RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 PLPPR2Q96GM1 343 aa9.77□□□□□ -0.84
VIPAS39-211ENST00000557658 C1orf159Q96HA4 380 aa9.77□□□□□ -0.84
VIPAS39-211ENST00000557658 LRFN3Q9BTN0 628 aa9.77□□□□□ -0.84
VIPAS39-211ENST00000557658 OPN3Q9H1Y3 402 aaPredicted RBP9.77□□□□□ -0.84
VIPAS39-211ENST00000557658 ZNF586Q9NXT0 402 aa9.77□□□□□ -0.84
VIPAS39-211ENST00000557658 JPT1Q9UK76 154 aa9.77□□□□□ -0.84
VIPAS39-211ENST00000557658 TRAV3A0A0B4J244 114 aa9.77□□□□□ -0.85
VIPAS39-211ENST00000557658 A6NNC1 897 aa9.77□□□□□ -0.85
VIPAS39-211ENST00000557658 MT-ND6P03923 174 aa9.77□□□□□ -0.85
VIPAS39-211ENST00000557658 BRS3P32247 399 aa9.77□□□□□ -0.85
VIPAS39-211ENST00000557658 KIR2DS2P43631 304 aa9.77□□□□□ -0.85
VIPAS39-211ENST00000557658 MORN2Q502X0 79 aa9.77□□□□□ -0.85
VIPAS39-211ENST00000557658 CYB5R2Q6BCY4 276 aa9.77□□□□□ -0.85
VIPAS39-211ENST00000557658 WDR73Q6P4I2 378 aa9.77□□□□□ -0.85
VIPAS39-211ENST00000557658 GCNT2Q8N0V5 402 aa9.77□□□□□ -0.85
VIPAS39-211ENST00000557658 OR8I2Q8N0Y5 310 aa9.77□□□□□ -0.85
VIPAS39-211ENST00000557658 MDS2Q8NDY4 140 aa9.77□□□□□ -0.85
VIPAS39-211ENST00000557658 OR4P4Q8NGL7 312 aa9.77□□□□□ -0.85
VIPAS39-211ENST00000557658 CDX2Q99626 313 aaPredicted RBP9.77□□□□□ -0.85
VIPAS39-211ENST00000557658 SPRR3Q9UBC9 169 aa9.77□□□□□ -0.85
VIPAS39-211ENST00000557658 V9GYV3 84 aa9.77□□□□□ -0.85
VIPAS39-211ENST00000557658 C21orf140B9A014 251 aa9.76□□□□□ -0.85
VIPAS39-211ENST00000557658 F2Z2F3 143 aa9.76□□□□□ -0.85
VIPAS39-211ENST00000557658 FOXH1O75593 365 aa9.76□□□□□ -0.85
VIPAS39-211ENST00000557658 TDGF1P13385 188 aa9.76□□□□□ -0.85
VIPAS39-211ENST00000557658 TNFSF10P50591 281 aa9.76□□□□□ -0.85
VIPAS39-211ENST00000557658 ARSJQ5FYB0 599 aaPredicted RBP9.76□□□□□ -0.85
VIPAS39-211ENST00000557658 CD177Q8N6Q3 437 aa9.76□□□□□ -0.85
VIPAS39-211ENST00000557658 OR4B1Q8NGF8 309 aa9.76□□□□□ -0.85
VIPAS39-211ENST00000557658 FOXJ2Q9P0K8 574 aa9.76□□□□□ -0.85
VIPAS39-211ENST00000557658 ARL2-SNX15V9GYD0 113 aa9.76□□□□□ -0.85
VIPAS39-211ENST00000557658 CD46P15529 392 aa9.76□□□□□ -0.85
VIPAS39-211ENST00000557658 NPY1RP25929 384 aa9.76□□□□□ -0.85
VIPAS39-211ENST00000557658 PRDX2P32119 198 aa9.76□□□□□ -0.85
VIPAS39-211ENST00000557658 COMPP49747 757 aaPredicted RBP9.76□□□□□ -0.85
VIPAS39-211ENST00000557658 GNG4P50150 75 aa9.76□□□□□ -0.85
VIPAS39-211ENST00000557658 ARG2P78540 354 aa9.76□□□□□ -0.85
VIPAS39-211ENST00000557658 COX19Q49B96 90 aa9.76□□□□□ -0.85
VIPAS39-211ENST00000557658 RPL39P5Q59GN2 51 aa9.76□□□□□ -0.85
VIPAS39-211ENST00000557658 SFXN3Q9BWM7 321 aa9.76□□□□□ -0.85
VIPAS39-211ENST00000557658 LPAR2Q9HBW0 351 aa9.76□□□□□ -0.85
VIPAS39-211ENST00000557658 ENY2Q9NPA8 101 aa9.76□□□□□ -0.85
VIPAS39-211ENST00000557658 FRYLO94915 3013 aa9.75□□□□□ -0.85
VIPAS39-211ENST00000557658 CGAP01215 116 aa9.75□□□□□ -0.85
VIPAS39-211ENST00000557658 GPX1P07203 203 aa9.75□□□□□ -0.85
VIPAS39-211ENST00000557658 OR10J4P0C629 311 aa9.75□□□□□ -0.85
VIPAS39-211ENST00000557658 KRTDAPP60985 99 aa9.75□□□□□ -0.85
VIPAS39-211ENST00000557658 OR5I1Q13606 314 aa9.75□□□□□ -0.85
VIPAS39-211ENST00000557658 BATFQ16520 125 aa9.75□□□□□ -0.85
VIPAS39-211ENST00000557658 SLC24A4Q8NFF2 622 aa9.75□□□□□ -0.85
VIPAS39-211ENST00000557658 LRRC29Q8WV35 223 aa9.75□□□□□ -0.85
VIPAS39-211ENST00000557658 CORO2AQ92828 525 aa9.75□□□□□ -0.85
VIPAS39-211ENST00000557658 FAM103A1Q9BTL3 118 aaKnown RBP9.75□□□□□ -0.85
VIPAS39-211ENST00000557658 GNB4Q9HAV0 340 aa9.75□□□□□ -0.85
VIPAS39-211ENST00000557658 TMEM167BQ9NRX6 74 aa9.75□□□□□ -0.85
VIPAS39-211ENST00000557658 SLC25A10Q9UBX3 287 aaPredicted RBP9.75□□□□□ -0.85
VIPAS39-211ENST00000557658 NAT8BQ9UHF3 227 aa9.75□□□□□ -0.85
VIPAS39-211ENST00000557658 FBXL7Q9UJT9 491 aa9.75□□□□□ -0.85
VIPAS39-211ENST00000557658 HELTA6NFD8 242 aa9.75□□□□□ -0.85
VIPAS39-211ENST00000557658 C15orf61A6NNL5 157 aa9.75□□□□□ -0.85
VIPAS39-211ENST00000557658 FRMD6-AS1P0C7T7 363 aa9.75□□□□□ -0.85
VIPAS39-211ENST00000557658 HOXC12P31275 282 aa9.75□□□□□ -0.85
VIPAS39-211ENST00000557658 CENPWQ5EE01 88 aa9.75□□□□□ -0.85
VIPAS39-211ENST00000557658 OR10J3Q5JRS4 329 aa9.75□□□□□ -0.85
VIPAS39-211ENST00000557658 FAM90A1Q86YD7 464 aa9.75□□□□□ -0.85
VIPAS39-211ENST00000557658 UBALD2Q8IYN6 164 aa9.75□□□□□ -0.85
VIPAS39-211ENST00000557658 ST6GALNAC3Q8NDV1 305 aa9.75□□□□□ -0.85
VIPAS39-211ENST00000557658 OR4S2Q8NH73 311 aa9.75□□□□□ -0.85
VIPAS39-211ENST00000557658 RBM14Q96PK6 669 aaKnown RBP9.75□□□□□ -0.85
VIPAS39-211ENST00000557658 RNF2Q99496 336 aa9.75□□□□□ -0.85
VIPAS39-211ENST00000557658 MSL2Q9HCI7 577 aa9.75□□□□□ -0.85
VIPAS39-211ENST00000557658 IL19Q9UHD0 177 aa9.75□□□□□ -0.85
VIPAS39-211ENST00000557658 SLC45A2Q9UMX9 530 aa9.75□□□□□ -0.85
VIPAS39-211ENST00000557658 FREM2Q5SZK8 3169 aa9.75□□□□□ -0.85
VIPAS39-211ENST00000557658 DIRC3C9JPN6 131 aa9.74□□□□□ -0.85
VIPAS39-211ENST00000557658 NPSP0C0P6 89 aa9.74□□□□□ -0.85
VIPAS39-211ENST00000557658 LINC00614P0C842 121 aa9.74□□□□□ -0.85
VIPAS39-211ENST00000557658 CX3CL1P78423 397 aa9.74□□□□□ -0.85
VIPAS39-211ENST00000557658 PRR20EP86478 221 aa9.74□□□□□ -0.85
VIPAS39-211ENST00000557658 PRR20CP86479 221 aa9.74□□□□□ -0.85
VIPAS39-211ENST00000557658 PRR20DP86480 221 aa9.74□□□□□ -0.85
VIPAS39-211ENST00000557658 PRR20BP86481 221 aa9.74□□□□□ -0.85
VIPAS39-211ENST00000557658 PRR20AP86496 221 aa9.74□□□□□ -0.85
VIPAS39-211ENST00000557658 TMEM164Q5U3C3 297 aa9.74□□□□□ -0.85
VIPAS39-211ENST00000557658 PPP1R35Q8TAP8 253 aa9.74□□□□□ -0.85
VIPAS39-211ENST00000557658 TUBG2Q9NRH3 451 aa9.74□□□□□ -0.85
VIPAS39-211ENST00000557658 SAA2-SAA4A0A096LPE2 208 aa9.74□□□□□ -0.85
VIPAS39-211ENST00000557658 LAMTOR5O43504 91 aa9.74□□□□□ -0.85
VIPAS39-211ENST00000557658 AGFG2O95081 481 aa9.74□□□□□ -0.85
VIPAS39-211ENST00000557658 IGFBP2P18065 325 aa9.74□□□□□ -0.85
VIPAS39-211ENST00000557658 FABP6P51161 128 aa9.74□□□□□ -0.85
VIPAS39-211ENST00000557658 HSPE1P61604 102 aaKnown RBP9.74□□□□□ -0.85
VIPAS39-211ENST00000557658 MZT1Q08AG7 82 aa9.74□□□□□ -0.85
VIPAS39-211ENST00000557658 PSG5Q15238 335 aa9.74□□□□□ -0.85
VIPAS39-211ENST00000557658 TIGITQ495A1 244 aa9.74□□□□□ -0.85
VIPAS39-211ENST00000557658 COL5A1-AS1Q5SY13 56 aa9.74□□□□□ -0.85
VIPAS39-211ENST00000557658 Q6ZT83 130 aa9.74□□□□□ -0.85
VIPAS39-211ENST00000557658 MIR17HGQ75NE6 70 aa9.74□□□□□ -0.85
VIPAS39-211ENST00000557658 IFI27L2Q9H2X8 130 aa9.74□□□□□ -0.85
VIPAS39-211ENST00000557658 OSTCQ9NRP0 149 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms