RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 TRAV3A0A0B4J244 114 aa7.71□□□□□ -1.18
TMEM260-213ENST00000556929 A0A0G2JRQ6 117 aa7.71□□□□□ -1.18
TMEM260-213ENST00000556929 C13orf42A0A1B0GVH6 325 aa7.71□□□□□ -1.18
TMEM260-213ENST00000556929 C5orf51A6NDU8 294 aa7.71□□□□□ -1.18
TMEM260-213ENST00000556929 FAM25EA8MYX2 175 aa7.71□□□□□ -1.18
TMEM260-213ENST00000556929 FCN1O00602 326 aa7.71□□□□□ -1.18
TMEM260-213ENST00000556929 GOSR2O14653 212 aa7.71□□□□□ -1.18
TMEM260-213ENST00000556929 IGHG2P01859 326 aa7.71□□□□□ -1.18
TMEM260-213ENST00000556929 AMY1AP04745 511 aa7.71□□□□□ -1.18
TMEM260-213ENST00000556929 HLA-GP17693 338 aa7.71□□□□□ -1.18
TMEM260-213ENST00000556929 GNB1P62873 340 aa7.71□□□□□ -1.18
TMEM260-213ENST00000556929 BLCAPP62952 87 aa7.71□□□□□ -1.18
TMEM260-213ENST00000556929 FXYD3Q14802 87 aa7.71□□□□□ -1.18
TMEM260-213ENST00000556929 Q6ZNX1 250 aa7.71□□□□□ -1.18
TMEM260-213ENST00000556929 SLC35E3Q7Z769 313 aa7.71□□□□□ -1.18
TMEM260-213ENST00000556929 ZNF429Q86V71 674 aa7.71□□□□□ -1.18
TMEM260-213ENST00000556929 FOXRED2Q8IWF2 684 aa7.71□□□□□ -1.18
TMEM260-213ENST00000556929 ABHD5Q8WTS1 349 aa7.71□□□□□ -1.18
TMEM260-213ENST00000556929 ARPC1AQ92747 370 aa7.71□□□□□ -1.18
TMEM260-213ENST00000556929 MGAT4CQ9UBM8 478 aa7.71□□□□□ -1.18
TMEM260-213ENST00000556929 FOXA2Q9Y261 457 aaPredicted RBP7.71□□□□□ -1.18
TMEM260-213ENST00000556929 ZNF257Q9Y2Q1 563 aa7.71□□□□□ -1.18
TMEM260-213ENST00000556929 NSG2Q9Y328 171 aa7.71□□□□□ -1.18
TMEM260-213ENST00000556929 OR51B2Q9Y5P1 312 aa7.71□□□□□ -1.18
TMEM260-213ENST00000556929 IGHV7-81A0A0B4J1V7 117 aa7.7□□□□□ -1.18
TMEM260-213ENST00000556929 TEX50A0A1B0GTY4 177 aa7.7□□□□□ -1.18
TMEM260-213ENST00000556929 SH2D7A6NKC9 451 aaPredicted RBP7.7□□□□□ -1.18
TMEM260-213ENST00000556929 CCSO14618 274 aa7.7□□□□□ -1.18
TMEM260-213ENST00000556929 IFNA17P01571 189 aa7.7□□□□□ -1.18
TMEM260-213ENST00000556929 RPL27AP46776 148 aaKnown RBP7.7□□□□□ -1.18
TMEM260-213ENST00000556929 COMPP49747 757 aaPredicted RBP7.7□□□□□ -1.18
TMEM260-213ENST00000556929 OR2B8PP59922 312 aa7.7□□□□□ -1.18
TMEM260-213ENST00000556929 HSPE1P61604 102 aaKnown RBP7.7□□□□□ -1.18
TMEM260-213ENST00000556929 RRAS2P62070 204 aaPredicted RBP7.7□□□□□ -1.18
TMEM260-213ENST00000556929 CX3CL1P78423 397 aa7.7□□□□□ -1.18
TMEM260-213ENST00000556929 TMEM267Q0VDI3 215 aaPredicted RBP7.7□□□□□ -1.18
TMEM260-213ENST00000556929 PJVKQ0ZLH3 352 aa7.7□□□□□ -1.18
TMEM260-213ENST00000556929 IZUMO4Q1ZYL8 232 aa7.7□□□□□ -1.18
TMEM260-213ENST00000556929 MRGPRG-AS1Q2M3A8 158 aa7.7□□□□□ -1.18
TMEM260-213ENST00000556929 IAH1Q2TAA2 248 aaPredicted RBP7.7□□□□□ -1.18
TMEM260-213ENST00000556929 Q6ZRM9 215 aa7.7□□□□□ -1.18
TMEM260-213ENST00000556929 OR5M8Q8NGP6 311 aa7.7□□□□□ -1.18
TMEM260-213ENST00000556929 OR1L8Q8NGR8 309 aa7.7□□□□□ -1.18
TMEM260-213ENST00000556929 OR5B3Q8NH48 314 aa7.7□□□□□ -1.18
TMEM260-213ENST00000556929 OR52E5Q8NH55 327 aa7.7□□□□□ -1.18
TMEM260-213ENST00000556929 OR2T6Q8NHC8 308 aa7.7□□□□□ -1.18
TMEM260-213ENST00000556929 SRSF12Q8WXF0 261 aaKnown RBP7.7□□□□□ -1.18
TMEM260-213ENST00000556929 C2orf50Q96LR7 162 aa7.7□□□□□ -1.18
TMEM260-213ENST00000556929 FYTTD1Q96QD9 318 aaKnown RBP7.7□□□□□ -1.18
TMEM260-213ENST00000556929 HSPB9Q9BQS6 159 aa7.7□□□□□ -1.18
TMEM260-213ENST00000556929 PARP11Q9NR21 331 aa7.7□□□□□ -1.18
TMEM260-213ENST00000556929 TMEM14BQ9NUH8 114 aa7.7□□□□□ -1.18
TMEM260-213ENST00000556929 CUBNO60494 3623 aa7.7□□□□□ -1.18
TMEM260-213ENST00000556929 MAST4O15021 2626 aa7.7□□□□□ -1.18
TMEM260-213ENST00000556929 FN1P02751 2386 aaKnown RBP7.69□□□□□ -1.18
TMEM260-213ENST00000556929 A0A1W2PN81 502 aa7.69□□□□□ -1.18
TMEM260-213ENST00000556929 FAM90A26D6RGX4 464 aa7.69□□□□□ -1.18
TMEM260-213ENST00000556929 AP4M1O00189 453 aa7.69□□□□□ -1.18
TMEM260-213ENST00000556929 ST8SIA3O43173 380 aa7.69□□□□□ -1.18
TMEM260-213ENST00000556929 MED6O75586 246 aa7.69□□□□□ -1.18
TMEM260-213ENST00000556929 TSPAN9O75954 239 aa7.69□□□□□ -1.18
TMEM260-213ENST00000556929 OPN1MWP04001 364 aa7.69□□□□□ -1.18
TMEM260-213ENST00000556929 TRAPPC2P0DI81 140 aa7.69□□□□□ -1.18
TMEM260-213ENST00000556929 TRAPPC2BP0DI82 140 aa7.69□□□□□ -1.18
TMEM260-213ENST00000556929 OPN1MW2P0DN77 364 aa7.69□□□□□ -1.18
TMEM260-213ENST00000556929 OPN1MW3P0DN78 364 aa7.69□□□□□ -1.18
TMEM260-213ENST00000556929 CHRNA7P36544 502 aa7.69□□□□□ -1.18
TMEM260-213ENST00000556929 VDAC2P45880 294 aaPredicted RBP7.69□□□□□ -1.18
TMEM260-213ENST00000556929 CYCSP99999 105 aaKnown RBP7.69□□□□□ -1.18
TMEM260-213ENST00000556929 Q6ZSV7 163 aa7.69□□□□□ -1.18
TMEM260-213ENST00000556929 HSD17B13Q7Z5P4 300 aaPredicted RBP7.69□□□□□ -1.18
TMEM260-213ENST00000556929 MRPL41Q8IXM3 137 aaKnown RBP7.69□□□□□ -1.18
TMEM260-213ENST00000556929 ZBTB8BQ8NAP8 495 aaPredicted RBP7.69□□□□□ -1.18
TMEM260-213ENST00000556929 SGMS2Q8NHU3 365 aa7.69□□□□□ -1.18
TMEM260-213ENST00000556929 GRPEL2Q8TAA5 225 aa7.69□□□□□ -1.18
TMEM260-213ENST00000556929 OR10C1Q96KK4 312 aa7.69□□□□□ -1.18
TMEM260-213ENST00000556929 TMEM68Q96MH6 324 aa7.69□□□□□ -1.18
TMEM260-213ENST00000556929 HINT2Q9BX68 163 aa7.69□□□□□ -1.18
TMEM260-213ENST00000556929 QTRT1Q9BXR0 403 aaKnown RBP7.69□□□□□ -1.18
TMEM260-213ENST00000556929 GON7Q9BXV9 100 aa7.69□□□□□ -1.18
TMEM260-213ENST00000556929 ZNF702PQ9H963 129 aa7.69□□□□□ -1.18
TMEM260-213ENST00000556929 ENY2Q9NPA8 101 aa7.69□□□□□ -1.18
TMEM260-213ENST00000556929 ZFP57Q9NU63 452 aa7.69□□□□□ -1.18
TMEM260-213ENST00000556929 GSKIPQ9P0R6 139 aa7.69□□□□□ -1.18
TMEM260-213ENST00000556929 MSGN1A6NI15 193 aa7.68□□□□□ -1.18
TMEM260-213ENST00000556929 CEBPZOSA8MTT3 80 aa7.68□□□□□ -1.18
TMEM260-213ENST00000556929 MPTX1A8MV57 137 aa7.68□□□□□ -1.18
TMEM260-213ENST00000556929 WRBO00258 174 aa7.68□□□□□ -1.18
TMEM260-213ENST00000556929 ATP6V0E1O15342 81 aa7.68□□□□□ -1.18
TMEM260-213ENST00000556929 PITX3O75364 302 aa7.68□□□□□ -1.18
TMEM260-213ENST00000556929 NDUFA7O95182 113 aa7.68□□□□□ -1.18
TMEM260-213ENST00000556929 SIX6O95475 246 aa7.68□□□□□ -1.18
TMEM260-213ENST00000556929 IGF1P05019 195 aa7.68□□□□□ -1.18
TMEM260-213ENST00000556929 MYOD1P15172 320 aa7.68□□□□□ -1.18
TMEM260-213ENST00000556929 NKX2-1P43699 371 aaPredicted RBP7.68□□□□□ -1.18
TMEM260-213ENST00000556929 SPCS3P61009 180 aa7.68□□□□□ -1.18
TMEM260-213ENST00000556929 SSBP2P81877 361 aaPredicted RBP7.68□□□□□ -1.18
TMEM260-213ENST00000556929 ERHP84090 104 aaKnown RBP7.68□□□□□ -1.18
TMEM260-213ENST00000556929 PRCDQ00LT1 54 aa7.68□□□□□ -1.18
TMEM260-213ENST00000556929 FCN2Q15485 313 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms