RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 C8orf86Q6ZUL3 223 aa8.88□□□□□ -0.99
SNX1-204ENST00000559061 COMMD1Q8N668 190 aa8.88□□□□□ -0.99
SNX1-204ENST00000559061 ZNF491Q8N8L2 437 aa8.88□□□□□ -0.99
SNX1-204ENST00000559061 OR4A5Q8NH83 315 aa8.88□□□□□ -0.99
SNX1-204ENST00000559061 ABHD5Q8WTS1 349 aa8.88□□□□□ -0.99
SNX1-204ENST00000559061 DEDD2Q8WXF8 326 aa8.88□□□□□ -0.99
SNX1-204ENST00000559061 M0QZ24 198 aa8.87□□□□□ -0.99
SNX1-204ENST00000559061 CNIH1O95406 144 aa8.87□□□□□ -0.99
SNX1-204ENST00000559061 PRH1P02810 166 aa8.87□□□□□ -0.99
SNX1-204ENST00000559061 FGF2P09038 288 aa8.87□□□□□ -0.99
SNX1-204ENST00000559061 RAB9AP51151 201 aa8.87□□□□□ -0.99
SNX1-204ENST00000559061 AP3S2P59780 193 aa8.87□□□□□ -0.99
SNX1-204ENST00000559061 DHODHQ02127 395 aa8.87□□□□□ -0.99
SNX1-204ENST00000559061 TMEM187Q14656 261 aa8.87□□□□□ -0.99
SNX1-204ENST00000559061 TRIQKQ629K1 86 aa8.87□□□□□ -0.99
SNX1-204ENST00000559061 Q6ZRM9 215 aa8.87□□□□□ -0.99
SNX1-204ENST00000559061 POC5Q8NA72 575 aa8.87□□□□□ -0.99
SNX1-204ENST00000559061 DMBX1Q8NFW5 382 aa8.87□□□□□ -0.99
SNX1-204ENST00000559061 OR5T1Q8NG75 326 aa8.87□□□□□ -0.99
SNX1-204ENST00000559061 VSTM2AQ8TAG5 236 aa8.87□□□□□ -0.99
SNX1-204ENST00000559061 FAM110DQ8TAY7 271 aaPredicted RBP8.87□□□□□ -0.99
SNX1-204ENST00000559061 GALNT14Q96FL9 552 aa8.87□□□□□ -0.99
SNX1-204ENST00000559061 RAX2Q96IS3 184 aa8.87□□□□□ -0.99
SNX1-204ENST00000559061 DUX3Q96PT4 197 aa8.87□□□□□ -0.99
SNX1-204ENST00000559061 TMEM222Q9H0R3 208 aa8.87□□□□□ -0.99
SNX1-204ENST00000559061 ALX4Q9H161 411 aaPredicted RBP8.87□□□□□ -0.99
SNX1-204ENST00000559061 COPZ2Q9P299 210 aa8.87□□□□□ -0.99
SNX1-204ENST00000559061 SCP2D1Q9UJQ7 156 aa8.87□□□□□ -0.99
SNX1-204ENST00000559061 FLVCR2Q9UPI3 526 aa8.87□□□□□ -0.99
SNX1-204ENST00000559061 MGAM2Q2M2H8 2515 aa8.86□□□□□ -0.99
SNX1-204ENST00000559061 A0A0B4J293 547 aa8.86□□□□□ -0.99
SNX1-204ENST00000559061 TEX13DA0A0J9YY54 714 aaPredicted RBP8.86□□□□□ -0.99
SNX1-204ENST00000559061 TEX50A0A1B0GTY4 177 aa8.86□□□□□ -0.99
SNX1-204ENST00000559061 C15orf61A6NNL5 157 aa8.86□□□□□ -0.99
SNX1-204ENST00000559061 I3L521 148 aa8.86□□□□□ -0.99
SNX1-204ENST00000559061 NDUFB6O95139 128 aa8.86□□□□□ -0.99
SNX1-204ENST00000559061 BRI3O95415 125 aa8.86□□□□□ -0.99
SNX1-204ENST00000559061 CDS2O95674 445 aa8.86□□□□□ -0.99
SNX1-204ENST00000559061 PF4V1P10720 104 aa8.86□□□□□ -0.99
SNX1-204ENST00000559061 MAS1LP35410 378 aa8.86□□□□□ -0.99
SNX1-204ENST00000559061 FAUP35544 74 aaKnown RBP8.86□□□□□ -0.99
SNX1-204ENST00000559061 RPL27AP46776 148 aaKnown RBP8.86□□□□□ -0.99
SNX1-204ENST00000559061 CDX1P47902 265 aaPredicted RBP8.86□□□□□ -0.99
SNX1-204ENST00000559061 KLK9Q2XQG4 91 aa8.86□□□□□ -0.99
SNX1-204ENST00000559061 CXorf66Q5JRM2 361 aaPredicted RBP8.86□□□□□ -0.99
SNX1-204ENST00000559061 KHDC1LQ5JSQ8 128 aa8.86□□□□□ -0.99
SNX1-204ENST00000559061 TREML4Q6UXN2 200 aa8.86□□□□□ -0.99
SNX1-204ENST00000559061 SELENOHQ8IZQ5 122 aaKnown RBP8.86□□□□□ -0.99
SNX1-204ENST00000559061 TTC9CQ8N5M4 171 aa8.86□□□□□ -0.99
SNX1-204ENST00000559061 CCDC71LQ8N9Z2 235 aa8.86□□□□□ -0.99
SNX1-204ENST00000559061 KLHL30-AS1Q8NEE0 82 aa8.86□□□□□ -0.99
SNX1-204ENST00000559061 OR10W1Q8NGF6 305 aa8.86□□□□□ -0.99
SNX1-204ENST00000559061 OR5M8Q8NGP6 311 aa8.86□□□□□ -0.99
SNX1-204ENST00000559061 MS4A10Q96PG2 267 aa8.86□□□□□ -0.99
SNX1-204ENST00000559061 FANCD2OSQ96PS1 177 aa8.86□□□□□ -0.99
SNX1-204ENST00000559061 P2RX4Q99571 388 aa8.86□□□□□ -0.99
SNX1-204ENST00000559061 CCDC32Q9BV29 185 aa8.86□□□□□ -0.99
SNX1-204ENST00000559061 GON7Q9BXV9 100 aa8.86□□□□□ -0.99
SNX1-204ENST00000559061 TMEM14BQ9NUH8 114 aa8.86□□□□□ -0.99
SNX1-204ENST00000559061 KLK9Q9UKQ9 250 aa8.86□□□□□ -0.99
SNX1-204ENST00000559061 C14orf166Q9Y224 244 aaKnown RBP8.86□□□□□ -0.99
SNX1-204ENST00000559061 FBN3Q75N90 2809 aa8.85□□□□□ -0.99
SNX1-204ENST00000559061 TRBV9A0A0B4J1U6 114 aa8.85□□□□□ -0.99
SNX1-204ENST00000559061 REG1AP05451 166 aa8.85□□□□□ -0.99
SNX1-204ENST00000559061 CRYGCP07315 174 aa8.85□□□□□ -0.99
SNX1-204ENST00000559061 CTRB1P17538 263 aa8.85□□□□□ -0.99
SNX1-204ENST00000559061 MFAP2P55001 183 aa8.85□□□□□ -0.99
SNX1-204ENST00000559061 WT1-ASQ06250 92 aa8.85□□□□□ -0.99
SNX1-204ENST00000559061 FHL3Q13643 280 aa8.85□□□□□ -0.99
SNX1-204ENST00000559061 ANKRD55Q3KP44 614 aa8.85□□□□□ -0.99
SNX1-204ENST00000559061 CTRB2Q6GPI1 263 aa8.85□□□□□ -0.99
SNX1-204ENST00000559061 C11orf87Q6NUJ2 197 aa8.85□□□□□ -0.99
SNX1-204ENST00000559061 ZNF695Q8IW36 515 aa8.85□□□□□ -0.99
SNX1-204ENST00000559061 LINC00482Q8N8I6 264 aa8.85□□□□□ -0.99
SNX1-204ENST00000559061 C4orf3Q8WVX3 66 aa8.85□□□□□ -0.99
SNX1-204ENST00000559061 S100ZQ8WXG8 99 aa8.85□□□□□ -0.99
SNX1-204ENST00000559061 TMEM56Q96MV1 263 aa8.85□□□□□ -0.99
SNX1-204ENST00000559061 FYTTD1Q96QD9 318 aaKnown RBP8.85□□□□□ -0.99
SNX1-204ENST00000559061 QTRT1Q9BXR0 403 aaKnown RBP8.85□□□□□ -0.99
SNX1-204ENST00000559061 NDUFA4L2Q9NRX3 87 aa8.85□□□□□ -0.99
SNX1-204ENST00000559061 ZFP57Q9NU63 452 aa8.85□□□□□ -0.99
SNX1-204ENST00000559061 TMEM56-RWDD3S4R434 201 aa8.85□□□□□ -0.99
SNX1-204ENST00000559061 NBEAL1Q6ZS30 2694 aa8.84□□□□□ -0.99
SNX1-204ENST00000559061 NAP1L6A6NFF2 107 aa8.84□□□□□ -0.99
SNX1-204ENST00000559061 NPIPB5A8MRT5 1133 aa8.84□□□□□ -0.99
SNX1-204ENST00000559061 LYRM1O43325 122 aa8.84□□□□□ -0.99
SNX1-204ENST00000559061 CREBL2O60519 120 aaPredicted RBP8.84□□□□□ -0.99
SNX1-204ENST00000559061 UPK1BO75841 260 aa8.84□□□□□ -0.99
SNX1-204ENST00000559061 SERPINE2P07093 398 aa8.84□□□□□ -0.99
SNX1-204ENST00000559061 AKR1C4P17516 323 aa8.84□□□□□ -0.99
SNX1-204ENST00000559061 S100GP29377 79 aa8.84□□□□□ -0.99
SNX1-204ENST00000559061 ERVK-16P61578 105 aa8.84□□□□□ -0.99
SNX1-204ENST00000559061 RUNX1Q01196 453 aa8.84□□□□□ -0.99
SNX1-204ENST00000559061 TMEM267Q0VDI3 215 aaPredicted RBP8.84□□□□□ -0.99
SNX1-204ENST00000559061 PPP1R1AQ13522 171 aa8.84□□□□□ -0.99
SNX1-204ENST00000559061 RBMS2Q15434 407 aaKnown RBP8.84□□□□□ -0.99
SNX1-204ENST00000559061 AARDQ4LEZ3 155 aa8.84□□□□□ -0.99
SNX1-204ENST00000559061 TMED4Q7Z7H5 227 aa8.84□□□□□ -0.99
SNX1-204ENST00000559061 SLC25A42Q86VD7 318 aa8.84□□□□□ -0.99
SNX1-204ENST00000559061 UBE2E2Q96LR5 201 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms