RNA–Protein interactions for RNA: ENST00000560428.1

TNFAIP2-206, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 773 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-206ENST00000560428 FANCD2OSQ96PS1 177 aa13.69□□□□□ -0.22
TNFAIP2-206ENST00000560428 SRSF8Q9BRL6 282 aaKnown RBP13.69□□□□□ -0.22
TNFAIP2-206ENST00000560428 SCPEP1Q9HB40 452 aa13.69□□□□□ -0.22
TNFAIP2-206ENST00000560428 COMMD3Q9UBI1 195 aa13.69□□□□□ -0.22
TNFAIP2-206ENST00000560428 DMRT1Q9Y5R6 373 aa13.69□□□□□ -0.22
TNFAIP2-206ENST00000560428 HUWE1Q7Z6Z7 4374 aaKnown RBP13.69□□□□□ -0.22
TNFAIP2-206ENST00000560428 S1PR2O95136 353 aa13.68□□□□□ -0.22
TNFAIP2-206ENST00000560428 F2RP25116 425 aa13.68□□□□□ -0.22
TNFAIP2-206ENST00000560428 MECP2P51608 486 aaKnown RBP13.68□□□□□ -0.22
TNFAIP2-206ENST00000560428 C19orf35Q6ZS72 473 aa13.68□□□□□ -0.22
TNFAIP2-206ENST00000560428 CMTM1Q8IZ96 169 aa13.68□□□□□ -0.22
TNFAIP2-206ENST00000560428 DMBX1Q8NFW5 382 aa13.68□□□□□ -0.22
TNFAIP2-206ENST00000560428 OR6F1Q8NGZ6 308 aa13.68□□□□□ -0.22
TNFAIP2-206ENST00000560428 COMMD5Q9GZQ3 224 aa13.68□□□□□ -0.22
TNFAIP2-206ENST00000560428 TMEM140Q9NV12 185 aa13.68□□□□□ -0.22
TNFAIP2-206ENST00000560428 IGLV11-55A0A075B6I3 123 aa13.67□□□□□ -0.22
TNFAIP2-206ENST00000560428 GGCTO75223 188 aaKnown RBP13.67□□□□□ -0.22
TNFAIP2-206ENST00000560428 PGLYRP1O75594 196 aaPredicted RBP13.67□□□□□ -0.22
TNFAIP2-206ENST00000560428 RLN1P04808 185 aa13.67□□□□□ -0.22
TNFAIP2-206ENST00000560428 IGHV4-30-4P0DP06 118 aa13.67□□□□□ -0.22
TNFAIP2-206ENST00000560428 MYOD1P15172 320 aa13.67□□□□□ -0.22
TNFAIP2-206ENST00000560428 HRH1P35367 487 aa13.67□□□□□ -0.22
TNFAIP2-206ENST00000560428 RORCP51449 518 aa13.67□□□□□ -0.22
TNFAIP2-206ENST00000560428 THOC7Q6I9Y2 204 aaKnown RBP13.67□□□□□ -0.22
TNFAIP2-206ENST00000560428 LYSMD2Q8IV50 215 aa13.67□□□□□ -0.22
TNFAIP2-206ENST00000560428 CADM3Q8N126 398 aa13.67□□□□□ -0.22
TNFAIP2-206ENST00000560428 EEF1AKMT3Q96AZ1 226 aa13.67□□□□□ -0.22
TNFAIP2-206ENST00000560428 THAP7Q9BT49 309 aaPredicted RBP13.67□□□□□ -0.22
TNFAIP2-206ENST00000560428 FXYD6Q9H0Q3 95 aa13.67□□□□□ -0.22
TNFAIP2-206ENST00000560428 KMT2CQ8NEZ4 4911 aaKnown RBP13.67□□□□□ -0.22
TNFAIP2-206ENST00000560428 TRAV3A0A0B4J244 114 aa13.66□□□□□ -0.22
TNFAIP2-206ENST00000560428 IGLC7A0M8Q6 106 aa13.66□□□□□ -0.22
TNFAIP2-206ENST00000560428 MARCH11A6NNE9 402 aa13.66□□□□□ -0.22
TNFAIP2-206ENST00000560428 PPP5D1E7EU14 171 aa13.66□□□□□ -0.22
TNFAIP2-206ENST00000560428 LGALS9O00182 355 aa13.66□□□□□ -0.22
TNFAIP2-206ENST00000560428 GPR31O00270 319 aa13.66□□□□□ -0.22
TNFAIP2-206ENST00000560428 NDUFB8O95169 186 aa13.66□□□□□ -0.22
TNFAIP2-206ENST00000560428 DEFA4P12838 97 aa13.66□□□□□ -0.22
TNFAIP2-206ENST00000560428 HLA-DMAP28067 261 aa13.66□□□□□ -0.22
TNFAIP2-206ENST00000560428 ERVK-16P61578 105 aa13.66□□□□□ -0.22
TNFAIP2-206ENST00000560428 GTSCR1Q86UQ5 136 aa13.66□□□□□ -0.22
TNFAIP2-206ENST00000560428 CCDC140Q96MF4 163 aa13.66□□□□□ -0.22
TNFAIP2-206ENST00000560428 RCHY1Q96PM5 261 aa13.66□□□□□ -0.22
TNFAIP2-206ENST00000560428 QTRT1Q9BXR0 403 aaKnown RBP13.66□□□□□ -0.22
TNFAIP2-206ENST00000560428 ZMAT4Q9H898 229 aa13.66□□□□□ -0.22
TNFAIP2-206ENST00000560428 C19orf73Q9NVV2 129 aa13.66□□□□□ -0.22
TNFAIP2-206ENST00000560428 TRBV7-1A0A0A6YYK4 115 aa13.65□□□□□ -0.22
TNFAIP2-206ENST00000560428 GABARAPO95166 117 aa13.65□□□□□ -0.22
TNFAIP2-206ENST00000560428 REG1AP05451 166 aa13.65□□□□□ -0.22
TNFAIP2-206ENST00000560428 SMIM18P0DKX4 95 aa13.65□□□□□ -0.22
TNFAIP2-206ENST00000560428 ELK1P19419 428 aa13.65□□□□□ -0.22
TNFAIP2-206ENST00000560428 RCVRNP35243 200 aa13.65□□□□□ -0.22
TNFAIP2-206ENST00000560428 ARL3P36405 182 aa13.65□□□□□ -0.22
TNFAIP2-206ENST00000560428 LPCAT3Q6P1A2 487 aa13.65□□□□□ -0.22
TNFAIP2-206ENST00000560428 HSD17B13Q7Z5P4 300 aaPredicted RBP13.65□□□□□ -0.22
TNFAIP2-206ENST00000560428 GPHB5Q86YW7 130 aa13.65□□□□□ -0.22
TNFAIP2-206ENST00000560428 AP3S1Q92572 193 aa13.65□□□□□ -0.22
TNFAIP2-206ENST00000560428 DGCR14Q96DF8 476 aaKnown RBP13.65□□□□□ -0.22
TNFAIP2-206ENST00000560428 CXorf58Q96LI9 332 aa13.65□□□□□ -0.22
TNFAIP2-206ENST00000560428 FAM212BQ9NTI7 297 aaPredicted RBP13.65□□□□□ -0.22
TNFAIP2-206ENST00000560428 HPGDSO60760 199 aa13.64□□□□□ -0.23
TNFAIP2-206ENST00000560428 TSPAN5P62079 268 aa13.64□□□□□ -0.23
TNFAIP2-206ENST00000560428 CTF1Q16619 201 aa13.64□□□□□ -0.23
TNFAIP2-206ENST00000560428 MZT2AQ6P582 158 aa13.64□□□□□ -0.23
TNFAIP2-206ENST00000560428 CLEC19AQ6UXS0 136 aa13.64□□□□□ -0.23
TNFAIP2-206ENST00000560428 ADAMTSL5Q6ZMM2 481 aa13.64□□□□□ -0.23
TNFAIP2-206ENST00000560428 SNX29P2Q8IUI4 249 aa13.64□□□□□ -0.23
TNFAIP2-206ENST00000560428 LAX1Q8IWV1 398 aa13.64□□□□□ -0.23
TNFAIP2-206ENST00000560428 TM2D3Q9BRN9 247 aa13.64□□□□□ -0.23
TNFAIP2-206ENST00000560428 THYN1Q9P016 225 aa13.64□□□□□ -0.23
TNFAIP2-206ENST00000560428 IZUMO1RA6ND01 250 aa13.63□□□□□ -0.23
TNFAIP2-206ENST00000560428 C2orf70A6NJV1 201 aa13.63□□□□□ -0.23
TNFAIP2-206ENST00000560428 CYB5BO43169 146 aa13.63□□□□□ -0.23
TNFAIP2-206ENST00000560428 OR2C1O95371 312 aa13.63□□□□□ -0.23
TNFAIP2-206ENST00000560428 IGHV3-23P01764 117 aa13.63□□□□□ -0.23
TNFAIP2-206ENST00000560428 HLA-AP01891 365 aaKnown RBP13.63□□□□□ -0.23
TNFAIP2-206ENST00000560428 TRAPPC2P0DI81 140 aa13.63□□□□□ -0.23
TNFAIP2-206ENST00000560428 TRAPPC2BP0DI82 140 aa13.63□□□□□ -0.23
TNFAIP2-206ENST00000560428 S100GP29377 79 aa13.63□□□□□ -0.23
TNFAIP2-206ENST00000560428 LPAR6P43657 344 aa13.63□□□□□ -0.23
TNFAIP2-206ENST00000560428 ZNF585BQ52M93 769 aa13.63□□□□□ -0.23
TNFAIP2-206ENST00000560428 FCAMRQ8WWV6 532 aa13.63□□□□□ -0.23
TNFAIP2-206ENST00000560428 TECRQ9NZ01 308 aaKnown RBP13.63□□□□□ -0.23
TNFAIP2-206ENST00000560428 MFSD2BA6NFX1 497 aa13.62□□□□□ -0.23
TNFAIP2-206ENST00000560428 A8MWP6 167 aa13.62□□□□□ -0.23
TNFAIP2-206ENST00000560428 C3orf84H3BNL1 204 aa13.62□□□□□ -0.23
TNFAIP2-206ENST00000560428 TPPPO94811 219 aa13.62□□□□□ -0.23
TNFAIP2-206ENST00000560428 RPA2P15927 270 aa13.62□□□□□ -0.23
TNFAIP2-206ENST00000560428 ZNF182P17025 639 aaPredicted RBP13.62□□□□□ -0.23
TNFAIP2-206ENST00000560428 UCP3P55916 312 aa13.62□□□□□ -0.23
TNFAIP2-206ENST00000560428 CD300EQ496F6 205 aaPredicted RBP13.62□□□□□ -0.23
TNFAIP2-206ENST00000560428 FAM106AQ4KMX7 169 aa13.62□□□□□ -0.23
TNFAIP2-206ENST00000560428 GDPD1Q8N9F7 314 aa13.62□□□□□ -0.23
TNFAIP2-206ENST00000560428 OR1L8Q8NGR8 309 aa13.62□□□□□ -0.23
TNFAIP2-206ENST00000560428 DYNLRB2Q8TF09 96 aa13.62□□□□□ -0.23
TNFAIP2-206ENST00000560428 NAA50Q9GZZ1 169 aaKnown RBP13.62□□□□□ -0.23
TNFAIP2-206ENST00000560428 NBEAL2Q6ZNJ1 2754 aa13.62□□□□□ -0.23
TNFAIP2-206ENST00000560428 TEX50A0A1B0GTY4 177 aa13.61□□□□□ -0.23
TNFAIP2-206ENST00000560428 FAM25AB3EWG3 89 aa13.61□□□□□ -0.23
TNFAIP2-206ENST00000560428 FAM25CB3EWG5 89 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms