RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 CACYBPQ9HB71 228 aaKnown RBP3.03□□□□□ -1.92
PRPF39-209ENST00000556353 MED29Q9NX70 200 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 TMEM216Q9P0N5 145 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 LGALS13Q9UHV8 139 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 RPL36Q9Y3U8 105 aaKnown RBP3.03□□□□□ -1.92
PRPF39-209ENST00000556353 NBEAL2Q6ZNJ1 2754 aa3.03□□□□□ -1.92
PRPF39-209ENST00000556353 TANC2Q9HCD6 1990 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 A0A096LPI6 279 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 IGLV3-32A0A0A0MS00 114 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 KIR2DS1A0A191URI9 304 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 TRAPPC13A5PLN9 417 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 GMNCA6NCL1 334 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 CLDN24A6NM45 220 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 I3L521 148 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 J3QLI3 93 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 UPK1AO00322 258 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 ZNF780AO75290 641 aaPredicted RBP3.02□□□□□ -1.93
PRPF39-209ENST00000556353 ENTPD6O75354 484 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 FOXH1O75593 365 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 GADD45GO95257 159 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 RLN2P04090 185 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 GIPP09681 153 aaPredicted RBP3.02□□□□□ -1.93
PRPF39-209ENST00000556353 CRYGSP22914 178 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 RPL13AP40429 203 aaKnown RBP3.02□□□□□ -1.93
PRPF39-209ENST00000556353 PPICP45877 212 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 RORCP51449 518 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 DLX6P56179 175 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 CAV1Q03135 178 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 KIR2DS1Q14954 304 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 QPRTQ15274 297 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 RSU1Q15404 277 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 TBC1D28Q2M2D7 210 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 OCIAD2Q56VL3 154 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 ZNF678Q5SXM1 525 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 TEX261Q6UWH6 196 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 MOB3BQ86TA1 216 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 COMMD7Q86VX2 200 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 PDZD9Q8IXQ8 264 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 KIR3DL3Q8N743 410 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 ZNF433Q8N7K0 673 aaPredicted RBP3.02□□□□□ -1.93
PRPF39-209ENST00000556353 ARIH2OSQ8N7S6 290 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 OR2M3Q8NG83 312 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 OR2Z1Q8NG97 314 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 OR13G1Q8NGZ3 307 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 OR56B4Q8NH76 319 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 ZFAND1Q8TCF1 268 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 DNAJA3Q96EY1 480 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 MRAP2Q96G30 205 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 MRPL57Q9BQC6 102 aaKnown RBP3.02□□□□□ -1.93
PRPF39-209ENST00000556353 TM2D1Q9BX74 207 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 SRXN1Q9BYN0 137 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 CHST5Q9GZS9 411 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 DSN1Q9H410 356 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 GLIPR2Q9H4G4 154 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 RNF122Q9H9V4 155 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 SLCO1B3Q9NPD5 702 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 ISYNA1Q9NPH2 558 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 MED11Q9P086 117 aa3.02□□□□□ -1.93
PRPF39-209ENST00000556353 RBM7Q9Y580 266 aaKnown RBP3.02□□□□□ -1.93
PRPF39-209ENST00000556353 KMT2CQ8NEZ4 4911 aaKnown RBP3.01□□□□□ -1.93
PRPF39-209ENST00000556353 A0A096LNT2 108 aa3.01□□□□□ -1.93
PRPF39-209ENST00000556353 ZNF816-ZNF321PA0A0X1KG74 233 aa3.01□□□□□ -1.93
PRPF39-209ENST00000556353 A8MWP6 167 aa3.01□□□□□ -1.93
PRPF39-209ENST00000556353 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.01□□□□□ -1.93
PRPF39-209ENST00000556353 DNASE2O00115 360 aaPredicted RBP3.01□□□□□ -1.93
PRPF39-209ENST00000556353 TCF21O43680 179 aa3.01□□□□□ -1.93
PRPF39-209ENST00000556353 SYNGR1O43759 233 aa3.01□□□□□ -1.93
PRPF39-209ENST00000556353 EFNA2O43921 213 aa3.01□□□□□ -1.93
PRPF39-209ENST00000556353 MPZL2O60487 215 aa3.01□□□□□ -1.93
PRPF39-209ENST00000556353 GCM2O75603 506 aaPredicted RBP3.01□□□□□ -1.93
PRPF39-209ENST00000556353 REM1O75628 298 aa3.01□□□□□ -1.93
PRPF39-209ENST00000556353 SCO1O75880 301 aa3.01□□□□□ -1.93
PRPF39-209ENST00000556353 MMP23AO75900 390 aa3.01□□□□□ -1.93
PRPF39-209ENST00000556353 SNAPC5O75971 98 aa3.01□□□□□ -1.93
PRPF39-209ENST00000556353 SHBGP04278 402 aa3.01□□□□□ -1.93
PRPF39-209ENST00000556353 ARG1P05089 322 aa3.01□□□□□ -1.93
PRPF39-209ENST00000556353 SOD3P08294 240 aa3.01□□□□□ -1.93
PRPF39-209ENST00000556353 TACSTD2P09758 323 aa3.01□□□□□ -1.93
PRPF39-209ENST00000556353 CSF3P09919 207 aa3.01□□□□□ -1.93
PRPF39-209ENST00000556353 H2BFMP0C1H6 154 aa3.01□□□□□ -1.93
PRPF39-209ENST00000556353 HTR1DP28221 377 aa3.01□□□□□ -1.93
PRPF39-209ENST00000556353 FGF9P31371 208 aaPredicted RBP3.01□□□□□ -1.93
PRPF39-209ENST00000556353 RBMXP38159 391 aaKnown RBP3.01□□□□□ -1.93
PRPF39-209ENST00000556353 NCBP2P52298 156 aaKnown RBP eCLIP3.01□□□□□ -1.93
PRPF39-209ENST00000556353 LINC00315P59091 139 aa3.01□□□□□ -1.93
PRPF39-209ENST00000556353 RAB5BP61020 215 aa3.01□□□□□ -1.93
PRPF39-209ENST00000556353 SLC35B1P78383 322 aa3.01□□□□□ -1.93
PRPF39-209ENST00000556353 EIF2B1Q14232 305 aaKnown RBP3.01□□□□□ -1.93
PRPF39-209ENST00000556353 GINS1Q14691 196 aa3.01□□□□□ -1.93
PRPF39-209ENST00000556353 CLLU1Q5K131 121 aa3.01□□□□□ -1.93
PRPF39-209ENST00000556353 TMEM78Q5T7P6 136 aa3.01□□□□□ -1.93
PRPF39-209ENST00000556353 ENPP6Q6UWR7 440 aa3.01□□□□□ -1.93
PRPF39-209ENST00000556353 STAC2Q6ZMT1 411 aa3.01□□□□□ -1.93
PRPF39-209ENST00000556353 DNM1P46Q6ZS02 220 aa3.01□□□□□ -1.93
PRPF39-209ENST00000556353 Q6ZSR3 168 aa3.01□□□□□ -1.93
PRPF39-209ENST00000556353 MBOAT2Q6ZWT7 520 aa3.01□□□□□ -1.93
PRPF39-209ENST00000556353 CROCCP2Q86T23 111 aa3.01□□□□□ -1.93
PRPF39-209ENST00000556353 MARCH3Q86UD3 253 aa3.01□□□□□ -1.93
PRPF39-209ENST00000556353 BAP18Q8IXM2 172 aa3.01□□□□□ -1.93
PRPF39-209ENST00000556353 OR2L13Q8N349 312 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms