RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 NEURL2Q9BR09 285 aa8.68□□□□□ -1.02
CASC4-205ENST00000558735 SLC5A7Q9GZV3 580 aa8.68□□□□□ -1.02
CASC4-205ENST00000558735 BET1LQ9NYM9 111 aa8.68□□□□□ -1.02
CASC4-205ENST00000558735 FRAS1Q86XX4 4008 aa8.68□□□□□ -1.02
CASC4-205ENST00000558735 RBMY1BA6NDE4 496 aaKnown RBP8.67□□□□□ -1.02
CASC4-205ENST00000558735 RBMY1EA6NEQ0 496 aaKnown RBP8.67□□□□□ -1.02
CASC4-205ENST00000558735 UPK2O00526 184 aa8.67□□□□□ -1.02
CASC4-205ENST00000558735 RBFOX2O43251 390 aaKnown RBP eCLIP8.67□□□□□ -1.02
CASC4-205ENST00000558735 REG1AP05451 166 aa8.67□□□□□ -1.02
CASC4-205ENST00000558735 CLEC3BP05452 202 aa8.67□□□□□ -1.02
CASC4-205ENST00000558735 RBMY1DP0C7P1 496 aaKnown RBP8.67□□□□□ -1.02
CASC4-205ENST00000558735 HLA-GP17693 338 aa8.67□□□□□ -1.02
CASC4-205ENST00000558735 CBLN1P23435 193 aa8.67□□□□□ -1.02
CASC4-205ENST00000558735 TGFBR1P36897 503 aa8.67□□□□□ -1.02
CASC4-205ENST00000558735 OR2B8PP59922 312 aa8.67□□□□□ -1.02
CASC4-205ENST00000558735 CD81P60033 236 aa8.67□□□□□ -1.02
CASC4-205ENST00000558735 POU2AF1Q16633 256 aa8.67□□□□□ -1.02
CASC4-205ENST00000558735 TIMM50Q3ZCQ8 353 aa8.67□□□□□ -1.02
CASC4-205ENST00000558735 DHRS11Q6UWP2 260 aa8.67□□□□□ -1.02
CASC4-205ENST00000558735 ZNF818PQ6ZRF7 136 aa8.67□□□□□ -1.02
CASC4-205ENST00000558735 DEFB125Q8N687 156 aa8.67□□□□□ -1.02
CASC4-205ENST00000558735 OR5AP2Q8NGF4 316 aa8.67□□□□□ -1.02
CASC4-205ENST00000558735 OR4A5Q8NH83 315 aa8.67□□□□□ -1.02
CASC4-205ENST00000558735 AIFM2Q9BRQ8 373 aa8.67□□□□□ -1.02
CASC4-205ENST00000558735 HIPK2Q9H2X6 1198 aa8.67□□□□□ -1.02
CASC4-205ENST00000558735 PLEKHA3Q9HB20 300 aa8.67□□□□□ -1.02
CASC4-205ENST00000558735 SELENOKQ9Y6D0 94 aa8.67□□□□□ -1.02
CASC4-205ENST00000558735 IGLV11-55A0A075B6I3 123 aa8.66□□□□□ -1.02
CASC4-205ENST00000558735 MEIS3P1A6NDR6 274 aa8.66□□□□□ -1.02
CASC4-205ENST00000558735 XRCC3O43542 346 aa8.66□□□□□ -1.02
CASC4-205ENST00000558735 HPRT1P00492 218 aa8.66□□□□□ -1.02
CASC4-205ENST00000558735 IFNA6P05013 189 aa8.66□□□□□ -1.02
CASC4-205ENST00000558735 HIST1H1BP16401 226 aaKnown RBP8.66□□□□□ -1.02
CASC4-205ENST00000558735 GNRHRP30968 328 aa8.66□□□□□ -1.02
CASC4-205ENST00000558735 ARL3P36405 182 aa8.66□□□□□ -1.02
CASC4-205ENST00000558735 RPS19P39019 145 aaKnown RBP8.66□□□□□ -1.02
CASC4-205ENST00000558735 FXYD4P59646 89 aa8.66□□□□□ -1.02
CASC4-205ENST00000558735 GUCA2BQ16661 112 aa8.66□□□□□ -1.02
CASC4-205ENST00000558735 FAM106AQ4KMX7 169 aa8.66□□□□□ -1.02
CASC4-205ENST00000558735 LAX1Q8IWV1 398 aa8.66□□□□□ -1.02
CASC4-205ENST00000558735 DYNLRB2Q8TF09 96 aa8.66□□□□□ -1.02
CASC4-205ENST00000558735 CACNG8Q8WXS5 425 aa8.66□□□□□ -1.02
CASC4-205ENST00000558735 WDR89Q96FK6 387 aaPredicted RBP8.66□□□□□ -1.02
CASC4-205ENST00000558735 HRASLSQ9HDD0 168 aa8.66□□□□□ -1.02
CASC4-205ENST00000558735 ZC4H2Q9NQZ6 224 aa8.66□□□□□ -1.02
CASC4-205ENST00000558735 SLC2A8Q9NY64 477 aa8.66□□□□□ -1.02
CASC4-205ENST00000558735 TECRQ9NZ01 308 aaKnown RBP8.66□□□□□ -1.02
CASC4-205ENST00000558735 CEPT1Q9Y6K0 416 aa8.66□□□□□ -1.02
CASC4-205ENST00000558735 IGLC7A0M8Q6 106 aa8.65□□□□□ -1.02
CASC4-205ENST00000558735 ZNF320A2RRD8 509 aa8.65□□□□□ -1.02
CASC4-205ENST00000558735 TMEM213A2RRL7 107 aa8.65□□□□□ -1.02
CASC4-205ENST00000558735 MFSD2BA6NFX1 497 aa8.65□□□□□ -1.02
CASC4-205ENST00000558735 OR11H12B2RN74 326 aa8.65□□□□□ -1.02
CASC4-205ENST00000558735 TMEM127O75204 238 aa8.65□□□□□ -1.02
CASC4-205ENST00000558735 TPPPO94811 219 aa8.65□□□□□ -1.02
CASC4-205ENST00000558735 DHFRP00374 187 aa8.65□□□□□ -1.02
CASC4-205ENST00000558735 DEFA4P12838 97 aa8.65□□□□□ -1.02
CASC4-205ENST00000558735 NQO2P16083 231 aa8.65□□□□□ -1.02
CASC4-205ENST00000558735 CBX5P45973 191 aa8.65□□□□□ -1.02
CASC4-205ENST00000558735 RFX2P48378 723 aa8.65□□□□□ -1.02
CASC4-205ENST00000558735 TAS2R31P59538 309 aa8.65□□□□□ -1.02
CASC4-205ENST00000558735 TM4SF20Q53R12 229 aa8.65□□□□□ -1.02
CASC4-205ENST00000558735 UXS1Q8NBZ7 420 aa8.65□□□□□ -1.02
CASC4-205ENST00000558735 OR10W1Q8NGF6 305 aa8.65□□□□□ -1.02
CASC4-205ENST00000558735 IL17DQ8TAD2 202 aa8.65□□□□□ -1.02
CASC4-205ENST00000558735 EEF1AKMT3Q96AZ1 226 aa8.65□□□□□ -1.02
CASC4-205ENST00000558735 S100A16Q96FQ6 103 aaKnown RBP8.65□□□□□ -1.02
CASC4-205ENST00000558735 WFDC10AQ9H1F0 79 aa8.65□□□□□ -1.02
CASC4-205ENST00000558735 PLEKHA2Q9HB19 425 aa8.65□□□□□ -1.02
CASC4-205ENST00000558735 RETNQ9HD89 108 aa8.65□□□□□ -1.02
CASC4-205ENST00000558735 MLXQ9UH92 298 aa8.65□□□□□ -1.02
CASC4-205ENST00000558735 TRBV7-1A0A0A6YYK4 115 aa8.64□□□□□ -1.03
CASC4-205ENST00000558735 TEX50A0A1B0GTY4 177 aa8.64□□□□□ -1.03
CASC4-205ENST00000558735 PGLYRP1O75594 196 aaPredicted RBP8.64□□□□□ -1.03
CASC4-205ENST00000558735 S1PR2O95136 353 aa8.64□□□□□ -1.03
CASC4-205ENST00000558735 RPA2P15927 270 aa8.64□□□□□ -1.03
CASC4-205ENST00000558735 CATR1Q13166 79 aa8.64□□□□□ -1.03
CASC4-205ENST00000558735 KCTD21Q4G0X4 260 aa8.64□□□□□ -1.03
CASC4-205ENST00000558735 UNQ9165/PRO28630Q6UXU0 137 aa8.64□□□□□ -1.03
CASC4-205ENST00000558735 TMEM17Q86X19 198 aa8.64□□□□□ -1.03
CASC4-205ENST00000558735 LYSMD2Q8IV50 215 aa8.64□□□□□ -1.03
CASC4-205ENST00000558735 OR51H1Q8NH63 302 aa8.64□□□□□ -1.03
CASC4-205ENST00000558735 ZNF502Q8TBZ5 544 aa8.64□□□□□ -1.03
CASC4-205ENST00000558735 CD300LFQ8TDQ1 290 aa8.64□□□□□ -1.03
CASC4-205ENST00000558735 CXorf58Q96LI9 332 aa8.64□□□□□ -1.03
CASC4-205ENST00000558735 COMMD5Q9GZQ3 224 aa8.64□□□□□ -1.03
CASC4-205ENST00000558735 ANAPC10Q9UM13 185 aa8.64□□□□□ -1.03
CASC4-205ENST00000558735 A8MWP6 167 aa8.63□□□□□ -1.03
CASC4-205ENST00000558735 PMP2P02689 132 aa8.63□□□□□ -1.03
CASC4-205ENST00000558735 C8orf88P0DMB2 117 aa8.63□□□□□ -1.03
CASC4-205ENST00000558735 NAT1P18440 290 aa8.63□□□□□ -1.03
CASC4-205ENST00000558735 PTBP1P26599 531 aaKnown RBP eCLIP8.63□□□□□ -1.03
CASC4-205ENST00000558735 ZNF585BQ52M93 769 aa8.63□□□□□ -1.03
CASC4-205ENST00000558735 AADACL3Q5VUY0 350 aa8.63□□□□□ -1.03
CASC4-205ENST00000558735 ZNF57Q68EA5 555 aaPredicted RBP8.63□□□□□ -1.03
CASC4-205ENST00000558735 CROCCP3Q8IVE0 287 aa8.63□□□□□ -1.03
CASC4-205ENST00000558735 TMEM61Q8N0U2 210 aa8.63□□□□□ -1.03
CASC4-205ENST00000558735 DMBX1Q8NFW5 382 aa8.63□□□□□ -1.03
CASC4-205ENST00000558735 YIPF6Q96EC8 236 aa8.63□□□□□ -1.03
CASC4-205ENST00000558735 FAM110AQ9BQ89 295 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms