RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 RPL11P62913 178 aaKnown RBP8.78□□□□□ -1
PSEN1-220ENST00000557037 ICAM4Q14773 271 aa8.78□□□□□ -1
PSEN1-220ENST00000557037 ACTL10Q5JWF8 245 aa8.78□□□□□ -1
PSEN1-220ENST00000557037 FAM222AQ5U5X8 452 aa8.78□□□□□ -1
PSEN1-220ENST00000557037 UBE2UQ5VVX9 321 aa8.78□□□□□ -1
PSEN1-220ENST00000557037 RPL22L1Q6P5R6 122 aaKnown RBP8.78□□□□□ -1
PSEN1-220ENST00000557037 SPATA24Q86W54 205 aa8.78□□□□□ -1
PSEN1-220ENST00000557037 AQP12AQ8IXF9 295 aa8.78□□□□□ -1
PSEN1-220ENST00000557037 ARHGAP24Q8N264 748 aa8.78□□□□□ -1
PSEN1-220ENST00000557037 LILRB2Q8N423 598 aa8.78□□□□□ -1
PSEN1-220ENST00000557037 UBAC2Q8NBM4 344 aa8.78□□□□□ -1
PSEN1-220ENST00000557037 TMEM167AQ8TBQ9 72 aa8.78□□□□□ -1
PSEN1-220ENST00000557037 GGHQ92820 318 aa8.78□□□□□ -1
PSEN1-220ENST00000557037 ZNF414Q96IQ9 312 aa8.78□□□□□ -1
PSEN1-220ENST00000557037 MYCBPQ99417 103 aaPredicted RBP8.78□□□□□ -1
PSEN1-220ENST00000557037 RIMS4Q9H426 269 aaPredicted RBP8.78□□□□□ -1
PSEN1-220ENST00000557037 KCNK15Q9H427 330 aa8.78□□□□□ -1
PSEN1-220ENST00000557037 XCL2Q9UBD3 114 aa8.78□□□□□ -1
PSEN1-220ENST00000557037 RABAC1Q9UI14 185 aa8.78□□□□□ -1
PSEN1-220ENST00000557037 RBM7Q9Y580 266 aaKnown RBP8.78□□□□□ -1
PSEN1-220ENST00000557037 LRP1Q07954 4544 aaKnown RBP8.78□□□□□ -1
PSEN1-220ENST00000557037 IGHV3-66A0A0C4DH42 116 aa8.77□□□□□ -1.01
PSEN1-220ENST00000557037 CGB1A6NKQ9 187 aa8.77□□□□□ -1.01
PSEN1-220ENST00000557037 G3V2T6 193 aa8.77□□□□□ -1.01
PSEN1-220ENST00000557037 ARFRP1Q13795 201 aa8.77□□□□□ -1.01
PSEN1-220ENST00000557037 IGSF11Q5DX21 431 aa8.77□□□□□ -1.01
PSEN1-220ENST00000557037 SPSB3Q6PJ21 355 aa8.77□□□□□ -1.01
PSEN1-220ENST00000557037 VN1R17PQ8TDU5 208 aa8.77□□□□□ -1.01
PSEN1-220ENST00000557037 FAM107BQ9H098 131 aa8.77□□□□□ -1.01
PSEN1-220ENST00000557037 PGPEP1Q9NXJ5 209 aa8.77□□□□□ -1.01
PSEN1-220ENST00000557037 DKK2Q9UBU2 259 aa8.77□□□□□ -1.01
PSEN1-220ENST00000557037 MGAT4AQ9UM21 535 aa8.77□□□□□ -1.01
PSEN1-220ENST00000557037 TRBV5-5A0A0J9YX44 114 aa8.76□□□□□ -1.01
PSEN1-220ENST00000557037 TRDCB7Z8K6 153 aa8.76□□□□□ -1.01
PSEN1-220ENST00000557037 SRMP19623 302 aa8.76□□□□□ -1.01
PSEN1-220ENST00000557037 OR2B8PP59922 312 aa8.76□□□□□ -1.01
PSEN1-220ENST00000557037 ATP6AP1Q15904 470 aa8.76□□□□□ -1.01
PSEN1-220ENST00000557037 ST8SIA2Q92186 375 aa8.76□□□□□ -1.01
PSEN1-220ENST00000557037 SRSF8Q9BRL6 282 aaKnown RBP8.76□□□□□ -1.01
PSEN1-220ENST00000557037 TMEM59Q9BXS4 323 aa8.76□□□□□ -1.01
PSEN1-220ENST00000557037 THYN1Q9P016 225 aa8.76□□□□□ -1.01
PSEN1-220ENST00000557037 LINC00588Q9Y4M8 146 aa8.76□□□□□ -1.01
PSEN1-220ENST00000557037 TRAV14DV4A0A0A6YYC5 116 aa8.75□□□□□ -1.01
PSEN1-220ENST00000557037 A0A0A6YYD4 124 aa8.75□□□□□ -1.01
PSEN1-220ENST00000557037 RPS10-NUDT3A0A1W2PQS6 291 aa8.75□□□□□ -1.01
PSEN1-220ENST00000557037 IGLC7A0M8Q6 106 aa8.75□□□□□ -1.01
PSEN1-220ENST00000557037 ST8SIA3O43173 380 aa8.75□□□□□ -1.01
PSEN1-220ENST00000557037 NUDT3O95989 172 aa8.75□□□□□ -1.01
PSEN1-220ENST00000557037 ZNF688P0C7X2 276 aa8.75□□□□□ -1.01
PSEN1-220ENST00000557037 HOXB6P17509 224 aaKnown RBP8.75□□□□□ -1.01
PSEN1-220ENST00000557037 SERPINB10P48595 397 aa8.75□□□□□ -1.01
PSEN1-220ENST00000557037 Q56UQ5 140 aa8.75□□□□□ -1.01
PSEN1-220ENST00000557037 SLC25A24Q6NUK1 477 aa8.75□□□□□ -1.01
PSEN1-220ENST00000557037 PUSL1Q8N0Z8 303 aaKnown RBP8.75□□□□□ -1.01
PSEN1-220ENST00000557037 OR10J5Q8NHC4 309 aa8.75□□□□□ -1.01
PSEN1-220ENST00000557037 GABARAPL3Q9BY60 117 aa8.75□□□□□ -1.01
PSEN1-220ENST00000557037 AMBNQ9NP70 447 aa8.75□□□□□ -1.01
PSEN1-220ENST00000557037 C12orf4Q9NQ89 552 aa8.75□□□□□ -1.01
PSEN1-220ENST00000557037 C21orf62Q9NYP8 219 aa8.75□□□□□ -1.01
PSEN1-220ENST00000557037 TMEM189A5PLL7 270 aa8.74□□□□□ -1.01
PSEN1-220ENST00000557037 J3QRK9 145 aa8.74□□□□□ -1.01
PSEN1-220ENST00000557037 SOCS1O15524 211 aa8.74□□□□□ -1.01
PSEN1-220ENST00000557037 FABP7O15540 132 aa8.74□□□□□ -1.01
PSEN1-220ENST00000557037 DCTN3O75935 186 aa8.74□□□□□ -1.01
PSEN1-220ENST00000557037 APOHP02749 345 aaPredicted RBP8.74□□□□□ -1.01
PSEN1-220ENST00000557037 HLA-GP17693 338 aa8.74□□□□□ -1.01
PSEN1-220ENST00000557037 CCL18P55774 89 aa8.74□□□□□ -1.01
PSEN1-220ENST00000557037 RPL30P62888 115 aaKnown RBP8.74□□□□□ -1.01
PSEN1-220ENST00000557037 RPL8P62917 257 aaKnown RBP8.74□□□□□ -1.01
PSEN1-220ENST00000557037 Q499Y3 187 aa8.74□□□□□ -1.01
PSEN1-220ENST00000557037 CDH26Q8IXH8 852 aa8.74□□□□□ -1.01
PSEN1-220ENST00000557037 DUSP18Q8NEJ0 188 aa8.74□□□□□ -1.01
PSEN1-220ENST00000557037 VSTM2AQ8TAG5 236 aa8.74□□□□□ -1.01
PSEN1-220ENST00000557037 SCARB1Q8WTV0 552 aa8.74□□□□□ -1.01
PSEN1-220ENST00000557037 DGCR14Q96DF8 476 aaKnown RBP8.74□□□□□ -1.01
PSEN1-220ENST00000557037 IGHV3OR16-12A0A075B7B8 117 aa8.73□□□□□ -1.01
PSEN1-220ENST00000557037 IFNA5P01569 189 aa8.73□□□□□ -1.01
PSEN1-220ENST00000557037 EIF4EP06730 217 aaKnown RBP8.73□□□□□ -1.01
PSEN1-220ENST00000557037 CTSGP08311 255 aa8.73□□□□□ -1.01
PSEN1-220ENST00000557037 LIMS3P0CW19 117 aa8.73□□□□□ -1.01
PSEN1-220ENST00000557037 LIMS4P0CW20 117 aa8.73□□□□□ -1.01
PSEN1-220ENST00000557037 RPS11P62280 158 aaKnown RBP eCLIP8.73□□□□□ -1.01
PSEN1-220ENST00000557037 UNC119Q13432 240 aa8.73□□□□□ -1.01
PSEN1-220ENST00000557037 CCDC58Q4VC31 144 aa8.73□□□□□ -1.01
PSEN1-220ENST00000557037 MEDAGQ5VYS4 303 aa8.73□□□□□ -1.01
PSEN1-220ENST00000557037 GSG1LQ6UXU4 331 aa8.73□□□□□ -1.01
PSEN1-220ENST00000557037 KCTD9Q7L273 389 aa8.73□□□□□ -1.01
PSEN1-220ENST00000557037 STXBP6Q8NFX7 210 aa8.73□□□□□ -1.01
PSEN1-220ENST00000557037 OR10W1Q8NGF6 305 aa8.73□□□□□ -1.01
PSEN1-220ENST00000557037 OR4A4PQ8NGN8 299 aa8.73□□□□□ -1.01
PSEN1-220ENST00000557037 TRUB1Q8WWH5 349 aaKnown RBP8.73□□□□□ -1.01
PSEN1-220ENST00000557037 UQCC2Q9BRT2 126 aa8.73□□□□□ -1.01
PSEN1-220ENST00000557037 TM2D1Q9BX74 207 aa8.73□□□□□ -1.01
PSEN1-220ENST00000557037 GABARAPL1Q9H0R8 117 aa8.73□□□□□ -1.01
PSEN1-220ENST00000557037 Q9H8V8 135 aa8.73□□□□□ -1.01
PSEN1-220ENST00000557037 GHRLQ9UBU3 117 aa8.73□□□□□ -1.01
PSEN1-220ENST00000557037 TRBV6-7A0A0A0MS04 114 aa8.72□□□□□ -1.01
PSEN1-220ENST00000557037 TRAV2A0A0B4J234 112 aa8.72□□□□□ -1.01
PSEN1-220ENST00000557037 SNTNA6NMZ2 147 aa8.72□□□□□ -1.01
PSEN1-220ENST00000557037 CELP19835 753 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms