RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 ZNF702PQ9H963 129 aa13.24□□□□□ -0.29
PSEN1-224ENST00000559361 CACFD1Q9UGQ2 172 aa13.24□□□□□ -0.29
PSEN1-224ENST00000559361 SHPKQ9UHJ6 478 aa13.24□□□□□ -0.29
PSEN1-224ENST00000559361 ACTL6BO94805 426 aa13.23□□□□□ -0.29
PSEN1-224ENST00000559361 KBTBD11O94819 623 aa13.23□□□□□ -0.29
PSEN1-224ENST00000559361 KRASP01116 189 aa13.23□□□□□ -0.29
PSEN1-224ENST00000559361 AMY1AP04745 511 aa13.23□□□□□ -0.29
PSEN1-224ENST00000559361 CNTFRP26992 372 aa13.23□□□□□ -0.29
PSEN1-224ENST00000559361 TMEM268Q5VZI3 342 aa13.23□□□□□ -0.29
PSEN1-224ENST00000559361 OR4A47Q6IF82 309 aa13.23□□□□□ -0.29
PSEN1-224ENST00000559361 H2BFWTQ7Z2G1 175 aa13.23□□□□□ -0.29
PSEN1-224ENST00000559361 TMEM167AQ8TBQ9 72 aa13.23□□□□□ -0.29
PSEN1-224ENST00000559361 MITD1Q8WV92 249 aa13.23□□□□□ -0.29
PSEN1-224ENST00000559361 LSM10Q969L4 123 aaKnown RBP13.23□□□□□ -0.29
PSEN1-224ENST00000559361 PHB2Q99623 299 aa13.23□□□□□ -0.29
PSEN1-224ENST00000559361 CITED2Q99967 270 aaPredicted RBP13.23□□□□□ -0.29
PSEN1-224ENST00000559361 FBXL15Q9H469 300 aa13.23□□□□□ -0.29
PSEN1-224ENST00000559361 TMEM140Q9NV12 185 aa13.23□□□□□ -0.29
PSEN1-224ENST00000559361 ZNF580Q9UK33 172 aa13.23□□□□□ -0.29
PSEN1-224ENST00000559361 STAB2Q8WWQ8 2551 aa13.23□□□□□ -0.29
PSEN1-224ENST00000559361 SNRPGP15A8MWD9 76 aa13.22□□□□□ -0.29
PSEN1-224ENST00000559361 IGKV1-39P01597 117 aa13.22□□□□□ -0.29
PSEN1-224ENST00000559361 IGKV1D-39P04432 117 aa13.22□□□□□ -0.29
PSEN1-224ENST00000559361 IL6RP08887 468 aaPredicted RBP13.22□□□□□ -0.29
PSEN1-224ENST00000559361 IGLL1P15814 213 aa13.22□□□□□ -0.29
PSEN1-224ENST00000559361 VDAC1P21796 283 aa13.22□□□□□ -0.29
PSEN1-224ENST00000559361 G6PCP35575 357 aa13.22□□□□□ -0.29
PSEN1-224ENST00000559361 OXA1LQ15070 435 aa13.22□□□□□ -0.29
PSEN1-224ENST00000559361 PRSS8Q16651 343 aa13.22□□□□□ -0.29
PSEN1-224ENST00000559361 ZNF562Q6V9R5 426 aa13.22□□□□□ -0.29
PSEN1-224ENST00000559361 SELENOHQ8IZQ5 122 aaKnown RBP13.22□□□□□ -0.29
PSEN1-224ENST00000559361 RNASE11Q8TAA1 199 aaKnown RBP13.22□□□□□ -0.29
PSEN1-224ENST00000559361 ZNF431Q8TF32 576 aaPredicted RBP13.22□□□□□ -0.29
PSEN1-224ENST00000559361 CASTOR1Q8WTX7 329 aa13.22□□□□□ -0.29
PSEN1-224ENST00000559361 WNT10AQ9GZT5 417 aa13.22□□□□□ -0.29
PSEN1-224ENST00000559361 FKBP11Q9NYL4 201 aa13.22□□□□□ -0.29
PSEN1-224ENST00000559361 TMED3Q9Y3Q3 217 aa13.22□□□□□ -0.29
PSEN1-224ENST00000559361 SNAPC5O75971 98 aa13.21□□□□□ -0.29
PSEN1-224ENST00000559361 IGHG2P01859 326 aa13.21□□□□□ -0.29
PSEN1-224ENST00000559361 RPL8P62917 257 aaKnown RBP13.21□□□□□ -0.29
PSEN1-224ENST00000559361 SSX9Q7RTT3 188 aa13.21□□□□□ -0.29
PSEN1-224ENST00000559361 VKORC1L1Q8N0U8 176 aa13.21□□□□□ -0.29
PSEN1-224ENST00000559361 CHPT1Q8WUD6 406 aa13.21□□□□□ -0.29
PSEN1-224ENST00000559361 PRNDQ9UKY0 176 aa13.21□□□□□ -0.29
PSEN1-224ENST00000559361 WI2-2373I1.2A0A1W2PRP0 233 aa13.2□□□□□ -0.3
PSEN1-224ENST00000559361 UPK2O00526 184 aa13.2□□□□□ -0.3
PSEN1-224ENST00000559361 P0C879 139 aa13.2□□□□□ -0.3
PSEN1-224ENST00000559361 BLCAPP62952 87 aa13.2□□□□□ -0.3
PSEN1-224ENST00000559361 THOC7Q6I9Y2 204 aaKnown RBP13.2□□□□□ -0.3
PSEN1-224ENST00000559361 SLC35E3Q7Z769 313 aa13.2□□□□□ -0.3
PSEN1-224ENST00000559361 FOXRED2Q8IWF2 684 aa13.2□□□□□ -0.3
PSEN1-224ENST00000559361 SLC35G3Q8N808 338 aa13.2□□□□□ -0.3
PSEN1-224ENST00000559361 LHFPL5Q8TAF8 219 aa13.2□□□□□ -0.3
PSEN1-224ENST00000559361 GON7Q9BXV9 100 aa13.2□□□□□ -0.3
PSEN1-224ENST00000559361 ZNF430Q9H8G1 570 aaPredicted RBP13.2□□□□□ -0.3
PSEN1-224ENST00000559361 COA4Q9NYJ1 87 aa13.2□□□□□ -0.3
PSEN1-224ENST00000559361 DYNC2H1Q8NCM8 4307 aaKnown RBP13.2□□□□□ -0.3
PSEN1-224ENST00000559361 IGHV7-81A0A0B4J1V7 117 aa13.19□□□□□ -0.3
PSEN1-224ENST00000559361 AP4M1O00189 453 aa13.19□□□□□ -0.3
PSEN1-224ENST00000559361 CA2P00918 260 aa13.19□□□□□ -0.3
PSEN1-224ENST00000559361 IGKV1-5P01602 117 aa13.19□□□□□ -0.3
PSEN1-224ENST00000559361 SLC25A6P12236 298 aa13.19□□□□□ -0.3
PSEN1-224ENST00000559361 HLA-GP17693 338 aa13.19□□□□□ -0.3
PSEN1-224ENST00000559361 CD33P20138 364 aa13.19□□□□□ -0.3
PSEN1-224ENST00000559361 KRTAP10-11P60412 298 aa13.19□□□□□ -0.3
PSEN1-224ENST00000559361 ANKRD55Q3KP44 614 aa13.19□□□□□ -0.3
PSEN1-224ENST00000559361 ZNF429Q86V71 674 aa13.19□□□□□ -0.3
PSEN1-224ENST00000559361 OR5B3Q8NH48 314 aa13.19□□□□□ -0.3
PSEN1-224ENST00000559361 TMEM68Q96MH6 324 aa13.19□□□□□ -0.3
PSEN1-224ENST00000559361 SPIN2AQ99865 258 aa13.19□□□□□ -0.3
PSEN1-224ENST00000559361 SPIN2BQ9BPZ2 258 aa13.19□□□□□ -0.3
PSEN1-224ENST00000559361 COMMD5Q9GZQ3 224 aa13.19□□□□□ -0.3
PSEN1-224ENST00000559361 OR51J1Q9H342 316 aa13.19□□□□□ -0.3
PSEN1-224ENST00000559361 TPSG1Q9NRR2 321 aa13.19□□□□□ -0.3
PSEN1-224ENST00000559361 ZNF257Q9Y2Q1 563 aa13.19□□□□□ -0.3
PSEN1-224ENST00000559361 C15orf61A6NNL5 157 aa13.18□□□□□ -0.3
PSEN1-224ENST00000559361 CNIH1O95406 144 aa13.18□□□□□ -0.3
PSEN1-224ENST00000559361 IFNA21P01568 189 aa13.18□□□□□ -0.3
PSEN1-224ENST00000559361 IGF1P05019 195 aa13.18□□□□□ -0.3
PSEN1-224ENST00000559361 CRIP2P52943 208 aaPredicted RBP13.18□□□□□ -0.3
PSEN1-224ENST00000559361 CX3CL1P78423 397 aa13.18□□□□□ -0.3
PSEN1-224ENST00000559361 CD83Q01151 205 aa13.18□□□□□ -0.3
PSEN1-224ENST00000559361 ARSJQ5FYB0 599 aaPredicted RBP13.18□□□□□ -0.3
PSEN1-224ENST00000559361 NMSQ5H8A3 153 aa13.18□□□□□ -0.3
PSEN1-224ENST00000559361 DEFB121Q5J5C9 76 aa13.18□□□□□ -0.3
PSEN1-224ENST00000559361 C9orf152Q5JTZ5 239 aa13.18□□□□□ -0.3
PSEN1-224ENST00000559361 OR4A16Q8NH70 328 aa13.18□□□□□ -0.3
PSEN1-224ENST00000559361 ARPC1AQ92747 370 aa13.18□□□□□ -0.3
PSEN1-224ENST00000559361 RBMXL1Q96E39 390 aaKnown RBP13.18□□□□□ -0.3
PSEN1-224ENST00000559361 SRSF8Q9BRL6 282 aaKnown RBP13.18□□□□□ -0.3
PSEN1-224ENST00000559361 TMEM14BQ9NUH8 114 aa13.18□□□□□ -0.3
PSEN1-224ENST00000559361 FOXA2Q9Y261 457 aaPredicted RBP13.18□□□□□ -0.3
PSEN1-224ENST00000559361 A0A1B0GU03 582 aa13.17□□□□□ -0.3
PSEN1-224ENST00000559361 C7orf66A4D0T2 115 aa13.17□□□□□ -0.3
PSEN1-224ENST00000559361 SPNP16150 400 aa13.17□□□□□ -0.3
PSEN1-224ENST00000559361 VDAC2P45880 294 aaPredicted RBP13.17□□□□□ -0.3
PSEN1-224ENST00000559361 TMEM267Q0VDI3 215 aaPredicted RBP13.17□□□□□ -0.3
PSEN1-224ENST00000559361 FXYD3Q14802 87 aa13.17□□□□□ -0.3
PSEN1-224ENST00000559361 TNXAQ16473 311 aa13.17□□□□□ -0.3
PSEN1-224ENST00000559361 TATDN3Q17R31 274 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms