RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 H2BFWTQ7Z2G1 175 aa7.41□□□□□ -1.22
HERC1-206ENST00000559996 C16orf82Q7Z2V1 217 aa7.41□□□□□ -1.22
HERC1-206ENST00000559996 ZNF429Q86V71 674 aa7.41□□□□□ -1.22
HERC1-206ENST00000559996 FOXRED2Q8IWF2 684 aa7.41□□□□□ -1.22
HERC1-206ENST00000559996 DMBX1Q8NFW5 382 aa7.41□□□□□ -1.22
HERC1-206ENST00000559996 OR4A5Q8NH83 315 aa7.41□□□□□ -1.22
HERC1-206ENST00000559996 CLCC1Q96S66 551 aa7.41□□□□□ -1.22
HERC1-206ENST00000559996 AIFM2Q9BRQ8 373 aa7.41□□□□□ -1.22
HERC1-206ENST00000559996 QTRT1Q9BXR0 403 aaKnown RBP7.41□□□□□ -1.22
HERC1-206ENST00000559996 C11orf1Q9H5F2 150 aa7.41□□□□□ -1.22
HERC1-206ENST00000559996 RANBP3Q9H6Z4 567 aaPredicted RBP7.41□□□□□ -1.22
HERC1-206ENST00000559996 CACNG5Q9UF02 275 aa7.41□□□□□ -1.22
HERC1-206ENST00000559996 FOXA2Q9Y261 457 aaPredicted RBP7.41□□□□□ -1.22
HERC1-206ENST00000559996 MOB4Q9Y3A3 225 aa7.41□□□□□ -1.22
HERC1-206ENST00000559996 hCG_2014768A0A024R1R8 64 aa7.4□□□□□ -1.22
HERC1-206ENST00000559996 C15orf61A6NNL5 157 aa7.4□□□□□ -1.22
HERC1-206ENST00000559996 TEX22C9J3V5 150 aa7.4□□□□□ -1.22
HERC1-206ENST00000559996 GOSR2O14653 212 aa7.4□□□□□ -1.22
HERC1-206ENST00000559996 ST8SIA3O43173 380 aa7.4□□□□□ -1.22
HERC1-206ENST00000559996 SSNA1O43805 119 aa7.4□□□□□ -1.22
HERC1-206ENST00000559996 GPR137BO60478 399 aa7.4□□□□□ -1.22
HERC1-206ENST00000559996 CA2P00918 260 aa7.4□□□□□ -1.22
HERC1-206ENST00000559996 IGHG2P01859 326 aa7.4□□□□□ -1.22
HERC1-206ENST00000559996 HLA-DRB1P01911 266 aa7.4□□□□□ -1.22
HERC1-206ENST00000559996 RPL8P62917 257 aaKnown RBP7.4□□□□□ -1.22
HERC1-206ENST00000559996 UBA52P62987 128 aaKnown RBP7.4□□□□□ -1.22
HERC1-206ENST00000559996 SRSF2Q01130 221 aaKnown RBP7.4□□□□□ -1.22
HERC1-206ENST00000559996 SMCO1Q147U7 214 aa7.4□□□□□ -1.22
HERC1-206ENST00000559996 C19orf54Q5BKX5 351 aa7.4□□□□□ -1.22
HERC1-206ENST00000559996 C10orf55Q5SWW7 151 aa7.4□□□□□ -1.22
HERC1-206ENST00000559996 ASPHD1Q5U4P2 390 aa7.4□□□□□ -1.22
HERC1-206ENST00000559996 Q8N2B8 174 aa7.4□□□□□ -1.22
HERC1-206ENST00000559996 ZBTB8BQ8NAP8 495 aaPredicted RBP7.4□□□□□ -1.22
HERC1-206ENST00000559996 VSTM2AQ8TAG5 236 aa7.4□□□□□ -1.22
HERC1-206ENST00000559996 RRNAD1Q96FB5 475 aaKnown RBP7.4□□□□□ -1.22
HERC1-206ENST00000559996 ST6GAL2Q96JF0 529 aa7.4□□□□□ -1.22
HERC1-206ENST00000559996 C2orf50Q96LR7 162 aa7.4□□□□□ -1.22
HERC1-206ENST00000559996 MED28Q9H204 178 aa7.4□□□□□ -1.22
HERC1-206ENST00000559996 ZNF702PQ9H963 129 aa7.4□□□□□ -1.22
HERC1-206ENST00000559996 NDUFA4L2Q9NRX3 87 aa7.4□□□□□ -1.22
HERC1-206ENST00000559996 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.4□□□□□ -1.22
HERC1-206ENST00000559996 C1RLQ9NZP8 487 aa7.4□□□□□ -1.22
HERC1-206ENST00000559996 MGAT4CQ9UBM8 478 aa7.4□□□□□ -1.22
HERC1-206ENST00000559996 PITPNC1Q9UKF7 332 aa7.4□□□□□ -1.22
HERC1-206ENST00000559996 TEP1Q99973 2627 aaKnown RBP7.4□□□□□ -1.23
HERC1-206ENST00000559996 C13orf42A0A1B0GVH6 325 aa7.39□□□□□ -1.23
HERC1-206ENST00000559996 H0YIZ8 118 aa7.39□□□□□ -1.23
HERC1-206ENST00000559996 ATG12O94817 140 aa7.39□□□□□ -1.23
HERC1-206ENST00000559996 TMEM50AO95807 157 aa7.39□□□□□ -1.23
HERC1-206ENST00000559996 MBPP02686 304 aaPredicted RBP7.39□□□□□ -1.23
HERC1-206ENST00000559996 RNASE1P07998 156 aaKnown RBP7.39□□□□□ -1.23
HERC1-206ENST00000559996 MAS1LP35410 378 aa7.39□□□□□ -1.23
HERC1-206ENST00000559996 COMPP49747 757 aaPredicted RBP7.39□□□□□ -1.23
HERC1-206ENST00000559996 AKR1C2P52895 323 aa7.39□□□□□ -1.23
HERC1-206ENST00000559996 CRIP2P52943 208 aaPredicted RBP7.39□□□□□ -1.23
HERC1-206ENST00000559996 PAX9P55771 341 aa7.39□□□□□ -1.23
HERC1-206ENST00000559996 OR2B8PP59922 312 aa7.39□□□□□ -1.23
HERC1-206ENST00000559996 ERVK-16P61578 105 aa7.39□□□□□ -1.23
HERC1-206ENST00000559996 HSPE1P61604 102 aaKnown RBP7.39□□□□□ -1.23
HERC1-206ENST00000559996 CD300CQ08708 224 aa7.39□□□□□ -1.23
HERC1-206ENST00000559996 IAH1Q2TAA2 248 aaPredicted RBP7.39□□□□□ -1.23
HERC1-206ENST00000559996 OXLD1Q5BKU9 147 aa7.39□□□□□ -1.23
HERC1-206ENST00000559996 GSG1LQ6UXU4 331 aa7.39□□□□□ -1.23
HERC1-206ENST00000559996 MMD2Q8IY49 270 aa7.39□□□□□ -1.23
HERC1-206ENST00000559996 OR52E5Q8NH55 327 aa7.39□□□□□ -1.23
HERC1-206ENST00000559996 FYTTD1Q96QD9 318 aaKnown RBP7.39□□□□□ -1.23
HERC1-206ENST00000559996 RASL11BQ9BPW5 248 aa7.39□□□□□ -1.23
HERC1-206ENST00000559996 RNF126Q9BV68 326 aa7.39□□□□□ -1.23
HERC1-206ENST00000559996 NMES1Q9C002 83 aa7.39□□□□□ -1.23
HERC1-206ENST00000559996 KIAA1456Q9P272 454 aa7.39□□□□□ -1.23
HERC1-206ENST00000559996 HSPB7Q9UBY9 170 aa7.39□□□□□ -1.23
HERC1-206ENST00000559996 ZNF257Q9Y2Q1 563 aa7.39□□□□□ -1.23
HERC1-206ENST00000559996 TRAV14DV4A0A0A6YYC5 116 aa7.38□□□□□ -1.23
HERC1-206ENST00000559996 C5orf51A6NDU8 294 aa7.38□□□□□ -1.23
HERC1-206ENST00000559996 INS-IGF2F8WCM5 200 aa7.38□□□□□ -1.23
HERC1-206ENST00000559996 TSPAN9O75954 239 aa7.38□□□□□ -1.23
HERC1-206ENST00000559996 IFNA21P01568 189 aa7.38□□□□□ -1.23
HERC1-206ENST00000559996 OPN1MWP04001 364 aa7.38□□□□□ -1.23
HERC1-206ENST00000559996 TRAPPC2P0DI81 140 aa7.38□□□□□ -1.23
HERC1-206ENST00000559996 TRAPPC2BP0DI82 140 aa7.38□□□□□ -1.23
HERC1-206ENST00000559996 OPN1MW2P0DN77 364 aa7.38□□□□□ -1.23
HERC1-206ENST00000559996 OPN1MW3P0DN78 364 aa7.38□□□□□ -1.23
HERC1-206ENST00000559996 VDAC2P45880 294 aaPredicted RBP7.38□□□□□ -1.23
HERC1-206ENST00000559996 SCGB2A2Q13296 93 aa7.38□□□□□ -1.23
HERC1-206ENST00000559996 FXYD3Q14802 87 aa7.38□□□□□ -1.23
HERC1-206ENST00000559996 Q6ZSV7 163 aa7.38□□□□□ -1.23
HERC1-206ENST00000559996 OR10W1Q8NGF6 305 aa7.38□□□□□ -1.23
HERC1-206ENST00000559996 OR4A16Q8NH70 328 aa7.38□□□□□ -1.23
HERC1-206ENST00000559996 ZNF418Q8TF45 676 aaPredicted RBP7.38□□□□□ -1.23
HERC1-206ENST00000559996 NEURL2Q9BR09 285 aa7.38□□□□□ -1.23
HERC1-206ENST00000559996 ZNF436Q9C0F3 470 aaPredicted RBP7.38□□□□□ -1.23
HERC1-206ENST00000559996 PRNDQ9UKY0 176 aa7.38□□□□□ -1.23
HERC1-206ENST00000559996 RCL1Q9Y2P8 373 aaKnown RBP7.38□□□□□ -1.23
HERC1-206ENST00000559996 OR51B2Q9Y5P1 312 aa7.38□□□□□ -1.23
HERC1-206ENST00000559996 PIGBOS1A0A0B4J2F0 54 aa7.37□□□□□ -1.23
HERC1-206ENST00000559996 IGLC7A0M8Q6 106 aa7.37□□□□□ -1.23
HERC1-206ENST00000559996 MSGN1A6NI15 193 aa7.37□□□□□ -1.23
HERC1-206ENST00000559996 FAM25EA8MYX2 175 aa7.37□□□□□ -1.23
HERC1-206ENST00000559996 K7EPK0 472 aa7.37□□□□□ -1.23
HERC1-206ENST00000559996 M0QZK8 103 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms