST00000560829 LINC00052Q96N35 136 aa10.42□□□□□ -0.74
SNX1-211ENST00000560829 ENY2Q9NPA8 101 aa10.42□□□□□ -0.74
SNX1-211ENST00000560829 DPM3Q9P2X0 92 aa10.42□□□□□ -0.74
SNX1-211ENST00000560829 COL12A1Q99715 3063 aa10.42□□□□□ -0.74
SNX1-211ENST00000560829 ZNF462Q96JM2 2506 aa10.41□□□□□ -0.74
SNX1-211ENST00000560829 IGHV2-70DA0A0C4DH43 119 aa10.41□□□□□ -0.74
SNX1-211ENST00000560829 UBE2L5PA0A1B0GUS4 154 aa10.41□□□□□ -0.74
SNX1-211ENST00000560829 A0A1W2PPI3 338 aa10.41□□□□□ -0.74
SNX1-211ENST00000560829 NDUFS8O00217 210 aa10.41□□□□□ -0.74
SNX1-211ENST00000560829 RRHO14718 337 aa10.41□□□□□ -0.74
SNX1-211ENST00000560829 MYOD1P15172 320 aa10.41□□□□□ -0.74
SNX1-211ENST00000560829 HTR1DP28221 377 aa10.41□□□□□ -0.74
SNX1-211ENST00000560829 RAB11AP62491 216 aa10.41□□□□□ -0.74
SNX1-211ENST00000560829 BSXQ3C1V8 233 aa10.41□□□□□ -0.74
SNX1-211ENST00000560829 VMA21Q3ZAQ7 101 aa10.41□□□□□ -0.74
SNX1-211ENST00000560829 LDLRAD2Q5SZI1 272 aa10.41□□□□□ -0.74
SNX1-211ENST00000560829 AKR1C8PQ5T2L2 129 aa10.41□□□□□ -0.74
SNX1-211ENST00000560829 ETV3LQ6ZN32 361 aa10.41□□□□□ -0.74
SNX1-211ENST00000560829 SLC24A4Q8NFF2 622 aa10.41□□□□□ -0.74
SNX1-211ENST00000560829 RNF5Q99942 180 aa10.41□□□□□ -0.74
SNX1-211ENST00000560829 RSG1Q9BU20 258 aa10.41□□□□□ -0.74
SNX1-211ENST00000560829 SIRPDQ9H106 197 aa10.41□□□□□ -0.74
SNX1-211ENST00000560829 PLEKHA3Q9HB20 300 aa10.41□□□□□ -0.74
SNX1-211ENST00000560829 NDUFA4L2Q9NRX3 87 aa10.41□□□□□ -0.74
SNX1-211ENST00000560829 POLR3KQ9Y2Y1 108 aaPredicted RBP10.41□□□□□ -0.74
SNX1-211ENST00000560829 NPY1RP25929 384 aa10.4□□□□□ -0.74
SNX1-211ENST00000560829 CEACAM3P40198 252 aa10.4□□□□□ -0.74
SNX1-211ENST00000560829 YLPM1P49750 1951 aaKnown RBP10.4□□□□□ -0.74
SNX1-211ENST00000560829 ZNF616Q08AN1 781 aa10.4□□□□□ -0.74
SNX1-211ENST00000560829 SP5Q6BEB4 398 aaPredicted RBP10.4□□□□□ -0.74
SNX1-211ENST00000560829 TEX45Q8NA69 505 aa10.4□□□□□ -0.74
SNX1-211ENST00000560829 FAM213BQ8TBF2 198 aa10.4□□□□□ -0.74
SNX1-211ENST00000560829 USP9XQ93008 2570 aaPredicted RBP10.4□□□□□ -0.74
SNX1-211ENST00000560829 COMMD5Q9GZQ3 224 aa10.4□□□□□ -0.74
SNX1-211ENST00000560829 FBXO7Q9Y3I1 522 aa10.4□□□□□ -0.74
SNX1-211ENST00000560829 UBR5O95071 2799 aaPredicted RBP10.4□□□□□ -0.74
SNX1-211ENST00000560829 FLNCQ14315 2725 aa10.4□□□□□ -0.74
SNX1-211ENST00000560829 IGHV3-72A0A0B4J1Y9 119 aa10.4□□□□□ -0.75
SNX1-211ENST00000560829 FOXH1O75593 365 aa10.4□□□□□ -0.75
SNX1-211ENST00000560829 TSPAN15O95858 294 aa10.4□□□□□ -0.75
SNX1-211ENST00000560829 CRYGBP07316 175 aa10.4□□□□□ -0.75
SNX1-211ENST00000560829 PAX1P15863 534 aa10.4□□□□□ -0.75
SNX1-211ENST00000560829 DLK1P80370 383 aa10.4□□□□□ -0.75
SNX1-211ENST00000560829 HABP2Q14520 560 aaPredicted RBP10.4□□□□□ -0.75
SNX1-211ENST00000560829 MRGPRG-AS1Q2M3A8 158 aa10.4□□□□□ -0.75
SNX1-211ENST00000560829 VMO1Q7Z5L0 202 aa10.4□□□□□ -0.75
SNX1-211ENST00000560829 MOB3BQ86TA1 216 aa10.4□□□□□ -0.75
SNX1-211ENST00000560829 OR1L8Q8NGR8 309 aa10.4□□□□□ -0.75
SNX1-211ENST00000560829 C10orf105Q8TEF2 133 aa10.4□□□□□ -0.75
SNX1-211ENST00000560829 RITA1Q96K30 269 aa10.4□□□□□ -0.75
SNX1-211ENST00000560829 WDR83OSQ9Y284 106 aa10.4□□□□□ -0.75
SNX1-211ENST00000560829 EPG5Q9HCE0 2579 aa10.39□□□□□ -0.75
SNX1-211ENST00000560829 VWC2LB2RUY7 222 aa10.39□□□□□ -0.75
SNX1-211ENST00000560829 CA2P00918 260 aa10.39□□□□□ -0.75
SNX1-211ENST00000560829 COX6B1P14854 86 aa10.39□□□□□ -0.75
SNX1-211ENST00000560829 CD1BP29016 333 aa10.39□□□□□ -0.75
SNX1-211ENST00000560829 SNCAP37840 140 aa10.39□□□□□ -0.75
SNX1-211ENST00000560829 LCN2P80188 198 aa10.39□□□□□ -0.75
SNX1-211ENST00000560829 LFNGQ8NES3 379 aa10.39□□□□□ -0.75
SNX1-211ENST00000560829 BPIFCQ8NFQ6 507 aa10.39□□□□□ -0.75
SNX1-211ENST00000560829 FAM168AQ92567 244 aa10.39□□□□□ -0.75
SNX1-211ENST00000560829 PIMREGQ9BSJ6 248 aa10.39□□□□□ -0.75
SNX1-211ENST00000560829 ZNF430Q9H8G1 570 aaPredicted RBP10.39□□□□□ -0.75
SNX1-211ENST00000560829 A0A1W2PN81 502 aa10.38□□□□□ -0.75
SNX1-211ENST00000560829 BTBD17A6NE02 478 aa10.38□□□□□ -0.75
SNX1-211ENST00000560829 OOSP1A8MZH6 123 aa10.38□□□□□ -0.75
SNX1-211ENST00000560829 FNDC10F2Z333 226 aa10.38□□□□□ -0.75
SNX1-211ENST00000560829 SLC25A17O43808 307 aa10.38□□□□□ -0.75
SNX1-211ENST00000560829 MPDU1O75352 247 aa10.38□□□□□ -0.75
SNX1-211ENST00000560829 CD5P06127 495 aa10.38□□□□□ -0.75
SNX1-211ENST00000560829 HOXB4P17483 251 aaPredicted RBP10.38□□□□□ -0.75
SNX1-211ENST00000560829 CHRNA7P36544 502 aa10.38□□□□□ -0.75
SNX1-211ENST00000560829 KLRD1Q13241 179 aa10.38□□□□□ -0.75
SNX1-211ENST00000560829 TUSC1Q2TAM9 212 aa10.38□□□□□ -0.75
SNX1-211ENST00000560829 C2orf83Q53S99 150 aa10.38□□□□□ -0.75
SNX1-211ENST00000560829 MINOS1Q5TGZ0 78 aa10.38□□□□□ -0.75
SNX1-211ENST00000560829 CCDC28AQ8IWP9 274 aa10.38□□□□□ -0.75
SNX1-211ENST00000560829 CFHR4Q92496 578 aa10.38□□□□□ -0.75
SNX1-211ENST00000560829 HINT2Q9BX68 163 aa10.38□□□□□ -0.75
SNX1-211ENST00000560829 NPCDR1Q9BY65 106 aa10.38□□□□□ -0.75
SNX1-211ENST00000560829 MINOS1-NBL1R4GNA1 71 aa10.38□□□□□ -0.75
SNX1-211ENST00000560829 TMEM218A2RU14 115 aa10.38□□□□□ -0.75
SNX1-211ENST00000560829 CGB1A6NKQ9 187 aa10.38□□□□□ -0.75
SNX1-211ENST00000560829 RNASEK-C17orf49H0YIS7 233 aa10.38□□□□□ -0.75
SNX1-211ENST00000560829 IFNA4P05014 189 aa10.38□□□□□ -0.75
SNX1-211ENST00000560829 H2AFB1P0C5Y9 115 aa10.38□□□□□ -0.75
SNX1-211ENST00000560829 FGF7P21781 194 aa10.38□□□□□ -0.75
SNX1-211ENST00000560829 SRSF3P84103 164 aaKnown RBP10.38□□□□□ -0.75
SNX1-211ENST00000560829 PSG5Q15238 335 aa10.38□□□□□ -0.75
SNX1-211ENST00000560829 SPSB3Q6PJ21 355 aa10.38□□□□□ -0.75
SNX1-211ENST00000560829 RPRMQ9NS64 109 aa10.38□□□□□ -0.75
SNX1-211ENST00000560829 TRAV1-1A0A0B4J248 108 aa10.37□□□□□ -0.75
SNX1-211ENST00000560829 A0A1B0GW64 132 aa10.37□□□□□ -0.75
SNX1-211ENST00000560829 TIMM23O14925 209 aa10.37□□□□□ -0.75
SNX1-211ENST00000560829 SOX15O60248 233 aa10.37□□□□□ -0.75
SNX1-211ENST00000560829 VENTXO95231 258 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms