RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 GPX2P18283 190 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 CXCL3P19876 107 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 SNCAP37840 140 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 GABRA2P47869 451 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 TFPI2P48307 235 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 SOX2P48431 317 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 PJVKQ0ZLH3 352 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 MEF2DQ14814 521 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 RGNQ15493 299 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 TMEM183BQ1AE95 376 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 TMEM42Q69YG0 159 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 PRSS54Q6PEW0 395 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 SLC25A47Q6Q0C1 308 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 HEPN1Q6WQI6 88 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 ASCL4Q6XD76 172 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 GTF2H5Q6ZYL4 71 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 SLC36A1Q7Z2H8 476 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 BCDIN3DQ7Z5W3 292 aaKnown RBP3.93□□□□□ -1.78
ATXN3-247ENST00000557311 OR5AS1Q8N127 324 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 GBGT1Q8N5D6 347 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 NOXO1Q8NFA2 376 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 OR5A2Q8NGI9 324 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 OR56B4Q8NH76 319 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 OSR1Q8TAX0 266 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-247ENST00000557311 CNIH3Q8TBE1 160 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 MAL2Q969L2 176 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 RPL36ALQ969Q0 106 aaKnown RBP3.93□□□□□ -1.78
ATXN3-247ENST00000557311 GPR146Q96CH1 333 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 CIB3Q96Q77 187 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-247ENST00000557311 MBOAT4Q96T53 435 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 PITX2Q99697 317 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 MCHR1Q99705 422 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 PSMG3Q9BT73 122 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-247ENST00000557311 FXYD6Q9H0Q3 95 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 SLC25A19Q9HC21 320 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 TMEM100Q9NV29 134 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 TRAPPC2LQ9UL33 140 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 TNFSF18Q9UNG2 199 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 OR51B2Q9Y5P1 312 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 U3KQK5 164 aa3.93□□□□□ -1.78
ATXN3-247ENST00000557311 NOTCH3Q9UM47 2321 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 NUP214P35658 2090 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-247ENST00000557311 IGKV1D-43A0A0B4J1Z2 117 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 TRAV38-1A0A0B4J264 116 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 IGHV3-64DA0A0J9YX35 117 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 C7orf77A4D0Y5 90 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 OR5B21A6NL26 309 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 ZNF705FA8MVS1 300 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-247ENST00000557311 ZNF670-ZNF695F2Z2N8 137 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 F5H5P2 479 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 J3QR89 54 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 TNFRSF11BO00300 401 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 NPFFO15130 113 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 ARPC2O15144 300 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 SPRY2O43597 315 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 HIST1H2BKO60814 126 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 DUS4LO95620 317 aaKnown RBP3.92□□□□□ -1.78
ATXN3-247ENST00000557311 HIST1H2BJP06899 126 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 CD14P08571 375 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 ZNF705DP0CH99 300 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-247ENST00000557311 ZNF705BP0CI00 300 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-247ENST00000557311 OR5H8P0DN80 308 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 CD28P10747 220 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 ZNF19P17023 458 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 FUT3P21217 361 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 HIST1H2BOP23527 126 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 HIST1H2BBP33778 126 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 HIST1H2BDP58876 126 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 TAS2R30P59541 319 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 SEC61GP60059 68 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 KRTAP10-11P60412 298 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 HIST1H2BCP62807 126 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 GNG3P63215 75 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 PAFAH1B2P68402 229 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 SMAGPQ0VAQ4 97 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 ST3GAL3Q11203 375 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 KLF9Q13886 244 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-247ENST00000557311 TAF13Q15543 124 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 TNXAQ16473 311 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 HIST2H2BEQ16778 126 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 TMEM128Q5BJH2 165 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-247ENST00000557311 FAHD1Q6P587 224 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 TEX38Q6PEX7 206 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 FOXL2NBQ6ZUU3 175 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 VMO1Q7Z5L0 202 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 OR8I2Q8N0Y5 310 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 FAM24BQ8N5W8 94 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 TCTEX1D1Q8N7M0 179 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 OR51G2Q8NGK0 314 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 OR4A4PQ8NGN8 299 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 NFKBIDQ8NI38 313 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 C15orf40Q8WUR7 153 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 HIST1H2BHQ93079 126 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 ISOC2Q96AB3 205 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 GALMQ96C23 342 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 HIST1H2BNQ99877 126 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 HIST1H2BMQ99879 126 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 WFDC6Q9BQY6 131 aa3.92□□□□□ -1.78
ATXN3-247ENST00000557311 NPFFR1Q9GZQ6 430 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms