RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 ZNF83P51522 516 aa6.03□□□□□ -1.44
USP3-210ENST00000559192 IBA57Q5T440 356 aaKnown RBP6.03□□□□□ -1.44
USP3-210ENST00000559192 MMD2Q8IY49 270 aa6.03□□□□□ -1.44
USP3-210ENST00000559192 ABHD12Q8N2K0 398 aa6.03□□□□□ -1.44
USP3-210ENST00000559192 LRTM2Q8N967 370 aa6.03□□□□□ -1.44
USP3-210ENST00000559192 NFAM1Q8NET5 270 aaPredicted RBP6.03□□□□□ -1.44
USP3-210ENST00000559192 OR5P3Q8WZ94 311 aa6.03□□□□□ -1.44
USP3-210ENST00000559192 PRDM14Q9GZV8 571 aa6.03□□□□□ -1.44
USP3-210ENST00000559192 GTSF1LQ9H1H1 148 aa6.03□□□□□ -1.44
USP3-210ENST00000559192 CHODLQ9H9P2 273 aa6.03□□□□□ -1.44
USP3-210ENST00000559192 PROCRQ9UNN8 238 aa6.03□□□□□ -1.44
USP3-210ENST00000559192 TMEM250H0YL14 139 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 TGFAP01135 160 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 LINC00271P0C7V0 271 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 CRYBB3P26998 211 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 GAGE2BQ13066 116 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 SSPNQ14714 243 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 GAGE2EQ4V326 116 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 ZBTB34Q8NCN2 500 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 SMRP1Q8NCR6 262 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 LEAP2Q969E1 77 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 HSPB7Q9UBY9 170 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 GAGE2DQ9UEU5 116 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 CYSLTR1Q9Y271 337 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 ODAMA1E959 279 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 RAMP3O60896 148 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 SERF1AO75920 110 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 AMY1AP04745 511 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 GCSAMLQ5JQS6 135 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 TPTE2P1Q5T6R2 138 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 TNFRSF14Q92956 283 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 WDR54Q9H977 334 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 IL36GQ9NZH8 169 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 OR51B2Q9Y5P1 312 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 COX11Q9Y6N1 276 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 A0A1W2PR77 199 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 TFF1P04155 84 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 SSTR5P35346 364 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 ID3Q02535 119 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 SLC25A53Q5H9E4 307 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 SAXO1Q8IYX7 474 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 TTC9CQ8N5M4 171 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 FADS6Q8N9I5 356 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 TBL2Q9Y4P3 447 aaKnown RBP6.02□□□□□ -1.45
USP3-210ENST00000559192 HILPDAQ9Y5L2 63 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 KIAA0100Q14667 2235 aaKnown RBP6.02□□□□□ -1.45
USP3-210ENST00000559192 C17orf98A8MV24 154 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 TMEM262E9PQX1 116 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 CLDN14O95500 239 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 DNAL4O96015 105 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 GZMBP10144 247 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 KIR2DL2P43627 348 aaPredicted RBP6.02□□□□□ -1.45
USP3-210ENST00000559192 GBGT1Q8N5D6 347 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 NABP1Q96AH0 204 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 SSBP3Q9BWW4 388 aaPredicted RBP6.02□□□□□ -1.45
USP3-210ENST00000559192 TTTY12Q9BZ98 90 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 LIME1Q9H400 295 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 A0A1W2PQM1 296 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 PATE3B3GLJ2 98 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 WNT9BO14905 357 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 VENTXO95231 258 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 LYZP61626 148 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 MRPS11P82912 194 aaKnown RBP6.02□□□□□ -1.45
USP3-210ENST00000559192 ZNF766Q5HY98 468 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 SSBP4Q9BWG4 385 aaPredicted RBP6.02□□□□□ -1.45
USP3-210ENST00000559192 PLA2G2EQ9NZK7 142 aa6.02□□□□□ -1.45
USP3-210ENST00000559192 IGHV3-21A0A0B4J1V1 117 aa6.01□□□□□ -1.45
USP3-210ENST00000559192 A8MWL6 223 aa6.01□□□□□ -1.45
USP3-210ENST00000559192 FAM90A26D6RGX4 464 aa6.01□□□□□ -1.45
USP3-210ENST00000559192 PPIAL4DF5H284 164 aa6.01□□□□□ -1.45
USP3-210ENST00000559192 LGALS3P17931 250 aaKnown RBP6.01□□□□□ -1.45
USP3-210ENST00000559192 FAM19A2Q8N3H0 131 aa6.01□□□□□ -1.45
USP3-210ENST00000559192 RND1Q92730 232 aa6.01□□□□□ -1.45
USP3-210ENST00000559192 NPVFQ9HCQ7 196 aa6.01□□□□□ -1.45
USP3-210ENST00000559192 KIF26BQ2KJY2 2108 aa6.01□□□□□ -1.45
USP3-210ENST00000559192 TNFSF15O95150 251 aa6.01□□□□□ -1.45
USP3-210ENST00000559192 PLAUP00749 431 aa6.01□□□□□ -1.45
USP3-210ENST00000559192 VMA21Q3ZAQ7 101 aa6.01□□□□□ -1.45
USP3-210ENST00000559192 MOGAT3Q86VF5 341 aa6.01□□□□□ -1.45
USP3-210ENST00000559192 PLPPR1Q8TBJ4 325 aa6.01□□□□□ -1.45
USP3-210ENST00000559192 KCNS1Q96KK3 526 aa6.01□□□□□ -1.45
USP3-210ENST00000559192 C1orf147Q96MC9 270 aaPredicted RBP6.01□□□□□ -1.45
USP3-210ENST00000559192 ZNF257Q9Y2Q1 563 aa6.01□□□□□ -1.45
USP3-210ENST00000559192 APOMO95445 188 aa6.01□□□□□ -1.45
USP3-210ENST00000559192 CEACAM1P13688 526 aa6.01□□□□□ -1.45
USP3-210ENST00000559192 LCN2P80188 198 aa6.01□□□□□ -1.45
USP3-210ENST00000559192 CENPWQ5EE01 88 aa6.01□□□□□ -1.45
USP3-210ENST00000559192 LINC00470Q9BZP3 86 aa6.01□□□□□ -1.45
USP3-210ENST00000559192 THYN1Q9P016 225 aa6.01□□□□□ -1.45
USP3-210ENST00000559192 TRBV24-1A0A075B6N3 115 aa6.01□□□□□ -1.45
USP3-210ENST00000559192 TRAV8-6A0A0B4J262 113 aa6.01□□□□□ -1.45
USP3-210ENST00000559192 A0A0G2JRQ6 117 aa6.01□□□□□ -1.45
USP3-210ENST00000559192 CD33P20138 364 aa6.01□□□□□ -1.45
USP3-210ENST00000559192 GCHFRP30047 84 aa6.01□□□□□ -1.45
USP3-210ENST00000559192 MAS1LP35410 378 aa6.01□□□□□ -1.45
USP3-210ENST00000559192 C10orf113Q5VZT2 155 aa6.01□□□□□ -1.45
USP3-210ENST00000559192 FAM90A2PQ658T7 463 aa6.01□□□□□ -1.45
USP3-210ENST00000559192 TMEM256Q8N2U0 113 aa6.01□□□□□ -1.45
USP3-210ENST00000559192 STPG3Q8N7X2 389 aa6.01□□□□□ -1.45
USP3-210ENST00000559192 NEUROG1Q92886 237 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms