RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 LINC00588Q9Y4M8 146 aa4□□□□□ -1.77
ATXN3-245ENST00000556958 PEX16Q9Y5Y5 336 aa4□□□□□ -1.77
ATXN3-245ENST00000556958 S4R3C0 116 aa4□□□□□ -1.77
ATXN3-245ENST00000556958 TCRBV3S1A0A5B6 114 aa3.99□□□□□ -1.77
ATXN3-245ENST00000556958 CCDC182A6NF36 153 aa3.99□□□□□ -1.77
ATXN3-245ENST00000556958 SAC3D1A6NKF1 404 aa3.99□□□□□ -1.77
ATXN3-245ENST00000556958 C15orf62A8K5M9 175 aa3.99□□□□□ -1.77
ATXN3-245ENST00000556958 ANKRD65E5RJM6 399 aa3.99□□□□□ -1.77
ATXN3-245ENST00000556958 F5H697 171 aa3.99□□□□□ -1.77
ATXN3-245ENST00000556958 GAS8-AS1O95177 125 aa3.99□□□□□ -1.77
ATXN3-245ENST00000556958 OR2T7P0C7T2 308 aa3.99□□□□□ -1.77
ATXN3-245ENST00000556958 RRASP10301 218 aa3.99□□□□□ -1.77
ATXN3-245ENST00000556958 ANXA8P13928 327 aa3.99□□□□□ -1.77
ATXN3-245ENST00000556958 RAB3AP20336 220 aa3.99□□□□□ -1.77
ATXN3-245ENST00000556958 GPR183P32249 361 aa3.99□□□□□ -1.77
ATXN3-245ENST00000556958 GTF2A1P52655 376 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-245ENST00000556958 UBE2KP61086 200 aa3.99□□□□□ -1.77
ATXN3-245ENST00000556958 DAD1P61803 113 aa3.99□□□□□ -1.77
ATXN3-245ENST00000556958 HAMPP81172 84 aa3.99□□□□□ -1.77
ATXN3-245ENST00000556958 CDK5Q00535 292 aa3.99□□□□□ -1.77
ATXN3-245ENST00000556958 GPR176Q14439 515 aa3.99□□□□□ -1.77
ATXN3-245ENST00000556958 IRF3Q14653 427 aa3.99□□□□□ -1.77
ATXN3-245ENST00000556958 RTL8BQ17RB0 113 aa3.99□□□□□ -1.77
ATXN3-245ENST00000556958 FAM222AQ5U5X8 452 aa3.99□□□□□ -1.77
ATXN3-245ENST00000556958 RAB12Q6IQ22 244 aa3.99□□□□□ -1.77
ATXN3-245ENST00000556958 SPSB3Q6PJ21 355 aa3.99□□□□□ -1.77
ATXN3-245ENST00000556958 SSX7Q7RTT5 188 aa3.99□□□□□ -1.77
ATXN3-245ENST00000556958 FAM220AQ7Z4H9 259 aa3.99□□□□□ -1.77
ATXN3-245ENST00000556958 TRPT1Q86TN4 253 aaKnown RBP3.99□□□□□ -1.77
ATXN3-245ENST00000556958 MMD2Q8IY49 270 aa3.99□□□□□ -1.77
ATXN3-245ENST00000556958 DUSP18Q8NEJ0 188 aa3.99□□□□□ -1.77
ATXN3-245ENST00000556958 AGMATQ9BSE5 352 aa3.99□□□□□ -1.77
ATXN3-245ENST00000556958 TVP23BQ9NYZ1 205 aa3.99□□□□□ -1.77
ATXN3-245ENST00000556958 THYN1Q9P016 225 aa3.99□□□□□ -1.77
ATXN3-245ENST00000556958 DKK2Q9UBU2 259 aa3.99□□□□□ -1.77
ATXN3-245ENST00000556958 ORC6Q9Y5N6 252 aa3.99□□□□□ -1.77
ATXN3-245ENST00000556958 TNFRSF18Q9Y5U5 241 aa3.99□□□□□ -1.77
ATXN3-245ENST00000556958 LRP1Q07954 4544 aaKnown RBP3.99□□□□□ -1.77
ATXN3-245ENST00000556958 FAT4Q6V0I7 4981 aa3.98□□□□□ -1.77
ATXN3-245ENST00000556958 TRGV11A0A075B6L2 103 aa3.98□□□□□ -1.77
ATXN3-245ENST00000556958 A0A087WWL8 130 aa3.98□□□□□ -1.77
ATXN3-245ENST00000556958 TRAV2A0A0B4J234 112 aa3.98□□□□□ -1.77
ATXN3-245ENST00000556958 SRRM4A7MD48 611 aaKnown RBP3.98□□□□□ -1.77
ATXN3-245ENST00000556958 M0R1X1 148 aa3.98□□□□□ -1.77
ATXN3-245ENST00000556958 GABRPO00591 440 aa3.98□□□□□ -1.77
ATXN3-245ENST00000556958 CHEK1O14757 476 aa3.98□□□□□ -1.77
ATXN3-245ENST00000556958 CYB5BO43169 146 aa3.98□□□□□ -1.77
ATXN3-245ENST00000556958 SC5DO75845 299 aa3.98□□□□□ -1.77
ATXN3-245ENST00000556958 CDRT1O95170 752 aa3.98□□□□□ -1.77
ATXN3-245ENST00000556958 CRYGCP07315 174 aa3.98□□□□□ -1.77
ATXN3-245ENST00000556958 FCGR1AP12314 374 aa3.98□□□□□ -1.77
ATXN3-245ENST00000556958 HOXB6P17509 224 aaKnown RBP3.98□□□□□ -1.77
ATXN3-245ENST00000556958 SERPINA2P20848 420 aa3.98□□□□□ -1.77
ATXN3-245ENST00000556958 ZBTB25P24278 435 aa3.98□□□□□ -1.77
ATXN3-245ENST00000556958 PTBP1P26599 531 aaKnown RBP eCLIP3.98□□□□□ -1.774e-18■■■■■ 40.6
ATXN3-245ENST00000556958 ALDH3B2P48448 385 aa3.98□□□□□ -1.77
ATXN3-245ENST00000556958 DAPP51397 102 aa3.98□□□□□ -1.77
ATXN3-245ENST00000556958 SNRPGP62308 76 aaKnown RBP3.98□□□□□ -1.77
ATXN3-245ENST00000556958 KLK9Q2XQG4 91 aa3.98□□□□□ -1.77
ATXN3-245ENST00000556958 ZIK1Q3SY52 487 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-245ENST00000556958 LPCAT4Q643R3 524 aa3.98□□□□□ -1.77
ATXN3-245ENST00000556958 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-245ENST00000556958 NFE4Q86UQ8 179 aa3.98□□□□□ -1.77
ATXN3-245ENST00000556958 PARP16Q8N5Y8 322 aa3.98□□□□□ -1.77
ATXN3-245ENST00000556958 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-245ENST00000556958 TMEM116Q8NCL8 245 aa3.98□□□□□ -1.77
ATXN3-245ENST00000556958 OR51A2Q8NGJ7 313 aa3.98□□□□□ -1.77
ATXN3-245ENST00000556958 OR2G2Q8NGZ5 317 aa3.98□□□□□ -1.77
ATXN3-245ENST00000556958 TBX5Q99593 518 aa3.98□□□□□ -1.77
ATXN3-245ENST00000556958 UQCC2Q9BRT2 126 aa3.98□□□□□ -1.77
ATXN3-245ENST00000556958 RIBC2Q9H4K1 309 aa3.98□□□□□ -1.77
ATXN3-245ENST00000556958 ZNF586Q9NXT0 402 aa3.98□□□□□ -1.77
ATXN3-245ENST00000556958 KLK9Q9UKQ9 250 aa3.98□□□□□ -1.77
ATXN3-245ENST00000556958 RFNGQ9Y644 331 aa3.98□□□□□ -1.77
ATXN3-245ENST00000556958 PKHD1L1Q86WI1 4243 aa3.98□□□□□ -1.77
ATXN3-245ENST00000556958 IGHV7-4-1A0A0J9YVY3 117 aa3.97□□□□□ -1.77
ATXN3-245ENST00000556958 A0A0U1RQV1 116 aa3.97□□□□□ -1.77
ATXN3-245ENST00000556958 A0A1W2PQL4 384 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-245ENST00000556958 HMX3A6NHT5 357 aa3.97□□□□□ -1.77
ATXN3-245ENST00000556958 TRIAP1O43715 76 aa3.97□□□□□ -1.77
ATXN3-245ENST00000556958 PROP1O75360 226 aa3.97□□□□□ -1.77
ATXN3-245ENST00000556958 C1QBP02746 253 aa3.97□□□□□ -1.77
ATXN3-245ENST00000556958 EIF4EP06730 217 aaKnown RBP3.97□□□□□ -1.77
ATXN3-245ENST00000556958 C4BPBP20851 252 aa3.97□□□□□ -1.77
ATXN3-245ENST00000556958 FGF9P31371 208 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-245ENST00000556958 ATP6V1E1P36543 226 aa3.97□□□□□ -1.77
ATXN3-245ENST00000556958 CEACAM6P40199 344 aa3.97□□□□□ -1.77
ATXN3-245ENST00000556958 PSMD7P51665 324 aa3.97□□□□□ -1.77
ATXN3-245ENST00000556958 CCR9P51686 369 aa3.97□□□□□ -1.77
ATXN3-245ENST00000556958 LINC00315P59091 139 aa3.97□□□□□ -1.77
ATXN3-245ENST00000556958 GK3PQ14409 553 aa3.97□□□□□ -1.77
ATXN3-245ENST00000556958 HMGN3Q15651 99 aa3.97□□□□□ -1.77
ATXN3-245ENST00000556958 CEACAM19Q7Z692 300 aa3.97□□□□□ -1.77
ATXN3-245ENST00000556958 ZNF502Q8TBZ5 544 aa3.97□□□□□ -1.77
ATXN3-245ENST00000556958 NRBF2Q96F24 287 aa3.97□□□□□ -1.77
ATXN3-245ENST00000556958 BSCL2Q96G97 398 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-245ENST00000556958 CENPNQ96H22 339 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-245ENST00000556958 IL4I1Q96RQ9 567 aa3.97□□□□□ -1.77
ATXN3-245ENST00000556958 ATP6V0BQ99437 205 aa3.97□□□□□ -1.77
ATXN3-245ENST00000556958 CIB1Q99828 191 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms