RNA–Protein interactions for RNA: ENST00000556333.1

RCCD1-205, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-205ENST00000556333 TMEM68Q96MH6 324 aa15.78■□□□□ 0.12
RCCD1-205ENST00000556333 MS4A10Q96PG2 267 aa15.78■□□□□ 0.12
RCCD1-205ENST00000556333 OR4F4Q96R69 305 aa15.78■□□□□ 0.12
RCCD1-205ENST00000556333 SPIN2AQ99865 258 aa15.78■□□□□ 0.12
RCCD1-205ENST00000556333 SPIN2BQ9BPZ2 258 aa15.78■□□□□ 0.12
RCCD1-205ENST00000556333 COMMD5Q9GZQ3 224 aa15.78■□□□□ 0.12
RCCD1-205ENST00000556333 COA4Q9NYJ1 87 aa15.78■□□□□ 0.12
RCCD1-205ENST00000556333 CRYM-AS1A6NIL9 109 aa15.77■□□□□ 0.12
RCCD1-205ENST00000556333 SOX15O60248 233 aa15.77■□□□□ 0.12
RCCD1-205ENST00000556333 B3GALNT1O75752 331 aa15.77■□□□□ 0.12
RCCD1-205ENST00000556333 IGKV1-39P01597 117 aa15.77■□□□□ 0.12
RCCD1-205ENST00000556333 IGKV1D-39P04432 117 aa15.77■□□□□ 0.12
RCCD1-205ENST00000556333 RAB9AP51151 201 aa15.77■□□□□ 0.12
RCCD1-205ENST00000556333 CCR6P51684 374 aa15.77■□□□□ 0.12
RCCD1-205ENST00000556333 AKR1C2P52895 323 aa15.77■□□□□ 0.12
RCCD1-205ENST00000556333 PRR31Q5SQ13 230 aa15.77■□□□□ 0.12
RCCD1-205ENST00000556333 RNASE11Q8TAA1 199 aaKnown RBP15.77■□□□□ 0.12
RCCD1-205ENST00000556333 SLC25A21Q9BQT8 299 aaPredicted RBP15.77■□□□□ 0.12
RCCD1-205ENST00000556333 CCDC32Q9BV29 185 aa15.77■□□□□ 0.12
RCCD1-205ENST00000556333 WDR12Q9GZL7 423 aaKnown RBP15.77■□□□□ 0.12
RCCD1-205ENST00000556333 KLK15Q9H2R5 256 aa15.77■□□□□ 0.12
RCCD1-205ENST00000556333 KCNIP3Q9Y2W7 256 aa15.77■□□□□ 0.12
RCCD1-205ENST00000556333 NSG2Q9Y328 171 aa15.77■□□□□ 0.12
RCCD1-205ENST00000556333 HMX3A6NHT5 357 aa15.76■□□□□ 0.11
RCCD1-205ENST00000556333 ATG12O94817 140 aa15.76■□□□□ 0.11
RCCD1-205ENST00000556333 OR9G9P0C7N8 305 aa15.76■□□□□ 0.11
RCCD1-205ENST00000556333 TPPP2P59282 170 aa15.76■□□□□ 0.11
RCCD1-205ENST00000556333 ZNF846Q147U1 533 aa15.76■□□□□ 0.11
RCCD1-205ENST00000556333 RBMS2Q15434 407 aaKnown RBP15.76■□□□□ 0.11
RCCD1-205ENST00000556333 ASPHD1Q5U4P2 390 aa15.76■□□□□ 0.11
RCCD1-205ENST00000556333 TREML4Q6UXN2 200 aa15.76■□□□□ 0.11
RCCD1-205ENST00000556333 C18orf65Q6ZTR6 163 aa15.76■□□□□ 0.11
RCCD1-205ENST00000556333 ZNF695Q8IW36 515 aa15.76■□□□□ 0.11
RCCD1-205ENST00000556333 SEC22AQ96IW7 307 aa15.76■□□□□ 0.11
RCCD1-205ENST00000556333 TSC22D3Q99576 134 aa15.76■□□□□ 0.11
RCCD1-205ENST00000556333 C7orf50Q9BRJ6 194 aaKnown RBP15.76■□□□□ 0.11
RCCD1-205ENST00000556333 TGP01266 2768 aa15.75■□□□□ 0.11
RCCD1-205ENST00000556333 RBMXL2O75526 392 aaKnown RBP15.75■□□□□ 0.11
RCCD1-205ENST00000556333 PF4P02776 101 aa15.75■□□□□ 0.11
RCCD1-205ENST00000556333 TRGV3P03979 118 aa15.75■□□□□ 0.11
RCCD1-205ENST00000556333 IL6RP08887 468 aaPredicted RBP15.75■□□□□ 0.11
RCCD1-205ENST00000556333 UCP1P25874 307 aa15.75■□□□□ 0.11
RCCD1-205ENST00000556333 OR2B8PP59922 312 aa15.75■□□□□ 0.11
RCCD1-205ENST00000556333 DHODHQ02127 395 aa15.75■□□□□ 0.11
RCCD1-205ENST00000556333 C8orf86Q6ZUL3 223 aa15.75■□□□□ 0.11
RCCD1-205ENST00000556333 RNF152Q8N8N0 203 aa15.75■□□□□ 0.11
RCCD1-205ENST00000556333 OR4A16Q8NH70 328 aa15.75■□□□□ 0.11
RCCD1-205ENST00000556333 TMEM230Q96A57 120 aa15.75■□□□□ 0.11
RCCD1-205ENST00000556333 TMEM222Q9H0R3 208 aa15.75■□□□□ 0.11
RCCD1-205ENST00000556333 E7EUB6 86 aa15.74■□□□□ 0.11
RCCD1-205ENST00000556333 CDX1P47902 265 aaPredicted RBP15.74■□□□□ 0.11
RCCD1-205ENST00000556333 ZNF491Q8N8L2 437 aa15.74■□□□□ 0.11
RCCD1-205ENST00000556333 HINT2Q9BX68 163 aa15.74■□□□□ 0.11
RCCD1-205ENST00000556333 SLA2Q9H6Q3 261 aa15.74■□□□□ 0.11
RCCD1-205ENST00000556333 ANXA3P12429 323 aa15.73■□□□□ 0.11
RCCD1-205ENST00000556333 SLC25A42Q86VD7 318 aa15.73■□□□□ 0.11
RCCD1-205ENST00000556333 CENPSQ8N2Z9 138 aa15.73■□□□□ 0.11
RCCD1-205ENST00000556333 GLYATL2Q8WU03 294 aa15.73■□□□□ 0.11
RCCD1-205ENST00000556333 RRNAD1Q96FB5 475 aaKnown RBP15.73■□□□□ 0.11
RCCD1-205ENST00000556333 UBE2E2Q96LR5 201 aa15.73■□□□□ 0.11
RCCD1-205ENST00000556333 OR5B12Q96R08 314 aa15.73■□□□□ 0.11
RCCD1-205ENST00000556333 FKBP11Q9NYL4 201 aa15.73■□□□□ 0.11
RCCD1-205ENST00000556333 PRNDQ9UKY0 176 aa15.73■□□□□ 0.11
RCCD1-205ENST00000556333 OR51B2Q9Y5P1 312 aa15.73■□□□□ 0.11
RCCD1-205ENST00000556333 TEX22C9J3V5 150 aa15.72■□□□□ 0.11
RCCD1-205ENST00000556333 H3BUA1 57 aa15.72■□□□□ 0.11
RCCD1-205ENST00000556333 LYRM1O43325 122 aa15.72■□□□□ 0.11
RCCD1-205ENST00000556333 FGF2P09038 288 aa15.72■□□□□ 0.11
RCCD1-205ENST00000556333 TMEM268Q5VZI3 342 aa15.72■□□□□ 0.11
RCCD1-205ENST00000556333 CADM3Q8N126 398 aa15.72■□□□□ 0.11
RCCD1-205ENST00000556333 OR1L8Q8NGR8 309 aa15.72■□□□□ 0.11
RCCD1-205ENST00000556333 RBPMSQ93062 196 aaKnown RBP15.72■□□□□ 0.11
RCCD1-205ENST00000556333 QTRT1Q9BXR0 403 aaKnown RBP15.72■□□□□ 0.11
RCCD1-205ENST00000556333 PRR13Q9NZ81 148 aa15.72■□□□□ 0.11
RCCD1-205ENST00000556333 PKD1L1Q8TDX9 2849 aa15.72■□□□□ 0.11
RCCD1-205ENST00000556333 TEX50A0A1B0GTY4 177 aa15.71■□□□□ 0.11
RCCD1-205ENST00000556333 A0A1B0GW64 132 aa15.71■□□□□ 0.11
RCCD1-205ENST00000556333 C15orf61A6NNL5 157 aa15.71■□□□□ 0.11
RCCD1-205ENST00000556333 PLA2G10O15496 165 aa15.71■□□□□ 0.11
RCCD1-205ENST00000556333 NDUFB6O95139 128 aa15.71■□□□□ 0.11
RCCD1-205ENST00000556333 CDS2O95674 445 aa15.71■□□□□ 0.11
RCCD1-205ENST00000556333 IGKV1-5P01602 117 aa15.71■□□□□ 0.11
RCCD1-205ENST00000556333 REG1AP05451 166 aa15.71■□□□□ 0.11
RCCD1-205ENST00000556333 TRAPPC2P0DI81 140 aa15.71■□□□□ 0.11
RCCD1-205ENST00000556333 TRAPPC2BP0DI82 140 aa15.71■□□□□ 0.11
RCCD1-205ENST00000556333 VAMP1P23763 118 aa15.71■□□□□ 0.11
RCCD1-205ENST00000556333 SLC6A1P30531 599 aa15.71■□□□□ 0.11
RCCD1-205ENST00000556333 IZUMO4Q1ZYL8 232 aa15.71■□□□□ 0.11
RCCD1-205ENST00000556333 DEFB136Q30KP8 78 aa15.71■□□□□ 0.11
RCCD1-205ENST00000556333 TMEM128Q5BJH2 165 aa15.71■□□□□ 0.11
RCCD1-205ENST00000556333 SELENOHQ8IZQ5 122 aaKnown RBP15.71■□□□□ 0.11
RCCD1-205ENST00000556333 TTC9CQ8N5M4 171 aa15.71■□□□□ 0.11
RCCD1-205ENST00000556333 MYOZ3Q8TDC0 251 aa15.71■□□□□ 0.11
RCCD1-205ENST00000556333 C4orf3Q8WVX3 66 aa15.71■□□□□ 0.11
RCCD1-205ENST00000556333 GALNT14Q96FL9 552 aa15.71■□□□□ 0.11
RCCD1-205ENST00000556333 DUX3Q96PT4 197 aa15.71■□□□□ 0.11
RCCD1-205ENST00000556333 GNB4Q9HAV0 340 aa15.71■□□□□ 0.11
RCCD1-205ENST00000556333 C13orf42A0A1B0GVH6 325 aa15.7■□□□□ 0.1
RCCD1-205ENST00000556333 CGB1A6NKQ9 187 aa15.7■□□□□ 0.1
RCCD1-205ENST00000556333 IGHV3-11P01762 117 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms