RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 FAM212BQ9NTI7 297 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-230ENST00000557427 LINC00312Q9Y6C7 94 aa9.97□□□□□ -0.81
SHMT2-230ENST00000557427 SESN1Q9Y6P5 492 aa9.97□□□□□ -0.81
SHMT2-230ENST00000557427 TRGV10A0A0A0MS01 117 aa9.96□□□□□ -0.82
SHMT2-230ENST00000557427 MFSD2BA6NFX1 497 aa9.96□□□□□ -0.82
SHMT2-230ENST00000557427 PITX3O75364 302 aa9.96□□□□□ -0.82
SHMT2-230ENST00000557427 EIF4EBP1Q13541 118 aaPredicted RBP9.96□□□□□ -0.82
SHMT2-230ENST00000557427 PRAMEF5Q5TYX0 476 aa9.96□□□□□ -0.82
SHMT2-230ENST00000557427 EIF5AL1Q6IS14 154 aaKnown RBP9.96□□□□□ -0.82
SHMT2-230ENST00000557427 HSD17B13Q7Z5P4 300 aaPredicted RBP9.96□□□□□ -0.82
SHMT2-230ENST00000557427 FAM219AQ8IW50 185 aa9.96□□□□□ -0.82
SHMT2-230ENST00000557427 EIF4E3Q8N5X7 224 aaKnown RBP9.96□□□□□ -0.82
SHMT2-230ENST00000557427 OR2T6Q8NHC8 308 aa9.96□□□□□ -0.82
SHMT2-230ENST00000557427 SERTAD4Q9NUC0 356 aa9.96□□□□□ -0.82
SHMT2-230ENST00000557427 SDHAF2Q9NX18 166 aa9.96□□□□□ -0.82
SHMT2-230ENST00000557427 OR6C3Q9NZP0 311 aa9.96□□□□□ -0.82
SHMT2-230ENST00000557427 FBXL17Q9UF56 701 aa9.96□□□□□ -0.82
SHMT2-230ENST00000557427 JPT1Q9UK76 154 aa9.96□□□□□ -0.82
SHMT2-230ENST00000557427 HILPDAQ9Y5L2 63 aa9.96□□□□□ -0.82
SHMT2-230ENST00000557427 F2RL2O00254 374 aa9.95□□□□□ -0.82
SHMT2-230ENST00000557427 YPEL1O60688 119 aa9.95□□□□□ -0.82
SHMT2-230ENST00000557427 JTBO76095 146 aa9.95□□□□□ -0.82
SHMT2-230ENST00000557427 RBP4P02753 201 aa9.95□□□□□ -0.82
SHMT2-230ENST00000557427 NHLRC4P0CG21 123 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-230ENST00000557427 CGB3P0DN86 165 aa9.95□□□□□ -0.82
SHMT2-230ENST00000557427 CGB7P0DN87 165 aa9.95□□□□□ -0.82
SHMT2-230ENST00000557427 CATR1Q13166 79 aa9.95□□□□□ -0.82
SHMT2-230ENST00000557427 HABP2Q14520 560 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-230ENST00000557427 ZNF585BQ52M93 769 aa9.95□□□□□ -0.82
SHMT2-230ENST00000557427 TOR2AQ5JU69 321 aa9.95□□□□□ -0.82
SHMT2-230ENST00000557427 FAM74A1Q5RGS3 127 aa9.95□□□□□ -0.82
SHMT2-230ENST00000557427 LDLRAD2Q5SZI1 272 aa9.95□□□□□ -0.82
SHMT2-230ENST00000557427 ZNF66Q6ZN08 573 aa9.95□□□□□ -0.82
SHMT2-230ENST00000557427 ABHD12Q8N2K0 398 aa9.95□□□□□ -0.82
SHMT2-230ENST00000557427 OR11H6Q8NGC7 330 aa9.95□□□□□ -0.82
SHMT2-230ENST00000557427 OR4C13Q8NGP0 309 aa9.95□□□□□ -0.82
SHMT2-230ENST00000557427 PIFOQ8TCI5 191 aa9.95□□□□□ -0.82
SHMT2-230ENST00000557427 RNF141Q8WVD5 230 aa9.95□□□□□ -0.82
SHMT2-230ENST00000557427 EDARADDQ8WWZ3 215 aa9.95□□□□□ -0.82
SHMT2-230ENST00000557427 GPR146Q96CH1 333 aa9.95□□□□□ -0.82
SHMT2-230ENST00000557427 MALSU1Q96EH3 234 aa9.95□□□□□ -0.82
SHMT2-230ENST00000557427 YPEL2Q96QA6 119 aa9.95□□□□□ -0.82
SHMT2-230ENST00000557427 OR2D2Q9H210 308 aa9.95□□□□□ -0.82
SHMT2-230ENST00000557427 ARV1Q9H2C2 271 aa9.95□□□□□ -0.82
SHMT2-230ENST00000557427 TMEM133Q9H2Q1 129 aa9.95□□□□□ -0.82
SHMT2-230ENST00000557427 OR2S2Q9NQN1 319 aa9.95□□□□□ -0.82
SHMT2-230ENST00000557427 IGHV2-26A0A0B4J1V2 119 aa9.94□□□□□ -0.82
SHMT2-230ENST00000557427 ODF3BA8MYP8 253 aa9.94□□□□□ -0.82
SHMT2-230ENST00000557427 I3L521 148 aa9.94□□□□□ -0.82
SHMT2-230ENST00000557427 ITGB1BP1O14713 200 aa9.94□□□□□ -0.82
SHMT2-230ENST00000557427 IGKV1-39P01597 117 aa9.94□□□□□ -0.82
SHMT2-230ENST00000557427 IGKV1D-39P04432 117 aa9.94□□□□□ -0.82
SHMT2-230ENST00000557427 FGF2P09038 288 aa9.94□□□□□ -0.82
SHMT2-230ENST00000557427 SSTR5P35346 364 aa9.94□□□□□ -0.82
SHMT2-230ENST00000557427 PPP1CCP36873 323 aaKnown RBP9.94□□□□□ -0.82
SHMT2-230ENST00000557427 TMEM30BQ3MIR4 351 aa9.94□□□□□ -0.82
SHMT2-230ENST00000557427 RPL7L1Q6DKI1 246 aaKnown RBP9.94□□□□□ -0.82
SHMT2-230ENST00000557427 OR2C3Q8N628 320 aa9.94□□□□□ -0.82
SHMT2-230ENST00000557427 UBAC2Q8NBM4 344 aa9.94□□□□□ -0.82
SHMT2-230ENST00000557427 MUC7Q8TAX7 377 aa9.94□□□□□ -0.82
SHMT2-230ENST00000557427 CORO2AQ92828 525 aa9.94□□□□□ -0.82
SHMT2-230ENST00000557427 CLEC7AQ9BXN2 247 aa9.94□□□□□ -0.82
SHMT2-230ENST00000557427 SLC25A31Q9H0C2 315 aa9.94□□□□□ -0.82
SHMT2-230ENST00000557427 GAL3ST2Q9H3Q3 398 aa9.94□□□□□ -0.82
SHMT2-230ENST00000557427 TBL2Q9Y4P3 447 aaKnown RBP9.94□□□□□ -0.82
SHMT2-230ENST00000557427 HERC2O95714 4834 aa9.94□□□□□ -0.82
SHMT2-230ENST00000557427 HUWE1Q7Z6Z7 4374 aaKnown RBP9.93□□□□□ -0.82
SHMT2-230ENST00000557427 BORCS7-ASMTA0A0B4J1R7 106 aa9.93□□□□□ -0.82
SHMT2-230ENST00000557427 A0A0G2JRQ6 117 aa9.93□□□□□ -0.82
SHMT2-230ENST00000557427 CHST1O43916 411 aa9.93□□□□□ -0.82
SHMT2-230ENST00000557427 ATG12O94817 140 aa9.93□□□□□ -0.82
SHMT2-230ENST00000557427 NFYBP25208 207 aa9.93□□□□□ -0.82
SHMT2-230ENST00000557427 POLR2GP62487 172 aaKnown RBP eCLIP9.93□□□□□ -0.82
SHMT2-230ENST00000557427 VAMP2P63027 116 aa9.93□□□□□ -0.82
SHMT2-230ENST00000557427 CXorf66Q5JRM2 361 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-230ENST00000557427 TMEM219Q86XT9 240 aa9.93□□□□□ -0.82
SHMT2-230ENST00000557427 RNASE11Q8TAA1 199 aaKnown RBP9.93□□□□□ -0.82
SHMT2-230ENST00000557427 RFESDQ8TAC1 157 aa9.93□□□□□ -0.82
SHMT2-230ENST00000557427 TMED6Q8WW62 240 aa9.93□□□□□ -0.82
SHMT2-230ENST00000557427 SAT2Q96F10 170 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-230ENST00000557427 C5orf30Q96GV9 206 aa9.93□□□□□ -0.82
SHMT2-230ENST00000557427 HSD17B10Q99714 261 aaKnown RBP9.93□□□□□ -0.82
SHMT2-230ENST00000557427 ZNF702PQ9H963 129 aa9.93□□□□□ -0.82
SHMT2-230ENST00000557427 LYRM2Q9NU23 88 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-230ENST00000557427 COA4Q9NYJ1 87 aa9.93□□□□□ -0.82
SHMT2-230ENST00000557427 TAS2R3Q9NYW6 316 aa9.93□□□□□ -0.82
SHMT2-230ENST00000557427 GAB2Q9UQC2 676 aa9.93□□□□□ -0.82
SHMT2-230ENST00000557427 STARD9Q9P2P6 4700 aa9.92□□□□□ -0.82
SHMT2-230ENST00000557427 A0A1W2PRX2 142 aa9.92□□□□□ -0.82
SHMT2-230ENST00000557427 NUDT19A8MXV4 375 aa9.92□□□□□ -0.82
SHMT2-230ENST00000557427 FAM90A26D6RGX4 464 aa9.92□□□□□ -0.82
SHMT2-230ENST00000557427 WRBO00258 174 aa9.92□□□□□ -0.82
SHMT2-230ENST00000557427 TOR1AO14656 332 aa9.92□□□□□ -0.82
SHMT2-230ENST00000557427 SHOXO15266 292 aa9.92□□□□□ -0.82
SHMT2-230ENST00000557427 IGKV1-5P01602 117 aa9.92□□□□□ -0.82
SHMT2-230ENST00000557427 IGHV3-7P01780 117 aa9.92□□□□□ -0.82
SHMT2-230ENST00000557427 HTR1DP28221 377 aa9.92□□□□□ -0.82
SHMT2-230ENST00000557427 LPAR6P43657 344 aa9.92□□□□□ -0.82
SHMT2-230ENST00000557427 AKR1C2P52895 323 aa9.92□□□□□ -0.82
SHMT2-230ENST00000557427 EWSR1Q01844 656 aaKnown RBP eCLIP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms