RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 OR13D1Q8NGV5 346 aa14.48□□□□□ -0.09
SNX1-208ENST00000559844 TMEM186Q96B77 213 aa14.48□□□□□ -0.09
SNX1-208ENST00000559844 TIMD4Q96H15 378 aa14.48□□□□□ -0.09
SNX1-208ENST00000559844 HEYLQ9NQ87 328 aaPredicted RBP14.48□□□□□ -0.09
SNX1-208ENST00000559844 PRNDQ9UKY0 176 aa14.48□□□□□ -0.09
SNX1-208ENST00000559844 TCF19Q9Y242 345 aa14.48□□□□□ -0.09
SNX1-208ENST00000559844 IGHV2-70P01814 119 aa14.47□□□□□ -0.09
SNX1-208ENST00000559844 GPR6P46095 362 aaPredicted RBP14.47□□□□□ -0.09
SNX1-208ENST00000559844 PPT1P50897 306 aa14.47□□□□□ -0.09
SNX1-208ENST00000559844 ERVFRD-1P60508 538 aa14.47□□□□□ -0.09
SNX1-208ENST00000559844 CLEC12BQ2HXU8 276 aa14.47□□□□□ -0.09
SNX1-208ENST00000559844 SFT2D1Q8WV19 159 aa14.47□□□□□ -0.09
SNX1-208ENST00000559844 TRAV3A0A0B4J244 114 aa14.47□□□□□ -0.09
SNX1-208ENST00000559844 A0A1B0GV50 99 aa14.47□□□□□ -0.09
SNX1-208ENST00000559844 A0A1W2PPH5 198 aa14.47□□□□□ -0.09
SNX1-208ENST00000559844 RBFOX3A6NFN3 312 aa14.47□□□□□ -0.09
SNX1-208ENST00000559844 J3QR06 171 aa14.47□□□□□ -0.09
SNX1-208ENST00000559844 IFNA10P01566 189 aa14.47□□□□□ -0.09
SNX1-208ENST00000559844 HOXA1P49639 335 aaPredicted RBP14.47□□□□□ -0.09
SNX1-208ENST00000559844 HSPE1P61604 102 aaKnown RBP14.47□□□□□ -0.09
SNX1-208ENST00000559844 OR10X1Q8NGY0 326 aa14.47□□□□□ -0.09
SNX1-208ENST00000559844 OSR1Q8TAX0 266 aaPredicted RBP14.47□□□□□ -0.09
SNX1-208ENST00000559844 RAB1CQ92928 201 aa14.47□□□□□ -0.09
SNX1-208ENST00000559844 PIMREGQ9BSJ6 248 aa14.47□□□□□ -0.09
SNX1-208ENST00000559844 GGACTQ9BVM4 153 aa14.47□□□□□ -0.09
SNX1-208ENST00000559844 ENY2Q9NPA8 101 aa14.47□□□□□ -0.09
SNX1-208ENST00000559844 RPRMQ9NS64 109 aa14.47□□□□□ -0.09
SNX1-208ENST00000559844 TMEM14BQ9NUH8 114 aa14.47□□□□□ -0.09
SNX1-208ENST00000559844 DNASE2O00115 360 aaPredicted RBP14.46□□□□□ -0.09
SNX1-208ENST00000559844 MBP02144 154 aa14.46□□□□□ -0.09
SNX1-208ENST00000559844 FGF7P21781 194 aa14.46□□□□□ -0.09
SNX1-208ENST00000559844 OR9G1Q8NH87 305 aa14.46□□□□□ -0.09
SNX1-208ENST00000559844 C10orf105Q8TEF2 133 aa14.46□□□□□ -0.09
SNX1-208ENST00000559844 MBD3L1Q8WWY6 194 aa14.46□□□□□ -0.09
SNX1-208ENST00000559844 FOXC2Q99958 501 aa14.46□□□□□ -0.09
SNX1-208ENST00000559844 BPESC1Q9GZL8 116 aa14.46□□□□□ -0.09
SNX1-208ENST00000559844 SLC35B3Q9H1N7 401 aa14.46□□□□□ -0.09
SNX1-208ENST00000559844 C17orf112F2Z3M2 114 aa14.45□□□□□ -0.1
SNX1-208ENST00000559844 NDUFS8O00217 210 aa14.45□□□□□ -0.1
SNX1-208ENST00000559844 IL6RP08887 468 aaPredicted RBP14.45□□□□□ -0.1
SNX1-208ENST00000559844 DSCR9P59020 149 aa14.45□□□□□ -0.1
SNX1-208ENST00000559844 RAB11AP62491 216 aa14.45□□□□□ -0.1
SNX1-208ENST00000559844 CCL20P78556 96 aa14.45□□□□□ -0.1
SNX1-208ENST00000559844 MRPL20Q9BYC9 149 aaKnown RBP14.45□□□□□ -0.1
SNX1-208ENST00000559844 ZNF257Q9Y2Q1 563 aa14.45□□□□□ -0.1
SNX1-208ENST00000559844 IGHV4-30-2A0A087WSY4 118 aa14.45□□□□□ -0.1
SNX1-208ENST00000559844 UPK2O00526 184 aa14.45□□□□□ -0.1
SNX1-208ENST00000559844 IGHV1-8P0DP01 117 aa14.45□□□□□ -0.1
SNX1-208ENST00000559844 IL3RAP26951 378 aa14.45□□□□□ -0.1
SNX1-208ENST00000559844 KRTAP1-3Q8IUG1 177 aa14.45□□□□□ -0.1
SNX1-208ENST00000559844 ZNF709Q8N972 641 aa14.45□□□□□ -0.1
SNX1-208ENST00000559844 OR5AN1Q8NGI8 311 aa14.45□□□□□ -0.1
SNX1-208ENST00000559844 TNFRSF14Q92956 283 aa14.45□□□□□ -0.1
SNX1-208ENST00000559844 FKBP11Q9NYL4 201 aa14.45□□□□□ -0.1
SNX1-208ENST00000559844 BET1LQ9NYM9 111 aa14.45□□□□□ -0.1
SNX1-208ENST00000559844 ZNRD1Q9P1U0 126 aa14.45□□□□□ -0.1
SNX1-208ENST00000559844 DOCK11Q5JSL3 2073 aa14.45□□□□□ -0.1
SNX1-208ENST00000559844 SOX15O60248 233 aa14.44□□□□□ -0.1
SNX1-208ENST00000559844 ZNF137PP52743 207 aa14.44□□□□□ -0.1
SNX1-208ENST00000559844 PRSS57Q6UWY2 283 aa14.44□□□□□ -0.1
SNX1-208ENST00000559844 ETV3LQ6ZN32 361 aa14.44□□□□□ -0.1
SNX1-208ENST00000559844 OR51B2Q9Y5P1 312 aa14.44□□□□□ -0.1
SNX1-208ENST00000559844 MYO9AB2RTY4 2548 aa14.44□□□□□ -0.1
SNX1-208ENST00000559844 VPS13CQ709C8 3753 aa14.44□□□□□ -0.1
SNX1-208ENST00000559844 H0YJW9 148 aa14.43□□□□□ -0.1
SNX1-208ENST00000559844 TSPAN4O14817 238 aa14.43□□□□□ -0.1
SNX1-208ENST00000559844 MDKP21741 143 aaPredicted RBP14.43□□□□□ -0.1
SNX1-208ENST00000559844 TMEM177Q53S58 311 aa14.43□□□□□ -0.1
SNX1-208ENST00000559844 ZNF506Q5JVG8 444 aa14.43□□□□□ -0.1
SNX1-208ENST00000559844 ZNF841Q6ZN19 808 aa14.43□□□□□ -0.1
SNX1-208ENST00000559844 PDPNQ86YL7 162 aa14.43□□□□□ -0.1
SNX1-208ENST00000559844 ABHD12Q8N2K0 398 aa14.43□□□□□ -0.1
SNX1-208ENST00000559844 PCGF1Q9BSM1 259 aa14.43□□□□□ -0.1
SNX1-208ENST00000559844 TMEM133Q9H2Q1 129 aa14.43□□□□□ -0.1
SNX1-208ENST00000559844 VSIRQ9H7M9 311 aa14.43□□□□□ -0.1
SNX1-208ENST00000559844 UNKLQ9H9P5 680 aaKnown RBP14.43□□□□□ -0.1
SNX1-208ENST00000559844 MIOXQ9UGB7 285 aa14.43□□□□□ -0.1
SNX1-208ENST00000559844 VWC2LB2RUY7 222 aa14.43□□□□□ -0.1
SNX1-208ENST00000559844 H7C2Y5 167 aa14.43□□□□□ -0.1
SNX1-208ENST00000559844 CD1BP29016 333 aa14.43□□□□□ -0.1
SNX1-208ENST00000559844 RPS16P62249 146 aaKnown RBP14.43□□□□□ -0.1
SNX1-208ENST00000559844 DLK1P80370 383 aa14.43□□□□□ -0.1
SNX1-208ENST00000559844 CLRN3Q8NCR9 226 aa14.43□□□□□ -0.1
SNX1-208ENST00000559844 OR8B3Q8NGG8 313 aa14.43□□□□□ -0.1
SNX1-208ENST00000559844 RCC1LQ96I51 464 aaKnown RBP14.43□□□□□ -0.1
SNX1-208ENST00000559844 OR8B2Q96RD0 313 aa14.43□□□□□ -0.1
SNX1-208ENST00000559844 NPCDR1Q9BY65 106 aa14.43□□□□□ -0.1
SNX1-208ENST00000559844 WDR83OSQ9Y284 106 aa14.43□□□□□ -0.1
SNX1-208ENST00000559844 FAM74A7A6NL05 159 aa14.42□□□□□ -0.1
SNX1-208ENST00000559844 MPDU1O75352 247 aa14.42□□□□□ -0.1
SNX1-208ENST00000559844 KBTBD11O94819 623 aa14.42□□□□□ -0.1
SNX1-208ENST00000559844 RBP4P02753 201 aa14.42□□□□□ -0.1
SNX1-208ENST00000559844 IGKV1-16P04430 117 aa14.42□□□□□ -0.1
SNX1-208ENST00000559844 NPBWR1P48145 328 aa14.42□□□□□ -0.1
SNX1-208ENST00000559844 ELLP55199 621 aaPredicted RBP14.42□□□□□ -0.1
SNX1-208ENST00000559844 FAM74A3Q4VXF1 159 aa14.42□□□□□ -0.1
SNX1-208ENST00000559844 CLDND2Q8NHS1 167 aa14.42□□□□□ -0.1
SNX1-208ENST00000559844 ST6GALNAC6Q969X2 333 aa14.42□□□□□ -0.1
SNX1-208ENST00000559844 NEIL1Q96FI4 390 aaPredicted RBP14.42□□□□□ -0.1
SNX1-208ENST00000559844 Q96MF0 132 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms