RNA–Protein interactions for RNA: ENST00000559873.5

USP3-216, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-216ENST00000559873 OR5M8Q8NGP6 311 aa7.94□□□□□ -1.14
USP3-216ENST00000559873 OR5B3Q8NH48 314 aa7.94□□□□□ -1.14
USP3-216ENST00000559873 COQ8AQ8NI60 647 aa7.94□□□□□ -1.14
USP3-216ENST00000559873 GLYATL2Q8WU03 294 aa7.94□□□□□ -1.14
USP3-216ENST00000559873 NOL4LQ96MY1 436 aaPredicted RBP7.94□□□□□ -1.14
USP3-216ENST00000559873 SRSF8Q9BRL6 282 aaKnown RBP7.94□□□□□ -1.14
USP3-216ENST00000559873 ZNF747Q9BV97 191 aa7.94□□□□□ -1.14
USP3-216ENST00000559873 SHPKQ9UHJ6 478 aa7.94□□□□□ -1.14
USP3-216ENST00000559873 FOXA2Q9Y261 457 aaPredicted RBP7.94□□□□□ -1.14
USP3-216ENST00000559873 TRAV6A0A075B6T7 132 aa7.93□□□□□ -1.14
USP3-216ENST00000559873 H3BUA1 57 aa7.93□□□□□ -1.14
USP3-216ENST00000559873 PTTG1O95997 202 aa7.93□□□□□ -1.14
USP3-216ENST00000559873 DHFRP00374 187 aa7.93□□□□□ -1.14
USP3-216ENST00000559873 IGKV1-39P01597 117 aa7.93□□□□□ -1.14
USP3-216ENST00000559873 IGKV1D-39P04432 117 aa7.93□□□□□ -1.14
USP3-216ENST00000559873 ELANEP08246 267 aa7.93□□□□□ -1.14
USP3-216ENST00000559873 H2AFB2P0C5Z0 115 aa7.93□□□□□ -1.14
USP3-216ENST00000559873 ANXA7P20073 488 aaKnown RBP7.93□□□□□ -1.14
USP3-216ENST00000559873 SUPT4H1P63272 117 aaKnown RBP7.93□□□□□ -1.14
USP3-216ENST00000559873 PJVKQ0ZLH3 352 aa7.93□□□□□ -1.14
USP3-216ENST00000559873 DHRS2Q13268 280 aa7.93□□□□□ -1.14
USP3-216ENST00000559873 DCTN2Q13561 401 aaKnown RBP7.93□□□□□ -1.14
USP3-216ENST00000559873 CXorf66Q5JRM2 361 aaPredicted RBP7.93□□□□□ -1.14
USP3-216ENST00000559873 KHDC1LQ5JSQ8 128 aa7.93□□□□□ -1.14
USP3-216ENST00000559873 TMEM65Q6PI78 240 aa7.93□□□□□ -1.14
USP3-216ENST00000559873 PLET1Q6UQ28 207 aa7.93□□□□□ -1.14
USP3-216ENST00000559873 LYG2Q86SG7 212 aa7.93□□□□□ -1.14
USP3-216ENST00000559873 SELENOHQ8IZQ5 122 aaKnown RBP7.93□□□□□ -1.14
USP3-216ENST00000559873 SLC35G3Q8N808 338 aa7.93□□□□□ -1.14
USP3-216ENST00000559873 LFNGQ8NES3 379 aa7.93□□□□□ -1.14
USP3-216ENST00000559873 CASTOR1Q8WTX7 329 aa7.93□□□□□ -1.14
USP3-216ENST00000559873 LSM10Q969L4 123 aaKnown RBP7.93□□□□□ -1.14
USP3-216ENST00000559873 FYTTD1Q96QD9 318 aaKnown RBP7.93□□□□□ -1.14
USP3-216ENST00000559873 FAM103A1Q9BTL3 118 aaKnown RBP7.93□□□□□ -1.14
USP3-216ENST00000559873 ALX4Q9H161 411 aaPredicted RBP7.93□□□□□ -1.14
USP3-216ENST00000559873 LINC00527Q9UJ94 153 aa7.93□□□□□ -1.14
USP3-216ENST00000559873 ZNF257Q9Y2Q1 563 aa7.93□□□□□ -1.14
USP3-216ENST00000559873 A0A1W2PN81 502 aa7.92□□□□□ -1.14
USP3-216ENST00000559873 C9orf170A2RU37 121 aa7.92□□□□□ -1.14
USP3-216ENST00000559873 LINC01548A6NM66 108 aa7.92□□□□□ -1.14
USP3-216ENST00000559873 CYB5BO43169 146 aa7.92□□□□□ -1.14
USP3-216ENST00000559873 PRAF2O60831 178 aa7.92□□□□□ -1.14
USP3-216ENST00000559873 DUS4LO95620 317 aaKnown RBP7.92□□□□□ -1.14
USP3-216ENST00000559873 IGKV1-5P01602 117 aa7.92□□□□□ -1.14
USP3-216ENST00000559873 IGHG4P01861 327 aa7.92□□□□□ -1.14
USP3-216ENST00000559873 IL6RP08887 468 aaPredicted RBP7.92□□□□□ -1.14
USP3-216ENST00000559873 CHRNA7P36544 502 aa7.92□□□□□ -1.14
USP3-216ENST00000559873 OR2B8PP59922 312 aa7.92□□□□□ -1.14
USP3-216ENST00000559873 IFITM3Q01628 133 aa7.92□□□□□ -1.14
USP3-216ENST00000559873 CFHR3Q02985 330 aa7.92□□□□□ -1.14
USP3-216ENST00000559873 FOXE3Q13461 319 aa7.92□□□□□ -1.14
USP3-216ENST00000559873 NRARPQ7Z6K4 114 aa7.92□□□□□ -1.14
USP3-216ENST00000559873 ZNF429Q86V71 674 aa7.92□□□□□ -1.14
USP3-216ENST00000559873 LRTM2Q8N967 370 aa7.92□□□□□ -1.14
USP3-216ENST00000559873 OR1L8Q8NGR8 309 aa7.92□□□□□ -1.14
USP3-216ENST00000559873 QTRT1Q9BXR0 403 aaKnown RBP7.92□□□□□ -1.14
USP3-216ENST00000559873 SLA2Q9H6Q3 261 aa7.92□□□□□ -1.14
USP3-216ENST00000559873 GPN1Q9HCN4 374 aaPredicted RBP7.92□□□□□ -1.14
USP3-216ENST00000559873 FLVCR2Q9UPI3 526 aa7.92□□□□□ -1.14
USP3-216ENST00000559873 FBXO7Q9Y3I1 522 aa7.92□□□□□ -1.14
USP3-216ENST00000559873 TMED3Q9Y3Q3 217 aa7.92□□□□□ -1.14
USP3-216ENST00000559873 OR51B2Q9Y5P1 312 aa7.92□□□□□ -1.14
USP3-216ENST00000559873 WSB1Q9Y6I7 421 aa7.92□□□□□ -1.14
USP3-216ENST00000559873 TNCP24821 2201 aa7.92□□□□□ -1.14
USP3-216ENST00000559873 TRAV3A0A0B4J244 114 aa7.91□□□□□ -1.14
USP3-216ENST00000559873 TCRBV4S1A1TA0A5B7 111 aa7.91□□□□□ -1.14
USP3-216ENST00000559873 MSGN1A6NI15 193 aa7.91□□□□□ -1.14
USP3-216ENST00000559873 G3V318 75 aa7.91□□□□□ -1.14
USP3-216ENST00000559873 IFNA21P01568 189 aa7.91□□□□□ -1.14
USP3-216ENST00000559873 OR9G9P0C7N8 305 aa7.91□□□□□ -1.14
USP3-216ENST00000559873 TRAPPC2P0DI81 140 aa7.91□□□□□ -1.14
USP3-216ENST00000559873 TRAPPC2BP0DI82 140 aa7.91□□□□□ -1.14
USP3-216ENST00000559873 SULT1A3P0DMM9 295 aa7.91□□□□□ -1.14
USP3-216ENST00000559873 SULT1A4P0DMN0 295 aa7.91□□□□□ -1.14
USP3-216ENST00000559873 PF4V1P10720 104 aa7.91□□□□□ -1.14
USP3-216ENST00000559873 MECP2P51608 486 aaKnown RBP7.91□□□□□ -1.14
USP3-216ENST00000559873 SSBP2P81877 361 aaPredicted RBP7.91□□□□□ -1.14
USP3-216ENST00000559873 MRGPRG-AS1Q2M3A8 158 aa7.91□□□□□ -1.14
USP3-216ENST00000559873 C10orf55Q5SWW7 151 aa7.91□□□□□ -1.14
USP3-216ENST00000559873 ZNF329Q86UD4 541 aa7.91□□□□□ -1.14
USP3-216ENST00000559873 MINDY2Q8NBR6 621 aa7.91□□□□□ -1.14
USP3-216ENST00000559873 DUSP18Q8NEJ0 188 aa7.91□□□□□ -1.14
USP3-216ENST00000559873 LHFPL5Q8TAF8 219 aa7.91□□□□□ -1.14
USP3-216ENST00000559873 FAM110DQ8TAY7 271 aaPredicted RBP7.91□□□□□ -1.14
USP3-216ENST00000559873 WIPF2Q8TF74 440 aaPredicted RBP7.91□□□□□ -1.14
USP3-216ENST00000559873 CITED1Q99966 193 aa7.91□□□□□ -1.14
USP3-216ENST00000559873 HINT2Q9BX68 163 aa7.91□□□□□ -1.14
USP3-216ENST00000559873 PLEKHA3Q9HB20 300 aa7.91□□□□□ -1.14
USP3-216ENST00000559873 ENY2Q9NPA8 101 aa7.91□□□□□ -1.14
USP3-216ENST00000559873 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.91□□□□□ -1.14
USP3-216ENST00000559873 ZNF355PQ9NSJ1 428 aa7.91□□□□□ -1.14
USP3-216ENST00000559873 ZFP57Q9NU63 452 aa7.91□□□□□ -1.14
USP3-216ENST00000559873 TMEM14BQ9NUH8 114 aa7.91□□□□□ -1.14
USP3-216ENST00000559873 COA4Q9NYJ1 87 aa7.91□□□□□ -1.14
USP3-216ENST00000559873 NSG2Q9Y328 171 aa7.91□□□□□ -1.14
USP3-216ENST00000559873 TSSC4Q9Y5U2 329 aaPredicted RBP7.91□□□□□ -1.14
USP3-216ENST00000559873 ANK2Q01484 3957 aa7.9□□□□□ -1.14
USP3-216ENST00000559873 PLXNB1O43157 2135 aa7.9□□□□□ -1.14
USP3-216ENST00000559873 NPIPB5A8MRT5 1133 aa7.9□□□□□ -1.14
USP3-216ENST00000559873 INMT-MINDY4F8WBC2 141 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms