RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 KLK9Q2XQG4 91 aa11.26□□□□□ -0.61
LRRC28-213ENST00000559399 DEFB125Q8N687 156 aa11.26□□□□□ -0.61
LRRC28-213ENST00000559399 CACNG8Q8WXS5 425 aa11.26□□□□□ -0.61
LRRC28-213ENST00000559399 SLC5A7Q9GZV3 580 aa11.26□□□□□ -0.61
LRRC28-213ENST00000559399 RNF167Q9H6Y7 350 aa11.26□□□□□ -0.61
LRRC28-213ENST00000559399 SRD5A3Q9H8P0 318 aa11.26□□□□□ -0.61
LRRC28-213ENST00000559399 KLK9Q9UKQ9 250 aa11.26□□□□□ -0.61
LRRC28-213ENST00000559399 SACSQ9NZJ4 4579 aa11.26□□□□□ -0.61
LRRC28-213ENST00000559399 IGLV11-55A0A075B6I3 123 aa11.25□□□□□ -0.61
LRRC28-213ENST00000559399 ZNF320A2RRD8 509 aa11.25□□□□□ -0.61
LRRC28-213ENST00000559399 TMEM213A2RRL7 107 aa11.25□□□□□ -0.61
LRRC28-213ENST00000559399 A8MWP6 167 aa11.25□□□□□ -0.61
LRRC28-213ENST00000559399 OR11H12B2RN74 326 aa11.25□□□□□ -0.61
LRRC28-213ENST00000559399 SULT1C2O00338 296 aa11.25□□□□□ -0.61
LRRC28-213ENST00000559399 REG1AP05451 166 aa11.25□□□□□ -0.61
LRRC28-213ENST00000559399 MYOD1P15172 320 aa11.25□□□□□ -0.61
LRRC28-213ENST00000559399 CBLN1P23435 193 aa11.25□□□□□ -0.61
LRRC28-213ENST00000559399 TAS2R31P59538 309 aa11.25□□□□□ -0.61
LRRC28-213ENST00000559399 FXYD4P59646 89 aa11.25□□□□□ -0.61
LRRC28-213ENST00000559399 OR2B8PP59922 312 aa11.25□□□□□ -0.61
LRRC28-213ENST00000559399 FAM106AQ4KMX7 169 aa11.25□□□□□ -0.61
LRRC28-213ENST00000559399 WDR89Q96FK6 387 aaPredicted RBP11.25□□□□□ -0.61
LRRC28-213ENST00000559399 CXorf58Q96LI9 332 aa11.25□□□□□ -0.61
LRRC28-213ENST00000559399 FAM110AQ9BQ89 295 aa11.25□□□□□ -0.61
LRRC28-213ENST00000559399 WFDC10AQ9H1F0 79 aa11.25□□□□□ -0.61
LRRC28-213ENST00000559399 AUNIPQ9H7T9 357 aa11.25□□□□□ -0.61
LRRC28-213ENST00000559399 DIABLOQ9NR28 239 aa11.25□□□□□ -0.61
LRRC28-213ENST00000559399 TRBV7-1A0A0A6YYK4 115 aa11.24□□□□□ -0.61
LRRC28-213ENST00000559399 RBMY1BA6NDE4 496 aaKnown RBP11.24□□□□□ -0.61
LRRC28-213ENST00000559399 RBMY1EA6NEQ0 496 aaKnown RBP11.24□□□□□ -0.61
LRRC28-213ENST00000559399 CGB1A6NKQ9 187 aa11.24□□□□□ -0.61
LRRC28-213ENST00000559399 HPRT1P00492 218 aa11.24□□□□□ -0.61
LRRC28-213ENST00000559399 FCER2P06734 321 aa11.24□□□□□ -0.61
LRRC28-213ENST00000559399 RBMY1DP0C7P1 496 aaKnown RBP11.24□□□□□ -0.61
LRRC28-213ENST00000559399 NQO2P16083 231 aa11.24□□□□□ -0.61
LRRC28-213ENST00000559399 CBX5P45973 191 aa11.24□□□□□ -0.61
LRRC28-213ENST00000559399 ZNF57Q68EA5 555 aaPredicted RBP11.24□□□□□ -0.61
LRRC28-213ENST00000559399 SLC16A13Q7RTY0 426 aa11.24□□□□□ -0.61
LRRC28-213ENST00000559399 IL17DQ8TAD2 202 aa11.24□□□□□ -0.61
LRRC28-213ENST00000559399 COMMD5Q9GZQ3 224 aa11.24□□□□□ -0.61
LRRC28-213ENST00000559399 STARD9Q9P2P6 4700 aa11.23□□□□□ -0.61
LRRC28-213ENST00000559399 MFSD2BA6NFX1 497 aa11.23□□□□□ -0.61
LRRC28-213ENST00000559399 TMEM127O75204 238 aa11.23□□□□□ -0.61
LRRC28-213ENST00000559399 NEDD8Q15843 81 aa11.23□□□□□ -0.61
LRRC28-213ENST00000559399 POU2AF1Q16633 256 aa11.23□□□□□ -0.61
LRRC28-213ENST00000559399 AADACL3Q5VUY0 350 aa11.23□□□□□ -0.61
LRRC28-213ENST00000559399 TMEM17Q86X19 198 aa11.23□□□□□ -0.61
LRRC28-213ENST00000559399 TMEM61Q8N0U2 210 aa11.23□□□□□ -0.61
LRRC28-213ENST00000559399 OR5AP2Q8NGF4 316 aa11.23□□□□□ -0.61
LRRC28-213ENST00000559399 OR51H1Q8NH63 302 aa11.23□□□□□ -0.61
LRRC28-213ENST00000559399 CD300LFQ8TDQ1 290 aa11.23□□□□□ -0.61
LRRC28-213ENST00000559399 GIMAP1Q8WWP7 306 aa11.23□□□□□ -0.61
LRRC28-213ENST00000559399 SRSF8Q9BRL6 282 aaKnown RBP11.23□□□□□ -0.61
LRRC28-213ENST00000559399 TRAV3A0A0B4J244 114 aa11.22□□□□□ -0.61
LRRC28-213ENST00000559399 IGLC7A0M8Q6 106 aa11.22□□□□□ -0.61
LRRC28-213ENST00000559399 UPK2O00526 184 aa11.22□□□□□ -0.61
LRRC28-213ENST00000559399 S1PR2O95136 353 aa11.22□□□□□ -0.61
LRRC28-213ENST00000559399 CLEC3BP05452 202 aa11.22□□□□□ -0.61
LRRC28-213ENST00000559399 FGF2P09038 288 aa11.22□□□□□ -0.61
LRRC28-213ENST00000559399 GPR183P32249 361 aa11.22□□□□□ -0.61
LRRC28-213ENST00000559399 HERV-K104P61576 105 aa11.22□□□□□ -0.61
LRRC28-213ENST00000559399 ZNF818PQ6ZRF7 136 aa11.22□□□□□ -0.61
LRRC28-213ENST00000559399 UXS1Q8NBZ7 420 aa11.22□□□□□ -0.61
LRRC28-213ENST00000559399 DMBX1Q8NFW5 382 aa11.22□□□□□ -0.61
LRRC28-213ENST00000559399 BORCS5Q969J3 196 aa11.22□□□□□ -0.61
LRRC28-213ENST00000559399 PLEKHA2Q9HB19 425 aa11.22□□□□□ -0.61
LRRC28-213ENST00000559399 IFT46Q9NQC8 304 aa11.22□□□□□ -0.61
LRRC28-213ENST00000559399 TMEM140Q9NV12 185 aa11.22□□□□□ -0.61
LRRC28-213ENST00000559399 THYN1Q9P016 225 aa11.22□□□□□ -0.61
LRRC28-213ENST00000559399 MLXQ9UH92 298 aa11.22□□□□□ -0.61
LRRC28-213ENST00000559399 SELENOKQ9Y6D0 94 aa11.22□□□□□ -0.61
LRRC28-213ENST00000559399 MEIS3P1A6NDR6 274 aa11.21□□□□□ -0.61
LRRC28-213ENST00000559399 ERVK-16P61578 105 aa11.21□□□□□ -0.61
LRRC28-213ENST00000559399 ANKRD55Q3KP44 614 aa11.21□□□□□ -0.61
LRRC28-213ENST00000559399 BTNL8Q6UX41 500 aa11.21□□□□□ -0.61
LRRC28-213ENST00000559399 UNQ9165/PRO28630Q6UXU0 137 aa11.21□□□□□ -0.61
LRRC28-213ENST00000559399 CROCCP3Q8IVE0 287 aa11.21□□□□□ -0.61
LRRC28-213ENST00000559399 OR52B4Q8NGK2 314 aa11.21□□□□□ -0.61
LRRC28-213ENST00000559399 ZNF502Q8TBZ5 544 aa11.21□□□□□ -0.61
LRRC28-213ENST00000559399 MARC2Q969Z3 335 aa11.21□□□□□ -0.61
LRRC28-213ENST00000559399 QTRT1Q9BXR0 403 aaKnown RBP11.21□□□□□ -0.61
LRRC28-213ENST00000559399 EHFQ9NZC4 300 aa11.21□□□□□ -0.61
LRRC28-213ENST00000559399 COMMD9Q9P000 198 aa11.21□□□□□ -0.61
LRRC28-213ENST00000559399 CYB5BO43169 146 aa11.2□□□□□ -0.62
LRRC28-213ENST00000559399 XRCC3O43542 346 aa11.2□□□□□ -0.62
LRRC28-213ENST00000559399 JTBO76095 146 aa11.2□□□□□ -0.62
LRRC28-213ENST00000559399 SCAF4O95104 1147 aaKnown RBP11.2□□□□□ -0.62
LRRC28-213ENST00000559399 KCTD21Q4G0X4 260 aa11.2□□□□□ -0.62
LRRC28-213ENST00000559399 TM4SF20Q53R12 229 aa11.2□□□□□ -0.62
LRRC28-213ENST00000559399 THOC7Q6I9Y2 204 aaKnown RBP11.2□□□□□ -0.62
LRRC28-213ENST00000559399 PLET1Q6UQ28 207 aa11.2□□□□□ -0.62
LRRC28-213ENST00000559399 HSD17B13Q7Z5P4 300 aaPredicted RBP11.2□□□□□ -0.62
LRRC28-213ENST00000559399 S100A16Q96FQ6 103 aaKnown RBP11.2□□□□□ -0.62
LRRC28-213ENST00000559399 GGTLC1Q9BX51 225 aa11.2□□□□□ -0.62
LRRC28-213ENST00000559399 UFC1Q9Y3C8 167 aa11.2□□□□□ -0.62
LRRC28-213ENST00000559399 TRAV25A0A0B4J276 109 aa11.19□□□□□ -0.62
LRRC28-213ENST00000559399 MARCH11A6NNE9 402 aa11.19□□□□□ -0.62
LRRC28-213ENST00000559399 RLN1P04808 185 aa11.19□□□□□ -0.62
LRRC28-213ENST00000559399 RPA2P15927 270 aa11.19□□□□□ -0.62
LRRC28-213ENST00000559399 PTBP1P26599 531 aaKnown RBP eCLIP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms