RNA–Protein interactions for RNA: ENST00000557307.1

SYNE2-227, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 526 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-227ENST00000557307 Q9H521 79 aa8.21□□□□□ -1.1
SYNE2-227ENST00000557307 BET1LQ9NYM9 111 aa8.21□□□□□ -1.1
SYNE2-227ENST00000557307 MLXQ9UH92 298 aa8.21□□□□□ -1.1
SYNE2-227ENST00000557307 ANAPC10Q9UM13 185 aa8.21□□□□□ -1.1
SYNE2-227ENST00000557307 IGHV3-35A0A0C4DH35 117 aa8.2□□□□□ -1.1
SYNE2-227ENST00000557307 CREBL2O60519 120 aaPredicted RBP8.2□□□□□ -1.1
SYNE2-227ENST00000557307 SLC22A5O76082 557 aa8.2□□□□□ -1.1
SYNE2-227ENST00000557307 PMP2P02689 132 aa8.2□□□□□ -1.1
SYNE2-227ENST00000557307 EIF4EP06730 217 aaKnown RBP8.2□□□□□ -1.1
SYNE2-227ENST00000557307 LYL1P12980 280 aa8.2□□□□□ -1.1
SYNE2-227ENST00000557307 GNRHRP30968 328 aa8.2□□□□□ -1.1
SYNE2-227ENST00000557307 ARL3P36405 182 aa8.2□□□□□ -1.1
SYNE2-227ENST00000557307 RFX2P48378 723 aa8.2□□□□□ -1.1
SYNE2-227ENST00000557307 MFAP2P55001 183 aa8.2□□□□□ -1.1
SYNE2-227ENST00000557307 SCAND1P57086 179 aa8.2□□□□□ -1.1
SYNE2-227ENST00000557307 TAS2R20P59543 309 aa8.2□□□□□ -1.1
SYNE2-227ENST00000557307 RPL8P62917 257 aaKnown RBP8.2□□□□□ -1.1
SYNE2-227ENST00000557307 KLK9Q2XQG4 91 aa8.2□□□□□ -1.1
SYNE2-227ENST00000557307 GTSCR1Q86UQ5 136 aa8.2□□□□□ -1.1
SYNE2-227ENST00000557307 OR5AP2Q8NGF4 316 aa8.2□□□□□ -1.1
SYNE2-227ENST00000557307 SPATA25Q9BR10 227 aa8.2□□□□□ -1.1
SYNE2-227ENST00000557307 HIPK2Q9H2X6 1198 aa8.2□□□□□ -1.1
SYNE2-227ENST00000557307 TMEM140Q9NV12 185 aa8.2□□□□□ -1.1
SYNE2-227ENST00000557307 PEMTQ9UBM1 199 aa8.2□□□□□ -1.1
SYNE2-227ENST00000557307 KLK9Q9UKQ9 250 aa8.2□□□□□ -1.1
SYNE2-227ENST00000557307 CEPT1Q9Y6K0 416 aa8.2□□□□□ -1.1
SYNE2-227ENST00000557307 IGHV3-21A0A0B4J1V1 117 aa8.19□□□□□ -1.1
SYNE2-227ENST00000557307 DPPA5A6NC42 116 aa8.19□□□□□ -1.1
SYNE2-227ENST00000557307 DBX1A6NMT0 343 aa8.19□□□□□ -1.1
SYNE2-227ENST00000557307 UPK2O00526 184 aa8.19□□□□□ -1.1
SYNE2-227ENST00000557307 GGCTO75223 188 aaKnown RBP8.19□□□□□ -1.1
SYNE2-227ENST00000557307 RLN1P04808 185 aa8.19□□□□□ -1.1
SYNE2-227ENST00000557307 MAS1LP35410 378 aa8.19□□□□□ -1.1
SYNE2-227ENST00000557307 KIR2DS2P43631 304 aa8.19□□□□□ -1.1
SYNE2-227ENST00000557307 WT1-ASQ06250 92 aa8.19□□□□□ -1.1
SYNE2-227ENST00000557307 MSMO1Q15800 293 aa8.19□□□□□ -1.1
SYNE2-227ENST00000557307 POU2AF1Q16633 256 aa8.19□□□□□ -1.1
SYNE2-227ENST00000557307 TATDN3Q17R31 274 aa8.19□□□□□ -1.1
SYNE2-227ENST00000557307 TM4SF20Q53R12 229 aa8.19□□□□□ -1.1
SYNE2-227ENST00000557307 TMEM61Q8N0U2 210 aa8.19□□□□□ -1.1
SYNE2-227ENST00000557307 VSTM2AQ8TAG5 236 aa8.19□□□□□ -1.1
SYNE2-227ENST00000557307 DYNLRB2Q8TF09 96 aa8.19□□□□□ -1.1
SYNE2-227ENST00000557307 ZNF2Q9BSG1 426 aaPredicted RBP8.19□□□□□ -1.1
SYNE2-227ENST00000557307 SRD5A3Q9H8P0 318 aa8.19□□□□□ -1.1
SYNE2-227ENST00000557307 HRASLSQ9HDD0 168 aa8.19□□□□□ -1.1
SYNE2-227ENST00000557307 EHFQ9NZC4 300 aa8.19□□□□□ -1.1
SYNE2-227ENST00000557307 NSG2Q9Y328 171 aa8.19□□□□□ -1.1
SYNE2-227ENST00000557307 A0A0A6YYH2 397 aa8.18□□□□□ -1.1
SYNE2-227ENST00000557307 LCE6AA0A183 80 aa8.18□□□□□ -1.1
SYNE2-227ENST00000557307 A6NJ64 397 aa8.18□□□□□ -1.1
SYNE2-227ENST00000557307 F8W735 103 aaPredicted RBP8.18□□□□□ -1.1
SYNE2-227ENST00000557307 LGALS9O00182 355 aa8.18□□□□□ -1.1
SYNE2-227ENST00000557307 RBFOX2O43251 390 aaKnown RBP eCLIP8.18□□□□□ -1.1
SYNE2-227ENST00000557307 XRCC3O43542 346 aa8.18□□□□□ -1.1
SYNE2-227ENST00000557307 AIREO43918 545 aa8.18□□□□□ -1.1
SYNE2-227ENST00000557307 HRASP01112 189 aa8.18□□□□□ -1.1
SYNE2-227ENST00000557307 CBLN1P23435 193 aa8.18□□□□□ -1.1
SYNE2-227ENST00000557307 GPR183P32249 361 aa8.18□□□□□ -1.1
SYNE2-227ENST00000557307 TAS2R31P59538 309 aa8.18□□□□□ -1.1
SYNE2-227ENST00000557307 NCS1P62166 190 aa8.18□□□□□ -1.1
SYNE2-227ENST00000557307 GUCA2BQ16661 112 aa8.18□□□□□ -1.1
SYNE2-227ENST00000557307 ZNF585BQ52M93 769 aa8.18□□□□□ -1.1
SYNE2-227ENST00000557307 UBE2NLQ5JXB2 153 aa8.18□□□□□ -1.1
SYNE2-227ENST00000557307 AADACL3Q5VUY0 350 aa8.18□□□□□ -1.1
SYNE2-227ENST00000557307 BTNL8Q6UX41 500 aa8.18□□□□□ -1.1
SYNE2-227ENST00000557307 SLC25A42Q86VD7 318 aa8.18□□□□□ -1.1
SYNE2-227ENST00000557307 SAMD12Q8N8I0 201 aa8.18□□□□□ -1.1
SYNE2-227ENST00000557307 OR2K2Q8NGT1 345 aa8.18□□□□□ -1.1
SYNE2-227ENST00000557307 ZNF502Q8TBZ5 544 aa8.18□□□□□ -1.1
SYNE2-227ENST00000557307 GIMAP1Q8WWP7 306 aa8.18□□□□□ -1.1
SYNE2-227ENST00000557307 MOB3AQ96BX8 217 aa8.18□□□□□ -1.1
SYNE2-227ENST00000557307 ISOC1Q96CN7 298 aa8.18□□□□□ -1.1
SYNE2-227ENST00000557307 KCTD12Q96CX2 325 aaKnown RBP8.18□□□□□ -1.1
SYNE2-227ENST00000557307 TUBA4BQ9H853 241 aa8.18□□□□□ -1.1
SYNE2-227ENST00000557307 DIABLOQ9NR28 239 aa8.18□□□□□ -1.1
SYNE2-227ENST00000557307 IGHV3OR16-8A0A075B7F1 116 aa8.17□□□□□ -1.1
SYNE2-227ENST00000557307 TEX50A0A1B0GTY4 177 aa8.17□□□□□ -1.1
SYNE2-227ENST00000557307 ZNF320A2RRD8 509 aa8.17□□□□□ -1.1
SYNE2-227ENST00000557307 A8MWP6 167 aa8.17□□□□□ -1.1
SYNE2-227ENST00000557307 OR11H12B2RN74 326 aa8.17□□□□□ -1.1
SYNE2-227ENST00000557307 PGLYRP1O75594 196 aaPredicted RBP8.17□□□□□ -1.1
SYNE2-227ENST00000557307 SCAF4O95104 1147 aaKnown RBP8.17□□□□□ -1.1
SYNE2-227ENST00000557307 HPRT1P00492 218 aa8.17□□□□□ -1.1
SYNE2-227ENST00000557307 CLEC3BP05452 202 aa8.17□□□□□ -1.1
SYNE2-227ENST00000557307 NQO2P16083 231 aa8.17□□□□□ -1.1
SYNE2-227ENST00000557307 NAT1P18440 290 aa8.17□□□□□ -1.1
SYNE2-227ENST00000557307 GPHB5Q86YW7 130 aa8.17□□□□□ -1.1
SYNE2-227ENST00000557307 LYSMD2Q8IV50 215 aa8.17□□□□□ -1.1
SYNE2-227ENST00000557307 UXS1Q8NBZ7 420 aa8.17□□□□□ -1.1
SYNE2-227ENST00000557307 OR4A5Q8NH83 315 aa8.17□□□□□ -1.1
SYNE2-227ENST00000557307 FCAMRQ8WWV6 532 aa8.17□□□□□ -1.1
SYNE2-227ENST00000557307 EEF1AKMT3Q96AZ1 226 aa8.17□□□□□ -1.1
SYNE2-227ENST00000557307 PALMDQ9NP74 551 aa8.17□□□□□ -1.1
SYNE2-227ENST00000557307 IFT46Q9NQC8 304 aa8.17□□□□□ -1.1
SYNE2-227ENST00000557307 MARCH11A6NNE9 402 aa8.16□□□□□ -1.1
SYNE2-227ENST00000557307 TPPPO94811 219 aa8.16□□□□□ -1.1
SYNE2-227ENST00000557307 IGKV1-39P01597 117 aa8.16□□□□□ -1.1
SYNE2-227ENST00000557307 IGKV1D-39P04432 117 aa8.16□□□□□ -1.1
SYNE2-227ENST00000557307 DEFA4P12838 97 aa8.16□□□□□ -1.1
SYNE2-227ENST00000557307 HLA-DMAP28067 261 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms