RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 TMED3Q9Y3Q3 217 aa11.67□□□□□ -0.54
SNRPA1-207ENST00000559309 KCNAB3O43448 404 aa11.66□□□□□ -0.54
SNRPA1-207ENST00000559309 DHFRP00374 187 aa11.66□□□□□ -0.54
SNRPA1-207ENST00000559309 RAB25P57735 213 aa11.66□□□□□ -0.54
SNRPA1-207ENST00000559309 RPL8P62917 257 aaKnown RBP11.66□□□□□ -0.54
SNRPA1-207ENST00000559309 KLK9Q2XQG4 91 aa11.66□□□□□ -0.54
SNRPA1-207ENST00000559309 ASPHD1Q5U4P2 390 aa11.66□□□□□ -0.54
SNRPA1-207ENST00000559309 ZNF695Q8IW36 515 aa11.66□□□□□ -0.54
SNRPA1-207ENST00000559309 DMBX1Q8NFW5 382 aa11.66□□□□□ -0.54
SNRPA1-207ENST00000559309 GPR146Q96CH1 333 aa11.66□□□□□ -0.54
SNRPA1-207ENST00000559309 KLK9Q9UKQ9 250 aa11.66□□□□□ -0.54
SNRPA1-207ENST00000559309 TEX22C9J3V5 150 aa11.65□□□□□ -0.54
SNRPA1-207ENST00000559309 INS-IGF2F8WCM5 200 aa11.65□□□□□ -0.54
SNRPA1-207ENST00000559309 CREBL2O60519 120 aaPredicted RBP11.65□□□□□ -0.54
SNRPA1-207ENST00000559309 PPIFP30405 207 aaKnown RBP11.65□□□□□ -0.54
SNRPA1-207ENST00000559309 PROK1P58294 105 aa11.65□□□□□ -0.54
SNRPA1-207ENST00000559309 OR2B8PP59922 312 aa11.65□□□□□ -0.54
SNRPA1-207ENST00000559309 ERVK-16P61578 105 aa11.65□□□□□ -0.54
SNRPA1-207ENST00000559309 TATDN3Q17R31 274 aa11.65□□□□□ -0.54
SNRPA1-207ENST00000559309 H2BFWTQ7Z2G1 175 aa11.65□□□□□ -0.54
SNRPA1-207ENST00000559309 SGMS2Q8NHU3 365 aa11.65□□□□□ -0.54
SNRPA1-207ENST00000559309 COQ8AQ8NI60 647 aa11.65□□□□□ -0.54
SNRPA1-207ENST00000559309 CASTOR1Q8WTX7 329 aa11.65□□□□□ -0.54
SNRPA1-207ENST00000559309 NDUFA4L2Q9NRX3 87 aa11.65□□□□□ -0.54
SNRPA1-207ENST00000559309 ZNF257Q9Y2Q1 563 aa11.65□□□□□ -0.54
SNRPA1-207ENST00000559309 TEX50A0A1B0GTY4 177 aa11.64□□□□□ -0.55
SNRPA1-207ENST00000559309 A0A1B0GU03 582 aa11.64□□□□□ -0.55
SNRPA1-207ENST00000559309 ATP6V0E1O15342 81 aa11.64□□□□□ -0.55
SNRPA1-207ENST00000559309 BRI3O95415 125 aa11.64□□□□□ -0.55
SNRPA1-207ENST00000559309 IZUMO4Q1ZYL8 232 aa11.64□□□□□ -0.55
SNRPA1-207ENST00000559309 AKIRIN2Q53H80 203 aa11.64□□□□□ -0.55
SNRPA1-207ENST00000559309 GGNBP1Q5YKI7 109 aa11.64□□□□□ -0.55
SNRPA1-207ENST00000559309 SLC35E3Q7Z769 313 aa11.64□□□□□ -0.55
SNRPA1-207ENST00000559309 C12orf45Q8N5I9 185 aaPredicted RBP11.64□□□□□ -0.55
SNRPA1-207ENST00000559309 OR5B3Q8NH48 314 aa11.64□□□□□ -0.55
SNRPA1-207ENST00000559309 OR52E5Q8NH55 327 aa11.64□□□□□ -0.55
SNRPA1-207ENST00000559309 SRSF12Q8WXF0 261 aaKnown RBP11.64□□□□□ -0.55
SNRPA1-207ENST00000559309 PHB2Q99623 299 aa11.64□□□□□ -0.55
SNRPA1-207ENST00000559309 SRSF8Q9BRL6 282 aaKnown RBP11.64□□□□□ -0.55
SNRPA1-207ENST00000559309 PRNDQ9UKY0 176 aa11.64□□□□□ -0.55
SNRPA1-207ENST00000559309 A0A1B0GUS0 222 aa11.63□□□□□ -0.55
SNRPA1-207ENST00000559309 AP4M1O00189 453 aa11.63□□□□□ -0.55
SNRPA1-207ENST00000559309 ADAP1O75689 374 aa11.63□□□□□ -0.55
SNRPA1-207ENST00000559309 CRYBA1P05813 215 aa11.63□□□□□ -0.55
SNRPA1-207ENST00000559309 MYOD1P15172 320 aa11.63□□□□□ -0.55
SNRPA1-207ENST00000559309 AKR1C2P52895 323 aa11.63□□□□□ -0.55
SNRPA1-207ENST00000559309 IL15RAQ13261 267 aa11.63□□□□□ -0.55
SNRPA1-207ENST00000559309 FXYD3Q14802 87 aa11.63□□□□□ -0.55
SNRPA1-207ENST00000559309 PLGLAQ15195 96 aa11.63□□□□□ -0.55
SNRPA1-207ENST00000559309 C2orf68Q2NKX9 166 aa11.63□□□□□ -0.55
SNRPA1-207ENST00000559309 TMEM95Q3KNT9 176 aa11.63□□□□□ -0.55
SNRPA1-207ENST00000559309 C10orf55Q5SWW7 151 aa11.63□□□□□ -0.55
SNRPA1-207ENST00000559309 STPG2Q8N412 459 aa11.63□□□□□ -0.55
SNRPA1-207ENST00000559309 OR4F5Q8NH21 305 aa11.63□□□□□ -0.55
SNRPA1-207ENST00000559309 ARPC1AQ92747 370 aa11.63□□□□□ -0.55
SNRPA1-207ENST00000559309 RRNAD1Q96FB5 475 aaKnown RBP11.63□□□□□ -0.55
SNRPA1-207ENST00000559309 CLCC1Q96S66 551 aa11.63□□□□□ -0.55
SNRPA1-207ENST00000559309 GPN1Q9HCN4 374 aaPredicted RBP11.63□□□□□ -0.55
SNRPA1-207ENST00000559309 NSG2Q9Y328 171 aa11.63□□□□□ -0.55
SNRPA1-207ENST00000559309 TENM1Q9UKZ4 2725 aa11.63□□□□□ -0.55
SNRPA1-207ENST00000559309 IGLC7A0M8Q6 106 aa11.62□□□□□ -0.55
SNRPA1-207ENST00000559309 CLPSL1A2RUU4 121 aa11.62□□□□□ -0.55
SNRPA1-207ENST00000559309 MPTX1A8MV57 137 aa11.62□□□□□ -0.55
SNRPA1-207ENST00000559309 IGLV1-40P01703 118 aa11.62□□□□□ -0.55
SNRPA1-207ENST00000559309 HSPE1P61604 102 aaKnown RBP11.62□□□□□ -0.55
SNRPA1-207ENST00000559309 TNXAQ16473 311 aa11.62□□□□□ -0.55
SNRPA1-207ENST00000559309 THOC7Q6I9Y2 204 aaKnown RBP11.62□□□□□ -0.55
SNRPA1-207ENST00000559309 RNF152Q8N8N0 203 aa11.62□□□□□ -0.55
SNRPA1-207ENST00000559309 OR2T6Q8NHC8 308 aa11.62□□□□□ -0.55
SNRPA1-207ENST00000559309 TMEM68Q96MH6 324 aa11.62□□□□□ -0.55
SNRPA1-207ENST00000559309 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.62□□□□□ -0.55
SNRPA1-207ENST00000559309 FKBP11Q9NYL4 201 aa11.62□□□□□ -0.55
SNRPA1-207ENST00000559309 HSPB7Q9UBY9 170 aa11.62□□□□□ -0.55
SNRPA1-207ENST00000559309 CACNG5Q9UF02 275 aa11.62□□□□□ -0.55
SNRPA1-207ENST00000559309 ALG5Q9Y673 324 aa11.62□□□□□ -0.55
SNRPA1-207ENST00000559309 ST8SIA3O43173 380 aa11.61□□□□□ -0.55
SNRPA1-207ENST00000559309 SOX15O60248 233 aa11.61□□□□□ -0.55
SNRPA1-207ENST00000559309 SNAPC5O75971 98 aa11.61□□□□□ -0.55
SNRPA1-207ENST00000559309 CRYGCP07315 174 aa11.61□□□□□ -0.55
SNRPA1-207ENST00000559309 SULT1A3P0DMM9 295 aa11.61□□□□□ -0.55
SNRPA1-207ENST00000559309 SULT1A4P0DMN0 295 aa11.61□□□□□ -0.55
SNRPA1-207ENST00000559309 MDKP21741 143 aaPredicted RBP11.61□□□□□ -0.55
SNRPA1-207ENST00000559309 VDAC2P45880 294 aaPredicted RBP11.61□□□□□ -0.55
SNRPA1-207ENST00000559309 RPL27AP46776 148 aaKnown RBP11.61□□□□□ -0.55
SNRPA1-207ENST00000559309 PRCDQ00LT1 54 aa11.61□□□□□ -0.55
SNRPA1-207ENST00000559309 SMCO1Q147U7 214 aa11.61□□□□□ -0.55
SNRPA1-207ENST00000559309 PVRIGQ6DKI7 326 aa11.61□□□□□ -0.55
SNRPA1-207ENST00000559309 Q6ZNX1 250 aa11.61□□□□□ -0.55
SNRPA1-207ENST00000559309 OR4D5Q8NGN0 318 aa11.61□□□□□ -0.55
SNRPA1-207ENST00000559309 OR10C1Q96KK4 312 aa11.61□□□□□ -0.55
SNRPA1-207ENST00000559309 NOL4LQ96MY1 436 aaPredicted RBP11.61□□□□□ -0.55
SNRPA1-207ENST00000559309 QTRT1Q9BXR0 403 aaKnown RBP11.61□□□□□ -0.55
SNRPA1-207ENST00000559309 OR51B2Q9Y5P1 312 aa11.61□□□□□ -0.55
SNRPA1-207ENST00000559309 MSGN1A6NI15 193 aa11.6□□□□□ -0.55
SNRPA1-207ENST00000559309 FAM90A26D6RGX4 464 aa11.6□□□□□ -0.55
SNRPA1-207ENST00000559309 IGHG4P01861 327 aa11.6□□□□□ -0.55
SNRPA1-207ENST00000559309 HOXB5P09067 269 aa11.6□□□□□ -0.55
SNRPA1-207ENST00000559309 ID3Q02535 119 aa11.6□□□□□ -0.55
SNRPA1-207ENST00000559309 SRSF4Q08170 494 aaKnown RBP11.6□□□□□ -0.55
SNRPA1-207ENST00000559309 FOXL1Q12952 345 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms