RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 SMIM17P0DL12 118 aa2.35□□□□□ -2.03
TDP1-217ENST00000557782 S100A7P31151 101 aa2.35□□□□□ -2.03
TDP1-217ENST00000557782 CSN1S1P47710 185 aa2.35□□□□□ -2.03
TDP1-217ENST00000557782 RWDD2BP57060 319 aa2.35□□□□□ -2.03
TDP1-217ENST00000557782 TAS2R20P59543 309 aa2.35□□□□□ -2.03
TDP1-217ENST00000557782 RHEBQ15382 184 aa2.35□□□□□ -2.03
TDP1-217ENST00000557782 SCGB2B2Q4G0G5 96 aa2.35□□□□□ -2.03
TDP1-217ENST00000557782 TMEM78Q5T7P6 136 aa2.35□□□□□ -2.03
TDP1-217ENST00000557782 RPL22L1Q6P5R6 122 aaKnown RBP2.35□□□□□ -2.03
TDP1-217ENST00000557782 ZNF322Q6U7Q0 402 aaPredicted RBP2.35□□□□□ -2.03
TDP1-217ENST00000557782 SSX8Q7RTT4 187 aa2.35□□□□□ -2.03
TDP1-217ENST00000557782 PACRGLQ8N7B6 248 aa2.35□□□□□ -2.03
TDP1-217ENST00000557782 GRPEL2Q8TAA5 225 aa2.35□□□□□ -2.03
TDP1-217ENST00000557782 SLC25A40Q8TBP6 338 aa2.35□□□□□ -2.03
TDP1-217ENST00000557782 RNASE6Q93091 150 aaKnown RBP2.35□□□□□ -2.03
TDP1-217ENST00000557782 MALSU1Q96EH3 234 aa2.35□□□□□ -2.03
TDP1-217ENST00000557782 C2orf50Q96LR7 162 aa2.35□□□□□ -2.03
TDP1-217ENST00000557782 CHST6Q9GZX3 395 aa2.35□□□□□ -2.03
TDP1-217ENST00000557782 MED29Q9NX70 200 aa2.35□□□□□ -2.03
TDP1-217ENST00000557782 MCTS1Q9ULC4 181 aaKnown RBP2.35□□□□□ -2.03
TDP1-217ENST00000557782 TIMM22Q9Y584 194 aa2.35□□□□□ -2.03
TDP1-217ENST00000557782 CRB1P82279 1406 aa2.34□□□□□ -2.03
TDP1-217ENST00000557782 SSH2Q76I76 1423 aa2.34□□□□□ -2.03
TDP1-217ENST00000557782 TRBV19A0A075B6N1 114 aa2.34□□□□□ -2.03
TDP1-217ENST00000557782 IGHV3OR16-8A0A075B7F1 116 aa2.34□□□□□ -2.03
TDP1-217ENST00000557782 TRAV40A0A0B4J280 105 aa2.34□□□□□ -2.03
TDP1-217ENST00000557782 TMEM269A0A1B0GVZ9 245 aa2.34□□□□□ -2.03
TDP1-217ENST00000557782 C17orf51A8MQB3 221 aa2.34□□□□□ -2.03
TDP1-217ENST00000557782 IFNA10P01566 189 aa2.34□□□□□ -2.03
TDP1-217ENST00000557782 APOA2P02652 100 aa2.34□□□□□ -2.03
TDP1-217ENST00000557782 ZNF286BP0CG31 522 aa2.34□□□□□ -2.03
TDP1-217ENST00000557782 SCGB1A1P11684 91 aa2.34□□□□□ -2.03
TDP1-217ENST00000557782 CRHBPP24387 322 aa2.34□□□□□ -2.03
TDP1-217ENST00000557782 BLVRBP30043 206 aaPredicted RBP2.34□□□□□ -2.03
TDP1-217ENST00000557782 GLRXP35754 106 aa2.34□□□□□ -2.03
TDP1-217ENST00000557782 FXYD7P58549 80 aa2.34□□□□□ -2.03
TDP1-217ENST00000557782 CCL20P78556 96 aa2.34□□□□□ -2.03
TDP1-217ENST00000557782 LGALS9BQ3B8N2 356 aa2.34□□□□□ -2.03
TDP1-217ENST00000557782 LGALS9CQ6DKI2 356 aa2.34□□□□□ -2.03
TDP1-217ENST00000557782 SPINT4Q6UDR6 99 aa2.34□□□□□ -2.03
TDP1-217ENST00000557782 SDIM1Q6ZPB5 146 aa2.34□□□□□ -2.03
TDP1-217ENST00000557782 C12orf45Q8N5I9 185 aaPredicted RBP2.34□□□□□ -2.03
TDP1-217ENST00000557782 OR13C4Q8NGS5 318 aa2.34□□□□□ -2.03
TDP1-217ENST00000557782 STARD4Q96DR4 205 aa2.34□□□□□ -2.03
TDP1-217ENST00000557782 ZNF2Q9BSG1 426 aaPredicted RBP2.34□□□□□ -2.03
TDP1-217ENST00000557782 UPK3BQ9BT76 320 aa2.34□□□□□ -2.03
TDP1-217ENST00000557782 C6orf62Q9GZU0 229 aaPredicted RBP2.34□□□□□ -2.03
TDP1-217ENST00000557782 PBOV1Q9GZY1 135 aa2.34□□□□□ -2.03
TDP1-217ENST00000557782 SMDT1Q9H4I9 107 aa2.34□□□□□ -2.03
TDP1-217ENST00000557782 XAGE1AQ9HD64 81 aa2.34□□□□□ -2.03
TDP1-217ENST00000557782 GINS2Q9Y248 185 aa2.34□□□□□ -2.03
TDP1-217ENST00000557782 CYSLTR1Q9Y271 337 aa2.34□□□□□ -2.03
TDP1-217ENST00000557782 NID2Q14112 1375 aa2.34□□□□□ -2.04
TDP1-217ENST00000557782 SIPA1L1O43166 1804 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 MYH11P35749 1972 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 IGLV4-60A0A075B6I1 120 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 TRAV4A0A0B4J268 109 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 SIGLEC16A6NMB1 481 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 E7EQ34 232 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 J3QRK9 145 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 LY6HO94772 140 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 IGHV1-69P01742 117 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 PRM2P04554 102 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 KRTAP1-4P0C5Y4 121 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 CCL3P10147 92 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 HIST1H2BOP23527 126 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 HIST1H2BBP33778 126 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 G6PCP35575 357 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 LPAR6P43657 344 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 ATP5G3P48201 142 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 RBM11P57052 281 aaKnown RBP2.33□□□□□ -2.04
TDP1-217ENST00000557782 KLF3P57682 345 aaPredicted RBP2.33□□□□□ -2.04
TDP1-217ENST00000557782 HIST1H2BDP58876 126 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 TAS2R30P59541 319 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 DEFA3P59666 94 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 AP1S1P61966 158 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 HIST1H2BCP62807 126 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 AKR1C1Q04828 323 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 DHRS2Q13268 280 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 SMCO1Q147U7 214 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 HIST2H2BEQ16778 126 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 TMEM128Q5BJH2 165 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.33□□□□□ -2.04
TDP1-217ENST00000557782 LYRM7Q5U5X0 104 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 SAMD13Q5VXD3 122 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 ZNF660Q6AZW8 331 aaPredicted RBP2.33□□□□□ -2.04
TDP1-217ENST00000557782 Q6P435 159 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 TOMM20LQ6UXN7 152 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 SPATA12Q7Z6I5 190 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 OSR2Q8N2R0 312 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 OR13D1Q8NGV5 346 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 OR10J5Q8NHC4 309 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 MAFIPQ8WZ33 124 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 HIST1H2BHQ93079 126 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 IGF2BP2-AS1Q96M15 143 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 LYSMD1Q96S90 227 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 SERPINI1Q99574 410 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 HIST1H2BNQ99877 126 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 HIST1H2BMQ99879 126 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 SCRT1Q9BWW7 348 aa2.33□□□□□ -2.04
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