RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 CDC34P49427 236 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-241ENST00000556374 RND2P52198 227 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 FGF8P55075 233 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-241ENST00000556374 CLDN18P56856 261 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 CCL20P78556 96 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 TNFRSF9Q07011 255 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 SRSF6Q13247 344 aaKnown RBP3.66□□□□□ -1.82
ATXN3-241ENST00000556374 TMEM241Q24JQ0 296 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 SMIM21Q3B7S5 101 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 BSXQ3C1V8 233 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 PDZD11Q5EBL8 140 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 SPATA46Q5T0L3 261 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 FBXW9Q5XUX1 488 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 FAM90A2PQ658T7 463 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 ZNF324BQ6AW86 544 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-241ENST00000556374 ZNF343Q6P1L6 599 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 ZNF497Q6ZNH5 498 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 LINC00696Q6ZRV3 163 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 H2BFWTQ7Z2G1 175 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 C16orf82Q7Z2V1 217 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 MDP1Q86V88 176 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 TMEM183AQ8IXX5 376 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 HIST3H2BBQ8N257 126 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 TMEM251Q8N6I4 163 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 LINC00469Q8N7U9 141 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 ZNF383Q8NA42 475 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 TMEM178AQ8NBL3 297 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 OR10G9Q8NGN4 311 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 OR10G7Q8NGN6 311 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 OR4F5Q8NH21 305 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 DTD1Q8TEA8 209 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 FAM216AQ8WUB2 273 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 MBD3L1Q8WWY6 194 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 RPUSD4Q96CM3 377 aaKnown RBP3.66□□□□□ -1.82
ATXN3-241ENST00000556374 SNX22Q96L94 193 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 PACRGQ96M98 296 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-241ENST00000556374 ZNF488Q96MN9 340 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 YPEL4Q96NS1 127 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 OR4F4Q96R69 305 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 HSD17B10Q99714 261 aaKnown RBP3.66□□□□□ -1.82
ATXN3-241ENST00000556374 ABHD14AQ9BUJ0 271 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 SCRT1Q9BWW7 348 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 RBKSQ9H477 322 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 SRD5A3Q9H8P0 318 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 ENY2Q9NPA8 101 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 OBP2BQ9NPH6 170 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 RPRMQ9NS64 109 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-241ENST00000556374 DEPPQ9NTK1 212 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 UFSP2Q9NUQ7 469 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 IL36RNQ9UBH0 155 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 ZNF580Q9UK33 172 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 RNF115Q9Y4L5 304 aa3.66□□□□□ -1.82
ATXN3-241ENST00000556374 TNRC6AQ8NDV7 1962 aaKnown RBP3.65□□□□□ -1.82
ATXN3-241ENST00000556374 RP1P56715 2156 aa3.65□□□□□ -1.82
ATXN3-241ENST00000556374 PCNX3Q9H6A9 2034 aa3.65□□□□□ -1.82
ATXN3-241ENST00000556374 TRGV5A0A0B4J1U4 118 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 A0A0G2JRQ6 117 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 A0A1W2PPV4 95 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 XKRY2A2RUG3 117 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 PINLYPA6NC86 204 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 LRRC30A6NM36 301 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-241ENST00000556374 SPINT2O43291 252 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 PPIHO43447 177 aaKnown RBP3.65□□□□□ -1.83
ATXN3-241ENST00000556374 TIMM8AO60220 97 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-241ENST00000556374 HIST1H2BKO60814 126 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 SMPD2O60906 423 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 SS18L1O75177 396 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-241ENST00000556374 VENTXO95231 258 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 CLDN14O95500 239 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 TMEM50AO95807 157 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 IGKV1-5P01602 117 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 IGHV2-70P01814 119 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 GYPAP02724 150 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 HIST1H2BJP06899 126 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 SP1P08047 785 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 PGA5P0DJD9 388 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 RD3LP0DJH9 198 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 HIST1H2BOP23527 126 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 GCH1P30793 250 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 HIST1H2BBP33778 126 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 CEACAM6P40199 344 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 KIR2DS2P43631 304 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 GPR12P47775 334 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 OR3A1P47881 315 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 PAX9P55771 341 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 HIST1H2BDP58876 126 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 SSTP61278 116 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 HIST1H2BCP62807 126 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 ARG2P78540 354 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 Q0VFX4 171 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 ZNF816Q0VGE8 651 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-241ENST00000556374 RAB31Q13636 194 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 HNF4GQ14541 408 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 SLC10A1Q14973 349 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 HIST2H2BEQ16778 126 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 Q3ZCU0 254 aa3.65□□□□□ -1.83
ATXN3-241ENST00000556374 PDLIM3Q53GG5 364 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-241ENST00000556374 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms