RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 TRAV1-2A0A0B4J238 106 aa5.01□□□□□ -1.61
ATXN3-236ENST00000556220 FOXI3A8MTJ6 420 aaPredicted RBP5.01□□□□□ -1.61
ATXN3-236ENST00000556220 FAM90A23PA8MXZ1 464 aa5.01□□□□□ -1.61
ATXN3-236ENST00000556220 MCRIP1C9JLW8 97 aa5.01□□□□□ -1.61
ATXN3-236ENST00000556220 C11orf94C9JXX5 98 aa5.01□□□□□ -1.61
ATXN3-236ENST00000556220 H7C2Y5 167 aa5.01□□□□□ -1.61
ATXN3-236ENST00000556220 LGALS9O00182 355 aa5.01□□□□□ -1.61
ATXN3-236ENST00000556220 RAB29O14966 203 aa5.01□□□□□ -1.61
ATXN3-236ENST00000556220 PLA2G10O15496 165 aa5.01□□□□□ -1.61
ATXN3-236ENST00000556220 GALP22466 123 aa5.01□□□□□ -1.61
ATXN3-236ENST00000556220 ATP6V1E1P36543 226 aa5.01□□□□□ -1.61
ATXN3-236ENST00000556220 GBX2P52951 348 aaPredicted RBP5.01□□□□□ -1.61
ATXN3-236ENST00000556220 ATP5G2Q06055 141 aa5.01□□□□□ -1.61
ATXN3-236ENST00000556220 UNC119Q13432 240 aa5.01□□□□□ -1.61
ATXN3-236ENST00000556220 Q499Y3 187 aa5.01□□□□□ -1.61
ATXN3-236ENST00000556220 RPL39P5Q59GN2 51 aa5.01□□□□□ -1.61
ATXN3-236ENST00000556220 HES5Q5TA89 166 aa5.01□□□□□ -1.61
ATXN3-236ENST00000556220 OR10K2Q6IF99 312 aa5.01□□□□□ -1.61
ATXN3-236ENST00000556220 SFXN4Q6P4A7 337 aa5.01□□□□□ -1.61
ATXN3-236ENST00000556220 TMPRSS11AQ6ZMR5 421 aa5.01□□□□□ -1.61
ATXN3-236ENST00000556220 C5orf24Q7Z6I8 188 aa5.01□□□□□ -1.61
ATXN3-236ENST00000556220 PARP16Q8N5Y8 322 aa5.01□□□□□ -1.61
ATXN3-236ENST00000556220 POM121L12Q8N7R1 296 aa5.01□□□□□ -1.61
ATXN3-236ENST00000556220 OR2AK2Q8NG84 335 aa5.01□□□□□ -1.61
ATXN3-236ENST00000556220 OR5AK2Q8NH90 309 aa5.01□□□□□ -1.61
ATXN3-236ENST00000556220 MCFD2Q8NI22 146 aa5.01□□□□□ -1.61
ATXN3-236ENST00000556220 KCNG3Q8TAE7 436 aa5.01□□□□□ -1.61
ATXN3-236ENST00000556220 LGALS14Q8TCE9 139 aa5.01□□□□□ -1.61
ATXN3-236ENST00000556220 ABHD1Q96SE0 405 aa5.01□□□□□ -1.61
ATXN3-236ENST00000556220 TSC22D3Q99576 134 aa5.01□□□□□ -1.61
ATXN3-236ENST00000556220 TSNAXQ99598 290 aaKnown RBP5.01□□□□□ -1.61
ATXN3-236ENST00000556220 RARRES2Q99969 163 aa5.01□□□□□ -1.61
ATXN3-236ENST00000556220 SRRQ9GZT4 340 aa5.01□□□□□ -1.61
ATXN3-236ENST00000556220 IFI27L2Q9H2X8 130 aa5.01□□□□□ -1.61
ATXN3-236ENST00000556220 C11orf68Q9H3H3 251 aaKnown RBP5.01□□□□□ -1.61
ATXN3-236ENST00000556220 SPACA1Q9HBV2 294 aa5.01□□□□□ -1.61
ATXN3-236ENST00000556220 COA4Q9NYJ1 87 aa5.01□□□□□ -1.61
ATXN3-236ENST00000556220 KCNIP1Q9NZI2 227 aa5.01□□□□□ -1.61
ATXN3-236ENST00000556220 MLXQ9UH92 298 aa5.01□□□□□ -1.61
ATXN3-236ENST00000556220 ZNF230Q9UIE0 474 aaPredicted RBP5.01□□□□□ -1.61
ATXN3-236ENST00000556220 VPS13BQ7Z7G8 4022 aa5□□□□□ -1.61
ATXN3-236ENST00000556220 TRAV25A0A0B4J276 109 aa5□□□□□ -1.61
ATXN3-236ENST00000556220 A0A0B4J293 547 aa5□□□□□ -1.61
ATXN3-236ENST00000556220 TMEM212A6NML5 194 aa5□□□□□ -1.61
ATXN3-236ENST00000556220 C16orf90A8MZG2 172 aa5□□□□□ -1.61
ATXN3-236ENST00000556220 GGCTO75223 188 aaKnown RBP5□□□□□ -1.61
ATXN3-236ENST00000556220 CA11O75493 328 aa5□□□□□ -1.61
ATXN3-236ENST00000556220 OR2C1O95371 312 aa5□□□□□ -1.61
ATXN3-236ENST00000556220 HLA-AP01891 365 aaKnown RBP5□□□□□ -1.61
ATXN3-236ENST00000556220 IGKV1-16P04430 117 aa5□□□□□ -1.61
ATXN3-236ENST00000556220 SRMP19623 302 aa5□□□□□ -1.61
ATXN3-236ENST00000556220 RAB3AP20336 220 aa5□□□□□ -1.61
ATXN3-236ENST00000556220 PSMA1P25786 263 aaKnown RBP5□□□□□ -1.61
ATXN3-236ENST00000556220 FCGR2BP31994 310 aaPredicted RBP5□□□□□ -1.61
ATXN3-236ENST00000556220 BTCP35070 178 aa5□□□□□ -1.61
ATXN3-236ENST00000556220 RFX2P48378 723 aa5□□□□□ -1.61
ATXN3-236ENST00000556220 TAS2R43P59537 309 aa5□□□□□ -1.61
ATXN3-236ENST00000556220 RHOGP84095 191 aa5□□□□□ -1.61
ATXN3-236ENST00000556220 PJVKQ0ZLH3 352 aa5□□□□□ -1.61
ATXN3-236ENST00000556220 EXOSC2Q13868 293 aaKnown RBP5□□□□□ -1.61
ATXN3-236ENST00000556220 YIF1BQ5BJH7 314 aa5□□□□□ -1.61
ATXN3-236ENST00000556220 C1orf100Q5SVJ3 147 aa5□□□□□ -1.61
ATXN3-236ENST00000556220 ZNF554Q86TJ5 538 aa5□□□□□ -1.61
ATXN3-236ENST00000556220 GPHB5Q86YW7 130 aa5□□□□□ -1.61
ATXN3-236ENST00000556220 SLC38A6Q8IZM9 456 aa5□□□□□ -1.61
ATXN3-236ENST00000556220 OR2C3Q8N628 320 aa5□□□□□ -1.61
ATXN3-236ENST00000556220 UXS1Q8NBZ7 420 aa5□□□□□ -1.61
ATXN3-236ENST00000556220 ADAD2Q8NCV1 583 aaKnown RBP5□□□□□ -1.61
ATXN3-236ENST00000556220 OR1L6Q8NGR2 347 aa5□□□□□ -1.61
ATXN3-236ENST00000556220 CACNG8Q8WXS5 425 aa5□□□□□ -1.61
ATXN3-236ENST00000556220 SULT4A1Q9BR01 284 aa5□□□□□ -1.61
ATXN3-236ENST00000556220 MAP6D1Q9H9H5 199 aa5□□□□□ -1.61
ATXN3-236ENST00000556220 SSR3Q9UNL2 185 aa5□□□□□ -1.61
ATXN3-236ENST00000556220 IGHV4-4A0A075B6R2 117 aa4.99□□□□□ -1.61
ATXN3-236ENST00000556220 TRBV9A0A0B4J1U6 114 aa4.99□□□□□ -1.61
ATXN3-236ENST00000556220 TMEM272A0A1B0GTI8 110 aa4.99□□□□□ -1.61
ATXN3-236ENST00000556220 TMEM213A2RRL7 107 aa4.99□□□□□ -1.61
ATXN3-236ENST00000556220 FAM223BA6NKX1 122 aa4.99□□□□□ -1.61
ATXN3-236ENST00000556220 SNTNA6NMZ2 147 aa4.99□□□□□ -1.61
ATXN3-236ENST00000556220 IFITM5A6NNB3 132 aa4.99□□□□□ -1.61
ATXN3-236ENST00000556220 PPP5D1E7EU14 171 aa4.99□□□□□ -1.61
ATXN3-236ENST00000556220 ZNF780AO75290 641 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-236ENST00000556220 HLA-DQB1P01920 261 aa4.99□□□□□ -1.61
ATXN3-236ENST00000556220 MAS1P04201 325 aa4.99□□□□□ -1.61
ATXN3-236ENST00000556220 CRYGBP07316 175 aa4.99□□□□□ -1.61
ATXN3-236ENST00000556220 GTF2F2P13984 249 aa4.99□□□□□ -1.61
ATXN3-236ENST00000556220 RPL35AP18077 110 aaKnown RBP4.99□□□□□ -1.61
ATXN3-236ENST00000556220 SERPINA2P20848 420 aa4.99□□□□□ -1.61
ATXN3-236ENST00000556220 CD300CQ08708 224 aa4.99□□□□□ -1.61
ATXN3-236ENST00000556220 FAM106AQ4KMX7 169 aa4.99□□□□□ -1.61
ATXN3-236ENST00000556220 FAM209BQ5JX69 171 aa4.99□□□□□ -1.61
ATXN3-236ENST00000556220 PVRIGQ6DKI7 326 aa4.99□□□□□ -1.61
ATXN3-236ENST00000556220 SIGIRRQ6IA17 410 aa4.99□□□□□ -1.61
ATXN3-236ENST00000556220 CNIH2Q6PI25 160 aa4.99□□□□□ -1.61
ATXN3-236ENST00000556220 RBPMS2Q6ZRY4 209 aaKnown RBP4.99□□□□□ -1.61
ATXN3-236ENST00000556220 FAM223AQ8IWN6 122 aa4.99□□□□□ -1.61
ATXN3-236ENST00000556220 GALMQ96C23 342 aa4.99□□□□□ -1.61
ATXN3-236ENST00000556220 GALNT14Q96FL9 552 aa4.99□□□□□ -1.61
ATXN3-236ENST00000556220 S100A13Q99584 98 aa4.99□□□□□ -1.61
ATXN3-236ENST00000556220 CSTL1Q9H114 145 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms