RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 ZNF320A2RRD8 509 aa11.05□□□□□ -0.64
SHMT2-235ENST00000557740 ZNF785A8K8V0 405 aa11.05□□□□□ -0.64
SHMT2-235ENST00000557740 MYOD1P15172 320 aa11.05□□□□□ -0.64
SHMT2-235ENST00000557740 NQO2P16083 231 aa11.05□□□□□ -0.64
SHMT2-235ENST00000557740 CTRB1P17538 263 aa11.05□□□□□ -0.64
SHMT2-235ENST00000557740 TAS2R31P59538 309 aa11.05□□□□□ -0.64
SHMT2-235ENST00000557740 AADACL3Q5VUY0 350 aa11.05□□□□□ -0.64
SHMT2-235ENST00000557740 CTRB2Q6GPI1 263 aa11.05□□□□□ -0.64
SHMT2-235ENST00000557740 GPHB5Q86YW7 130 aa11.05□□□□□ -0.64
SHMT2-235ENST00000557740 OR5AP2Q8NGF4 316 aa11.05□□□□□ -0.64
SHMT2-235ENST00000557740 OR51H1Q8NH63 302 aa11.05□□□□□ -0.64
SHMT2-235ENST00000557740 CD300LFQ8TDQ1 290 aa11.05□□□□□ -0.64
SHMT2-235ENST00000557740 COMMD5Q9GZQ3 224 aa11.05□□□□□ -0.64
SHMT2-235ENST00000557740 SRD5A3Q9H8P0 318 aa11.05□□□□□ -0.64
SHMT2-235ENST00000557740 RETNQ9HD89 108 aa11.05□□□□□ -0.64
SHMT2-235ENST00000557740 ZC4H2Q9NQZ6 224 aa11.05□□□□□ -0.64
SHMT2-235ENST00000557740 DMRT1Q9Y5R6 373 aa11.05□□□□□ -0.64
SHMT2-235ENST00000557740 IGLV11-55A0A075B6I3 123 aa11.04□□□□□ -0.64
SHMT2-235ENST00000557740 TRBV7-1A0A0A6YYK4 115 aa11.04□□□□□ -0.64
SHMT2-235ENST00000557740 LCE6AA0A183 80 aa11.04□□□□□ -0.64
SHMT2-235ENST00000557740 MEIS3P1A6NDR6 274 aa11.04□□□□□ -0.64
SHMT2-235ENST00000557740 TMEM127O75204 238 aa11.04□□□□□ -0.64
SHMT2-235ENST00000557740 HPRT1P00492 218 aa11.04□□□□□ -0.64
SHMT2-235ENST00000557740 CD7P09564 240 aa11.04□□□□□ -0.64
SHMT2-235ENST00000557740 EDN2P20800 178 aa11.04□□□□□ -0.64
SHMT2-235ENST00000557740 OR2B8PP59922 312 aa11.04□□□□□ -0.64
SHMT2-235ENST00000557740 KCTD21Q4G0X4 260 aa11.04□□□□□ -0.64
SHMT2-235ENST00000557740 ZNF818PQ6ZRF7 136 aa11.04□□□□□ -0.64
SHMT2-235ENST00000557740 SLC16A13Q7RTY0 426 aa11.04□□□□□ -0.64
SHMT2-235ENST00000557740 CROCCP3Q8IVE0 287 aa11.04□□□□□ -0.64
SHMT2-235ENST00000557740 DEFB125Q8N687 156 aa11.04□□□□□ -0.64
SHMT2-235ENST00000557740 DMBX1Q8NFW5 382 aa11.04□□□□□ -0.64
SHMT2-235ENST00000557740 GIMAP1Q8WWP7 306 aa11.04□□□□□ -0.64
SHMT2-235ENST00000557740 CACNG8Q8WXS5 425 aa11.04□□□□□ -0.64
SHMT2-235ENST00000557740 BORCS5Q969J3 196 aa11.04□□□□□ -0.64
SHMT2-235ENST00000557740 WDR89Q96FK6 387 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-235ENST00000557740 CXorf58Q96LI9 332 aa11.04□□□□□ -0.64
SHMT2-235ENST00000557740 WFDC10AQ9H1F0 79 aa11.04□□□□□ -0.64
SHMT2-235ENST00000557740 EHFQ9NZC4 300 aa11.04□□□□□ -0.64
SHMT2-235ENST00000557740 MFSD2BA6NFX1 497 aa11.03□□□□□ -0.64
SHMT2-235ENST00000557740 A8MWP6 167 aa11.03□□□□□ -0.64
SHMT2-235ENST00000557740 OR11H12B2RN74 326 aa11.03□□□□□ -0.64
SHMT2-235ENST00000557740 S1PR2O95136 353 aa11.03□□□□□ -0.64
SHMT2-235ENST00000557740 CBLN1P23435 193 aa11.03□□□□□ -0.64
SHMT2-235ENST00000557740 ERVK-16P61578 105 aa11.03□□□□□ -0.64
SHMT2-235ENST00000557740 KLK9Q2XQG4 91 aa11.03□□□□□ -0.64
SHMT2-235ENST00000557740 ZNF57Q68EA5 555 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-235ENST00000557740 S100A16Q96FQ6 103 aaKnown RBP11.03□□□□□ -0.64
SHMT2-235ENST00000557740 FAM110AQ9BQ89 295 aa11.03□□□□□ -0.64
SHMT2-235ENST00000557740 QTRT1Q9BXR0 403 aaKnown RBP11.03□□□□□ -0.64
SHMT2-235ENST00000557740 HIPK2Q9H2X6 1198 aa11.03□□□□□ -0.64
SHMT2-235ENST00000557740 PLEKHA2Q9HB19 425 aa11.03□□□□□ -0.64
SHMT2-235ENST00000557740 TMEM140Q9NV12 185 aa11.03□□□□□ -0.64
SHMT2-235ENST00000557740 GAR1Q9NY12 217 aaKnown RBP11.03□□□□□ -0.64
SHMT2-235ENST00000557740 COMMD9Q9P000 198 aa11.03□□□□□ -0.64
SHMT2-235ENST00000557740 KLK9Q9UKQ9 250 aa11.03□□□□□ -0.64
SHMT2-235ENST00000557740 TRAV3A0A0B4J244 114 aa11.02□□□□□ -0.65
SHMT2-235ENST00000557740 IGLC7A0M8Q6 106 aa11.02□□□□□ -0.65
SHMT2-235ENST00000557740 TMEM213A2RRL7 107 aa11.02□□□□□ -0.65
SHMT2-235ENST00000557740 CGB1A6NKQ9 187 aa11.02□□□□□ -0.65
SHMT2-235ENST00000557740 UPK2O00526 184 aa11.02□□□□□ -0.65
SHMT2-235ENST00000557740 CYB5BO43169 146 aa11.02□□□□□ -0.65
SHMT2-235ENST00000557740 XRCC3O43542 346 aa11.02□□□□□ -0.65
SHMT2-235ENST00000557740 GPR183P32249 361 aa11.02□□□□□ -0.65
SHMT2-235ENST00000557740 POU2AF1Q16633 256 aa11.02□□□□□ -0.65
SHMT2-235ENST00000557740 UBE2NLQ5JXB2 153 aa11.02□□□□□ -0.65
SHMT2-235ENST00000557740 TMEM69Q5SWH9 247 aa11.02□□□□□ -0.65
SHMT2-235ENST00000557740 LINC00322Q6ZN03 302 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-235ENST00000557740 TMEM61Q8N0U2 210 aa11.02□□□□□ -0.65
SHMT2-235ENST00000557740 UXS1Q8NBZ7 420 aa11.02□□□□□ -0.65
SHMT2-235ENST00000557740 SRSF8Q9BRL6 282 aaKnown RBP11.02□□□□□ -0.65
SHMT2-235ENST00000557740 THYN1Q9P016 225 aa11.02□□□□□ -0.65
SHMT2-235ENST00000557740 SELENOKQ9Y6D0 94 aa11.02□□□□□ -0.65
SHMT2-235ENST00000557740 RBMY1BA6NDE4 496 aaKnown RBP11.01□□□□□ -0.65
SHMT2-235ENST00000557740 RBMY1EA6NEQ0 496 aaKnown RBP11.01□□□□□ -0.65
SHMT2-235ENST00000557740 RLN1P04808 185 aa11.01□□□□□ -0.65
SHMT2-235ENST00000557740 CLEC3BP05452 202 aa11.01□□□□□ -0.65
SHMT2-235ENST00000557740 FGF2P09038 288 aa11.01□□□□□ -0.65
SHMT2-235ENST00000557740 RBMY1DP0C7P1 496 aaKnown RBP11.01□□□□□ -0.65
SHMT2-235ENST00000557740 RPA2P15927 270 aa11.01□□□□□ -0.65
SHMT2-235ENST00000557740 TAS2R46P59540 309 aa11.01□□□□□ -0.65
SHMT2-235ENST00000557740 THOC7Q6I9Y2 204 aaKnown RBP11.01□□□□□ -0.65
SHMT2-235ENST00000557740 SAMD12Q8N8I0 201 aa11.01□□□□□ -0.65
SHMT2-235ENST00000557740 OR52B4Q8NGK2 314 aa11.01□□□□□ -0.65
SHMT2-235ENST00000557740 OR5H2Q8NGV7 314 aa11.01□□□□□ -0.65
SHMT2-235ENST00000557740 IL17DQ8TAD2 202 aa11.01□□□□□ -0.65
SHMT2-235ENST00000557740 ZNF502Q8TBZ5 544 aa11.01□□□□□ -0.65
SHMT2-235ENST00000557740 VCX3AQ9NNX9 186 aa11.01□□□□□ -0.65
SHMT2-235ENST00000557740 MLXQ9UH92 298 aa11.01□□□□□ -0.65
SHMT2-235ENST00000557740 MARCH11A6NNE9 402 aa11□□□□□ -0.65
SHMT2-235ENST00000557740 SCAF4O95104 1147 aaKnown RBP11□□□□□ -0.65
SHMT2-235ENST00000557740 GNRHRP30968 328 aa11□□□□□ -0.65
SHMT2-235ENST00000557740 RFX2P48378 723 aa11□□□□□ -0.65
SHMT2-235ENST00000557740 TAS2R20P59543 309 aa11□□□□□ -0.65
SHMT2-235ENST00000557740 ANKRD55Q3KP44 614 aa11□□□□□ -0.65
SHMT2-235ENST00000557740 PLET1Q6UQ28 207 aa11□□□□□ -0.65
SHMT2-235ENST00000557740 BTNL8Q6UX41 500 aa11□□□□□ -0.65
SHMT2-235ENST00000557740 CMTM1Q8IZ96 169 aa11□□□□□ -0.65
SHMT2-235ENST00000557740 GDPD1Q8N9F7 314 aa11□□□□□ -0.65
SHMT2-235ENST00000557740 TSPAN14Q8NG11 270 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms