RNA–Protein interactions for RNA: ENST00000557599.5

PRKCH-227, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-227ENST00000557599 E5RGE8 158 aa8.45□□□□□ -1.06
PRKCH-227ENST00000557599 UPK2O00526 184 aa8.45□□□□□ -1.06
PRKCH-227ENST00000557599 RRHO14718 337 aa8.45□□□□□ -1.06
PRKCH-227ENST00000557599 NBR2O15453 112 aa8.45□□□□□ -1.06
PRKCH-227ENST00000557599 SCAF4O95104 1147 aaKnown RBP8.45□□□□□ -1.06
PRKCH-227ENST00000557599 MBPP02686 304 aaPredicted RBP8.45□□□□□ -1.06
PRKCH-227ENST00000557599 SLC25A4P12235 298 aa8.45□□□□□ -1.06
PRKCH-227ENST00000557599 MAS1LP35410 378 aa8.45□□□□□ -1.06
PRKCH-227ENST00000557599 HOXA1P49639 335 aaPredicted RBP8.45□□□□□ -1.06
PRKCH-227ENST00000557599 F2RL1P55085 397 aa8.45□□□□□ -1.06
PRKCH-227ENST00000557599 OR2B8PP59922 312 aa8.45□□□□□ -1.06
PRKCH-227ENST00000557599 SPCS3P61009 180 aa8.45□□□□□ -1.06
PRKCH-227ENST00000557599 HNF4GQ14541 408 aa8.45□□□□□ -1.06
PRKCH-227ENST00000557599 PRSS54Q6PEW0 395 aa8.45□□□□□ -1.06
PRKCH-227ENST00000557599 VKORC1L1Q8N0U8 176 aa8.45□□□□□ -1.06
PRKCH-227ENST00000557599 PUSL1Q8N0Z8 303 aaKnown RBP8.45□□□□□ -1.06
PRKCH-227ENST00000557599 PIP4P2Q8N4L2 257 aa8.45□□□□□ -1.06
PRKCH-227ENST00000557599 OR1L8Q8NGR8 309 aa8.45□□□□□ -1.06
PRKCH-227ENST00000557599 OR5B3Q8NH48 314 aa8.45□□□□□ -1.06
PRKCH-227ENST00000557599 OR52E5Q8NH55 327 aa8.45□□□□□ -1.06
PRKCH-227ENST00000557599 TMEM167AQ8TBQ9 72 aa8.45□□□□□ -1.06
PRKCH-227ENST00000557599 CFHR4Q92496 578 aa8.45□□□□□ -1.06
PRKCH-227ENST00000557599 EAF1Q96JC9 268 aaPredicted RBP8.45□□□□□ -1.06
PRKCH-227ENST00000557599 MEGF9Q9H1U4 602 aa8.45□□□□□ -1.06
PRKCH-227ENST00000557599 HIPK2Q9H2X6 1198 aa8.45□□□□□ -1.06
PRKCH-227ENST00000557599 MBD2Q9UBB5 411 aa8.45□□□□□ -1.06
PRKCH-227ENST00000557599 METTL1Q9UBP6 276 aaKnown RBP8.45□□□□□ -1.06
PRKCH-227ENST00000557599 FOXA2Q9Y261 457 aaPredicted RBP8.45□□□□□ -1.06
PRKCH-227ENST00000557599 RCL1Q9Y2P8 373 aaKnown RBP8.45□□□□□ -1.06
PRKCH-227ENST00000557599 ZNF257Q9Y2Q1 563 aa8.45□□□□□ -1.06
PRKCH-227ENST00000557599 NSG2Q9Y328 171 aa8.45□□□□□ -1.06
PRKCH-227ENST00000557599 OR51B2Q9Y5P1 312 aa8.45□□□□□ -1.06
PRKCH-227ENST00000557599 PRKDCP78527 4128 aaKnown RBP8.44□□□□□ -1.06
PRKCH-227ENST00000557599 A0A1W2PN81 502 aa8.44□□□□□ -1.06
PRKCH-227ENST00000557599 K7EPK0 472 aa8.44□□□□□ -1.06
PRKCH-227ENST00000557599 SYNGR2O43760 224 aa8.44□□□□□ -1.06
PRKCH-227ENST00000557599 SSSCA1O60232 199 aa8.44□□□□□ -1.06
PRKCH-227ENST00000557599 DEDDO75618 318 aa8.44□□□□□ -1.06
PRKCH-227ENST00000557599 OR9G9P0C7N8 305 aa8.44□□□□□ -1.06
PRKCH-227ENST00000557599 P0C879 139 aa8.44□□□□□ -1.06
PRKCH-227ENST00000557599 CHRNA7P36544 502 aa8.44□□□□□ -1.06
PRKCH-227ENST00000557599 RELBQ01201 579 aa8.44□□□□□ -1.06
PRKCH-227ENST00000557599 TNFRSF9Q07011 255 aa8.44□□□□□ -1.06
PRKCH-227ENST00000557599 PSG5Q15238 335 aa8.44□□□□□ -1.06
PRKCH-227ENST00000557599 IZUMO4Q1ZYL8 232 aa8.44□□□□□ -1.06
PRKCH-227ENST00000557599 KLF17Q5JT82 389 aaPredicted RBP8.44□□□□□ -1.06
PRKCH-227ENST00000557599 LDLRAD2Q5SZI1 272 aa8.44□□□□□ -1.06
PRKCH-227ENST00000557599 RBMS3Q6XE24 437 aaKnown RBP8.44□□□□□ -1.06
PRKCH-227ENST00000557599 ZNF546Q86UE3 836 aa8.44□□□□□ -1.06
PRKCH-227ENST00000557599 ZNF429Q86V71 674 aa8.44□□□□□ -1.06
PRKCH-227ENST00000557599 FAM71E2Q8N5Q1 922 aa8.44□□□□□ -1.06
PRKCH-227ENST00000557599 OR5R1Q8NH85 324 aa8.44□□□□□ -1.06
PRKCH-227ENST00000557599 ZNF418Q8TF45 676 aaPredicted RBP8.44□□□□□ -1.06
PRKCH-227ENST00000557599 WDR89Q96FK6 387 aaPredicted RBP8.44□□□□□ -1.06
PRKCH-227ENST00000557599 SSX3Q99909 188 aa8.44□□□□□ -1.06
PRKCH-227ENST00000557599 RASL11BQ9BPW5 248 aa8.44□□□□□ -1.06
PRKCH-227ENST00000557599 HINT2Q9BX68 163 aa8.44□□□□□ -1.06
PRKCH-227ENST00000557599 SLC25A31Q9H0C2 315 aa8.44□□□□□ -1.06
PRKCH-227ENST00000557599 PLEKHA3Q9HB20 300 aa8.44□□□□□ -1.06
PRKCH-227ENST00000557599 SRRM4A7MD48 611 aaKnown RBP8.43□□□□□ -1.06
PRKCH-227ENST00000557599 HMSDA8MTL9 139 aa8.43□□□□□ -1.06
PRKCH-227ENST00000557599 SMLR1H3BR10 107 aa8.43□□□□□ -1.06
PRKCH-227ENST00000557599 BOLA2-SMG1P6H3BVE0 249 aa8.43□□□□□ -1.06
PRKCH-227ENST00000557599 M0QZK8 103 aa8.43□□□□□ -1.06
PRKCH-227ENST00000557599 PITX3O75364 302 aa8.43□□□□□ -1.06
PRKCH-227ENST00000557599 NXPH3O95157 252 aa8.43□□□□□ -1.06
PRKCH-227ENST00000557599 CNIH1O95406 144 aa8.43□□□□□ -1.06
PRKCH-227ENST00000557599 CAV2P51636 162 aa8.43□□□□□ -1.06
PRKCH-227ENST00000557599 HSPE1P61604 102 aaKnown RBP8.43□□□□□ -1.06
PRKCH-227ENST00000557599 POLR2GP62487 172 aaKnown RBP eCLIP8.43□□□□□ -1.06
PRKCH-227ENST00000557599 ID3Q02535 119 aa8.43□□□□□ -1.06
PRKCH-227ENST00000557599 EBI3Q14213 229 aa8.43□□□□□ -1.06
PRKCH-227ENST00000557599 TNXAQ16473 311 aa8.43□□□□□ -1.06
PRKCH-227ENST00000557599 CXorf66Q5JRM2 361 aaPredicted RBP8.43□□□□□ -1.06
PRKCH-227ENST00000557599 C12orf54Q6X4T0 127 aa8.43□□□□□ -1.06
PRKCH-227ENST00000557599 C9orf139Q6ZV77 190 aa8.43□□□□□ -1.06
PRKCH-227ENST00000557599 C16orf82Q7Z2V1 217 aa8.43□□□□□ -1.06
PRKCH-227ENST00000557599 PPP1R27Q86WC6 154 aa8.43□□□□□ -1.06
PRKCH-227ENST00000557599 DYNAPQ8N1N2 210 aa8.43□□□□□ -1.06
PRKCH-227ENST00000557599 NPBQ8NG41 125 aa8.43□□□□□ -1.06
PRKCH-227ENST00000557599 DTD1Q8TEA8 209 aa8.43□□□□□ -1.06
PRKCH-227ENST00000557599 C17orf50Q8WW18 174 aa8.43□□□□□ -1.06
PRKCH-227ENST00000557599 QTRT1Q9BXR0 403 aaKnown RBP8.43□□□□□ -1.06
PRKCH-227ENST00000557599 MAGT1Q9H0U3 335 aa8.43□□□□□ -1.06
PRKCH-227ENST00000557599 HEYLQ9NQ87 328 aaPredicted RBP8.43□□□□□ -1.06
PRKCH-227ENST00000557599 HSPB7Q9UBY9 170 aa8.43□□□□□ -1.06
PRKCH-227ENST00000557599 TCF19Q9Y242 345 aa8.43□□□□□ -1.06
PRKCH-227ENST00000557599 MOB4Q9Y3A3 225 aa8.43□□□□□ -1.06
PRKCH-227ENST00000557599 A0A0D9SG52 128 aa8.42□□□□□ -1.06
PRKCH-227ENST00000557599 ARPC5O15511 151 aa8.42□□□□□ -1.06
PRKCH-227ENST00000557599 WIPF1O43516 503 aa8.42□□□□□ -1.06
PRKCH-227ENST00000557599 CHST1O43916 411 aa8.42□□□□□ -1.06
PRKCH-227ENST00000557599 OR2F2O95006 317 aa8.42□□□□□ -1.06
PRKCH-227ENST00000557599 NDUFA3O95167 84 aa8.42□□□□□ -1.06
PRKCH-227ENST00000557599 IGLV2-23P01705 113 aa8.42□□□□□ -1.06
PRKCH-227ENST00000557599 CD24P25063 80 aa8.42□□□□□ -1.06
PRKCH-227ENST00000557599 RPL27AP46776 148 aaKnown RBP8.42□□□□□ -1.06
PRKCH-227ENST00000557599 P2RY1P47900 373 aa8.42□□□□□ -1.06
PRKCH-227ENST00000557599 TAS2R30P59541 319 aa8.42□□□□□ -1.06
PRKCH-227ENST00000557599 GNB1P62873 340 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms