RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 TECRQ9NZ01 308 aaKnown RBP17.06■□□□□ 0.32
ACTN1-220ENST00000556433 CEPT1Q9Y6K0 416 aa17.06■□□□□ 0.32
ACTN1-220ENST00000556433 RBFOX2O43251 390 aaKnown RBP eCLIP17.05■□□□□ 0.329e-7■■□□□ 12.5
ACTN1-220ENST00000556433 CATR1Q13166 79 aa17.05■□□□□ 0.32
ACTN1-220ENST00000556433 LINC00322Q6ZN03 302 aaPredicted RBP17.05■□□□□ 0.32
ACTN1-220ENST00000556433 GIMAP1Q8WWP7 306 aa17.05■□□□□ 0.32
ACTN1-220ENST00000556433 CCDC140Q96MF4 163 aa17.05■□□□□ 0.32
ACTN1-220ENST00000556433 ZNF320A2RRD8 509 aa17.04■□□□□ 0.32
ACTN1-220ENST00000556433 CGB1A6NKQ9 187 aa17.04■□□□□ 0.32
ACTN1-220ENST00000556433 HPRT1P00492 218 aa17.04■□□□□ 0.32
ACTN1-220ENST00000556433 CBLN1P23435 193 aa17.04■□□□□ 0.32
ACTN1-220ENST00000556433 CBX5P45973 191 aa17.04■□□□□ 0.32
ACTN1-220ENST00000556433 TAS2R31P59538 309 aa17.04■□□□□ 0.32
ACTN1-220ENST00000556433 KLK9Q2XQG4 91 aa17.04■□□□□ 0.32
ACTN1-220ENST00000556433 FAM106AQ4KMX7 169 aa17.04■□□□□ 0.32
ACTN1-220ENST00000556433 DEFB125Q8N687 156 aa17.04■□□□□ 0.32
ACTN1-220ENST00000556433 OR5AP2Q8NGF4 316 aa17.04■□□□□ 0.32
ACTN1-220ENST00000556433 RETNQ9HD89 108 aa17.04■□□□□ 0.32
ACTN1-220ENST00000556433 KLK9Q9UKQ9 250 aa17.04■□□□□ 0.32
ACTN1-220ENST00000556433 RYR2Q92736 4967 aa17.04■□□□□ 0.32
ACTN1-220ENST00000556433 TRAV3A0A0B4J244 114 aa17.03■□□□□ 0.32
ACTN1-220ENST00000556433 LCE6AA0A183 80 aa17.03■□□□□ 0.32
ACTN1-220ENST00000556433 MEIS3P1A6NDR6 274 aa17.03■□□□□ 0.32
ACTN1-220ENST00000556433 UPK2O00526 184 aa17.03■□□□□ 0.32
ACTN1-220ENST00000556433 NQO2P16083 231 aa17.03■□□□□ 0.32
ACTN1-220ENST00000556433 OR2B8PP59922 312 aa17.03■□□□□ 0.32
ACTN1-220ENST00000556433 WDR89Q96FK6 387 aaPredicted RBP17.03■□□□□ 0.32
ACTN1-220ENST00000556433 HIPK2Q9H2X6 1198 aa17.03■□□□□ 0.32
ACTN1-220ENST00000556433 ZC4H2Q9NQZ6 224 aa17.03■□□□□ 0.32
ACTN1-220ENST00000556433 SELENOKQ9Y6D0 94 aa17.03■□□□□ 0.32
ACTN1-220ENST00000556433 IGLV11-55A0A075B6I3 123 aa17.02■□□□□ 0.32
ACTN1-220ENST00000556433 OR11H12B2RN74 326 aa17.02■□□□□ 0.32
ACTN1-220ENST00000556433 TMEM127O75204 238 aa17.02■□□□□ 0.32
ACTN1-220ENST00000556433 CLEC3BP05452 202 aa17.02■□□□□ 0.32
ACTN1-220ENST00000556433 ZNF818PQ6ZRF7 136 aa17.02■□□□□ 0.32
ACTN1-220ENST00000556433 TMEM17Q86X19 198 aa17.02■□□□□ 0.32
ACTN1-220ENST00000556433 OR51H1Q8NH63 302 aa17.02■□□□□ 0.32
ACTN1-220ENST00000556433 CACNG8Q8WXS5 425 aa17.02■□□□□ 0.32
ACTN1-220ENST00000556433 S100A16Q96FQ6 103 aaKnown RBP17.02■□□□□ 0.32
ACTN1-220ENST00000556433 WFDC10AQ9H1F0 79 aa17.02■□□□□ 0.32
ACTN1-220ENST00000556433 TRBV7-1A0A0A6YYK4 115 aa17.01■□□□□ 0.31
ACTN1-220ENST00000556433 RBMY1BA6NDE4 496 aaKnown RBP17.01■□□□□ 0.31
ACTN1-220ENST00000556433 RBMY1EA6NEQ0 496 aaKnown RBP17.01■□□□□ 0.31
ACTN1-220ENST00000556433 XRCC3O43542 346 aa17.01■□□□□ 0.31
ACTN1-220ENST00000556433 RBMY1DP0C7P1 496 aaKnown RBP17.01■□□□□ 0.31
ACTN1-220ENST00000556433 HERV-K104P61576 105 aa17.01■□□□□ 0.31
ACTN1-220ENST00000556433 POU2AF1Q16633 256 aa17.01■□□□□ 0.31
ACTN1-220ENST00000556433 AADACL3Q5VUY0 350 aa17.01■□□□□ 0.31
ACTN1-220ENST00000556433 CD300LFQ8TDQ1 290 aa17.01■□□□□ 0.31
ACTN1-220ENST00000556433 CXorf58Q96LI9 332 aa17.01■□□□□ 0.31
ACTN1-220ENST00000556433 COMMD5Q9GZQ3 224 aa17.01■□□□□ 0.31
ACTN1-220ENST00000556433 SRD5A3Q9H8P0 318 aa17.01■□□□□ 0.31
ACTN1-220ENST00000556433 IFT46Q9NQC8 304 aa17.01■□□□□ 0.31
ACTN1-220ENST00000556433 SACSQ9NZJ4 4579 aa17.01■□□□□ 0.31
ACTN1-220ENST00000556433 MFSD2BA6NFX1 497 aa17■□□□□ 0.31
ACTN1-220ENST00000556433 KCTD21Q4G0X4 260 aa17■□□□□ 0.31
ACTN1-220ENST00000556433 ZNF57Q68EA5 555 aaPredicted RBP17■□□□□ 0.31
ACTN1-220ENST00000556433 UXS1Q8NBZ7 420 aa17■□□□□ 0.31
ACTN1-220ENST00000556433 DMBX1Q8NFW5 382 aa17■□□□□ 0.31
ACTN1-220ENST00000556433 FAM110AQ9BQ89 295 aa17■□□□□ 0.31
ACTN1-220ENST00000556433 PLEKHA2Q9HB19 425 aa17■□□□□ 0.31
ACTN1-220ENST00000556433 TMEM140Q9NV12 185 aa17■□□□□ 0.31
ACTN1-220ENST00000556433 IGLC7A0M8Q6 106 aa16.99■□□□□ 0.31
ACTN1-220ENST00000556433 TMEM213A2RRL7 107 aa16.99■□□□□ 0.31
ACTN1-220ENST00000556433 S1PR2O95136 353 aa16.99■□□□□ 0.31
ACTN1-220ENST00000556433 RPA2P15927 270 aa16.99■□□□□ 0.31
ACTN1-220ENST00000556433 GNRHRP30968 328 aa16.99■□□□□ 0.31
ACTN1-220ENST00000556433 TGFBR1P36897 503 aa16.99■□□□□ 0.31
ACTN1-220ENST00000556433 CROCCP3Q8IVE0 287 aa16.99■□□□□ 0.31
ACTN1-220ENST00000556433 SRSF8Q9BRL6 282 aaKnown RBP16.99■□□□□ 0.31
ACTN1-220ENST00000556433 EHFQ9NZC4 300 aa16.99■□□□□ 0.31
ACTN1-220ENST00000556433 A8MWP6 167 aa16.98■□□□□ 0.31
ACTN1-220ENST00000556433 RFX2P48378 723 aa16.98■□□□□ 0.31
ACTN1-220ENST00000556433 DHRS11Q6UWP2 260 aa16.98■□□□□ 0.31
ACTN1-220ENST00000556433 SLC16A13Q7RTY0 426 aa16.98■□□□□ 0.31
ACTN1-220ENST00000556433 TMEM61Q8N0U2 210 aa16.98■□□□□ 0.31
ACTN1-220ENST00000556433 BORCS5Q969J3 196 aa16.98■□□□□ 0.31
ACTN1-220ENST00000556433 THYN1Q9P016 225 aa16.98■□□□□ 0.31
ACTN1-220ENST00000556433 MLXQ9UH92 298 aa16.98■□□□□ 0.31
ACTN1-220ENST00000556433 STARD9Q9P2P6 4700 aa16.98■□□□□ 0.31
ACTN1-220ENST00000556433 GPR183P32249 361 aa16.97■□□□□ 0.31
ACTN1-220ENST00000556433 RPS19P39019 145 aaKnown RBP16.97■□□□□ 0.31
ACTN1-220ENST00000556433 TM4SF20Q53R12 229 aa16.97■□□□□ 0.31
ACTN1-220ENST00000556433 UBE2NLQ5JXB2 153 aa16.97■□□□□ 0.31
ACTN1-220ENST00000556433 OR10W1Q8NGF6 305 aa16.97■□□□□ 0.31
ACTN1-220ENST00000556433 ZNF502Q8TBZ5 544 aa16.97■□□□□ 0.31
ACTN1-220ENST00000556433 ZNF2Q9BSG1 426 aaPredicted RBP16.97■□□□□ 0.31
ACTN1-220ENST00000556433 QTRT1Q9BXR0 403 aaKnown RBP16.97■□□□□ 0.31
ACTN1-220ENST00000556433 COMMD9Q9P000 198 aa16.97■□□□□ 0.31
ACTN1-220ENST00000556433 PGLYRP1O75594 196 aaPredicted RBP16.96■□□□□ 0.31
ACTN1-220ENST00000556433 PMP2P02689 132 aa16.96■□□□□ 0.31
ACTN1-220ENST00000556433 TRAPPC2P0DI81 140 aa16.96■□□□□ 0.31
ACTN1-220ENST00000556433 TRAPPC2BP0DI82 140 aa16.96■□□□□ 0.31
ACTN1-220ENST00000556433 PTBP1P26599 531 aaKnown RBP eCLIP16.96■□□□□ 0.311e-7■■■■■ 30.8
ACTN1-220ENST00000556433 TMEM69Q5SWH9 247 aa16.96■□□□□ 0.31
ACTN1-220ENST00000556433 PLET1Q6UQ28 207 aa16.96■□□□□ 0.31
ACTN1-220ENST00000556433 UNQ9165/PRO28630Q6UXU0 137 aa16.96■□□□□ 0.31
ACTN1-220ENST00000556433 SAMD12Q8N8I0 201 aa16.96■□□□□ 0.31
ACTN1-220ENST00000556433 OR52B4Q8NGK2 314 aa16.96■□□□□ 0.31
ACTN1-220ENST00000556433 IGHV3-35A0A0C4DH35 117 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms