RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 TEX50A0A1B0GTY4 177 aa16.39■□□□□ 0.21
SNRPA1-205ENST00000558036 RPS10-NUDT3A0A1W2PQS6 291 aa16.39■□□□□ 0.21
SNRPA1-205ENST00000558036 FBXO24O75426 580 aa16.39■□□□□ 0.21
SNRPA1-205ENST00000558036 JTBO76095 146 aa16.39■□□□□ 0.21
SNRPA1-205ENST00000558036 VDAC2P45880 294 aaPredicted RBP16.39■□□□□ 0.21
SNRPA1-205ENST00000558036 PDLIM3Q53GG5 364 aaPredicted RBP16.39■□□□□ 0.21
SNRPA1-205ENST00000558036 TMEM14EPQ6UXP3 125 aa16.39■□□□□ 0.21
SNRPA1-205ENST00000558036 PIP4P2Q8N4L2 257 aa16.39■□□□□ 0.21
SNRPA1-205ENST00000558036 CIB3Q96Q77 187 aaPredicted RBP16.39■□□□□ 0.21
SNRPA1-205ENST00000558036 ZNF430Q9H8G1 570 aaPredicted RBP16.39■□□□□ 0.21
SNRPA1-205ENST00000558036 STRAPQ9Y3F4 350 aaKnown RBP16.39■□□□□ 0.21
SNRPA1-205ENST00000558036 UNC79Q9P2D8 2635 aa16.39■□□□□ 0.21
SNRPA1-205ENST00000558036 TNCP24821 2201 aa16.39■□□□□ 0.21
SNRPA1-205ENST00000558036 E7EUB6 86 aa16.39■□□□□ 0.21
SNRPA1-205ENST00000558036 IGKV1D-33P01593 117 aa16.39■□□□□ 0.21
SNRPA1-205ENST00000558036 IGKV1-33P01594 117 aa16.39■□□□□ 0.21
SNRPA1-205ENST00000558036 LGALS7P47929 136 aa16.39■□□□□ 0.21
SNRPA1-205ENST00000558036 RPL8P62917 257 aaKnown RBP16.39■□□□□ 0.21
SNRPA1-205ENST00000558036 C10orf55Q5SWW7 151 aa16.39■□□□□ 0.21
SNRPA1-205ENST00000558036 AJUBAQ96IF1 538 aa16.39■□□□□ 0.21
SNRPA1-205ENST00000558036 HIF1ANQ9NWT6 349 aa16.39■□□□□ 0.21
SNRPA1-205ENST00000558036 ZNF469Q96JG9 3925 aaPredicted RBP16.38■□□□□ 0.21
SNRPA1-205ENST00000558036 ITPR2Q14571 2701 aa16.38■□□□□ 0.21
SNRPA1-205ENST00000558036 VMA21Q3ZAQ7 101 aa16.38■□□□□ 0.21
SNRPA1-205ENST00000558036 RUSC1-AS1Q66K80 236 aa16.38■□□□□ 0.21
SNRPA1-205ENST00000558036 UBAC2Q8NBM4 344 aa16.38■□□□□ 0.21
SNRPA1-205ENST00000558036 HSD17B11Q8NBQ5 300 aa16.38■□□□□ 0.21
SNRPA1-205ENST00000558036 OR1S2Q8NGQ3 325 aa16.38■□□□□ 0.21
SNRPA1-205ENST00000558036 VSTM2AQ8TAG5 236 aa16.38■□□□□ 0.21
SNRPA1-205ENST00000558036 TMEM167AQ8TBQ9 72 aa16.38■□□□□ 0.21
SNRPA1-205ENST00000558036 HECTD1Q9ULT8 2610 aa16.38■□□□□ 0.21
SNRPA1-205ENST00000558036 B4DSR2 109 aa16.37■□□□□ 0.21
SNRPA1-205ENST00000558036 PSG5Q15238 335 aa16.37■□□□□ 0.21
SNRPA1-205ENST00000558036 MRGPRG-AS1Q2M3A8 158 aa16.37■□□□□ 0.21
SNRPA1-205ENST00000558036 MINOS1Q5TGZ0 78 aa16.37■□□□□ 0.21
SNRPA1-205ENST00000558036 OR10W1Q8NGF6 305 aa16.37■□□□□ 0.21
SNRPA1-205ENST00000558036 CLCC1Q96S66 551 aa16.37■□□□□ 0.21
SNRPA1-205ENST00000558036 COMMD5Q9GZQ3 224 aa16.37■□□□□ 0.21
SNRPA1-205ENST00000558036 SH3BGRL3Q9H299 93 aa16.37■□□□□ 0.21
SNRPA1-205ENST00000558036 RFNGQ9Y644 331 aa16.37■□□□□ 0.21
SNRPA1-205ENST00000558036 MINOS1-NBL1R4GNA1 71 aa16.37■□□□□ 0.21
SNRPA1-205ENST00000558036 C15orf62A8K5M9 175 aa16.37■□□□□ 0.21
SNRPA1-205ENST00000558036 ATP6V1G1O75348 118 aa16.37■□□□□ 0.21
SNRPA1-205ENST00000558036 IFNA10P01566 189 aa16.37■□□□□ 0.21
SNRPA1-205ENST00000558036 F2RL1P55085 397 aa16.37■□□□□ 0.21
SNRPA1-205ENST00000558036 HES1Q14469 280 aa16.37■□□□□ 0.21
SNRPA1-205ENST00000558036 PHYHIPLQ96FC7 376 aa16.37■□□□□ 0.21
SNRPA1-205ENST00000558036 HIPK2Q9H2X6 1198 aa16.37■□□□□ 0.21
SNRPA1-205ENST00000558036 C7orf69Q9H7B7 122 aa16.37■□□□□ 0.21
SNRPA1-205ENST00000558036 FASNP49327 2511 aaKnown RBP16.37■□□□□ 0.21
SNRPA1-205ENST00000558036 BORCS7-ASMTA0A0B4J1R7 106 aa16.36■□□□□ 0.21
SNRPA1-205ENST00000558036 TRAV40A0A0B4J280 105 aa16.36■□□□□ 0.21
SNRPA1-205ENST00000558036 FGF2P09038 288 aa16.36■□□□□ 0.21
SNRPA1-205ENST00000558036 BRD3OSQ6XYD6 125 aa16.36■□□□□ 0.21
SNRPA1-205ENST00000558036 LRRC75A-AS1Q8N1F1 130 aa16.36■□□□□ 0.21
SNRPA1-205ENST00000558036 METTL1Q9UBP6 276 aaKnown RBP16.36■□□□□ 0.21
SNRPA1-205ENST00000558036 ZNF257Q9Y2Q1 563 aa16.36■□□□□ 0.21
SNRPA1-205ENST00000558036 AUP1Q9Y679 476 aa16.36■□□□□ 0.21
SNRPA1-205ENST00000558036 PDZD2O15018 2839 aa16.36■□□□□ 0.21
SNRPA1-205ENST00000558036 RRHO14718 337 aa16.36■□□□□ 0.21
SNRPA1-205ENST00000558036 NPFFO15130 113 aa16.36■□□□□ 0.21
SNRPA1-205ENST00000558036 SNRNP70P08621 437 aaKnown RBP16.36■□□□□ 0.21
SNRPA1-205ENST00000558036 NMBP08949 121 aa16.36■□□□□ 0.21
SNRPA1-205ENST00000558036 CD1BP29016 333 aa16.36■□□□□ 0.21
SNRPA1-205ENST00000558036 RAB14P61106 215 aa16.36■□□□□ 0.21
SNRPA1-205ENST00000558036 PRCDQ00LT1 54 aa16.36■□□□□ 0.21
SNRPA1-205ENST00000558036 HABP2Q14520 560 aaPredicted RBP16.36■□□□□ 0.21
SNRPA1-205ENST00000558036 LILRB2Q8N423 598 aa16.36■□□□□ 0.21
SNRPA1-205ENST00000558036 TMEM170AQ8WVE7 144 aa16.36■□□□□ 0.21
SNRPA1-205ENST00000558036 ATP5SQ99766 215 aa16.36■□□□□ 0.21
SNRPA1-205ENST00000558036 FBXL15Q9H469 300 aa16.36■□□□□ 0.21
SNRPA1-205ENST00000558036 PMS2P5A8MQ11 134 aa16.35■□□□□ 0.21
SNRPA1-205ENST00000558036 MMDQ15546 238 aa16.35■□□□□ 0.21
SNRPA1-205ENST00000558036 CCDC144NLQ6NUI1 221 aa16.35■□□□□ 0.21
SNRPA1-205ENST00000558036 OR4A5Q8NH83 315 aa16.35■□□□□ 0.21
SNRPA1-205ENST00000558036 Q96MF0 132 aa16.35■□□□□ 0.21
SNRPA1-205ENST00000558036 REG4Q9BYZ8 158 aa16.35■□□□□ 0.21
SNRPA1-205ENST00000558036 PLEKHA3Q9HB20 300 aa16.35■□□□□ 0.21
SNRPA1-205ENST00000558036 FKBP11Q9NYL4 201 aa16.35■□□□□ 0.21
SNRPA1-205ENST00000558036 TBL2Q9Y4P3 447 aaKnown RBP16.35■□□□□ 0.21
SNRPA1-205ENST00000558036 HBG1P69891 147 aa16.34■□□□□ 0.21
SNRPA1-205ENST00000558036 HBG2P69892 147 aa16.34■□□□□ 0.21
SNRPA1-205ENST00000558036 SLC38A11Q08AI6 406 aa16.34■□□□□ 0.21
SNRPA1-205ENST00000558036 ZNF266Q14584 549 aa16.34■□□□□ 0.21
SNRPA1-205ENST00000558036 CLLU1Q5K131 121 aa16.34■□□□□ 0.21
SNRPA1-205ENST00000558036 THNSL2Q86YJ6 484 aa16.34■□□□□ 0.21
SNRPA1-205ENST00000558036 KRTAP1-3Q8IUG1 177 aa16.34■□□□□ 0.21
SNRPA1-205ENST00000558036 OR5B3Q8NH48 314 aa16.34■□□□□ 0.21
SNRPA1-205ENST00000558036 EAF1Q96JC9 268 aaPredicted RBP16.34■□□□□ 0.21
SNRPA1-205ENST00000558036 TSNAXQ99598 290 aaKnown RBP16.34■□□□□ 0.21
SNRPA1-205ENST00000558036 ENY2Q9NPA8 101 aa16.34■□□□□ 0.21
SNRPA1-205ENST00000558036 PLA2G2EQ9NZK7 142 aa16.34■□□□□ 0.21
SNRPA1-205ENST00000558036 SIGLEC9Q9Y336 463 aa16.34■□□□□ 0.21
SNRPA1-205ENST00000558036 A0A1B0GW64 132 aa16.34■□□□□ 0.21
SNRPA1-205ENST00000558036 CRYGBP07316 175 aa16.34■□□□□ 0.21
SNRPA1-205ENST00000558036 IGHV4-38-2P0DP08 117 aa16.34■□□□□ 0.21
SNRPA1-205ENST00000558036 EIF5AP63241 154 aaKnown RBP16.34■□□□□ 0.21
SNRPA1-205ENST00000558036 RUNX1Q01196 453 aa16.34■□□□□ 0.21
SNRPA1-205ENST00000558036 TEX45Q8NA69 505 aa16.34■□□□□ 0.21
SNRPA1-205ENST00000558036 MALSU1Q96EH3 234 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms