RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 PCGF1Q9BSM1 259 aa12.36□□□□□ -0.43
NEK9-209ENST00000556170 GAL3ST2Q9H3Q3 398 aa12.36□□□□□ -0.43
NEK9-209ENST00000556170 JPT1Q9UK76 154 aa12.36□□□□□ -0.43
NEK9-209ENST00000556170 RNF115Q9Y4L5 304 aa12.36□□□□□ -0.43
NEK9-209ENST00000556170 CCL3L1P16619 93 aa12.36□□□□□ -0.43
NEK9-209ENST00000556170 SRSF7Q16629 238 aaKnown RBP eCLIP12.36□□□□□ -0.43
NEK9-209ENST00000556170 DPPA3Q6W0C5 159 aa12.36□□□□□ -0.43
NEK9-209ENST00000556170 NOL4LQ96MY1 436 aaPredicted RBP12.36□□□□□ -0.43
NEK9-209ENST00000556170 RNF24Q9Y225 148 aa12.36□□□□□ -0.43
NEK9-209ENST00000556170 IGHG3P01860 377 aa12.36□□□□□ -0.43
NEK9-209ENST00000556170 MYOD1P15172 320 aa12.36□□□□□ -0.43
NEK9-209ENST00000556170 GATA2P23769 480 aaPredicted RBP12.36□□□□□ -0.43
NEK9-209ENST00000556170 TCL1AP56279 114 aa12.36□□□□□ -0.43
NEK9-209ENST00000556170 TEPPQ6URK8 271 aa12.36□□□□□ -0.43
NEK9-209ENST00000556170 OR10A7Q8NGE5 316 aa12.36□□□□□ -0.43
NEK9-209ENST00000556170 OR2T10Q8NGZ9 312 aa12.36□□□□□ -0.43
NEK9-209ENST00000556170 FAM122AQ96E09 287 aa12.36□□□□□ -0.43
NEK9-209ENST00000556170 ASCL3Q9NQ33 180 aa12.36□□□□□ -0.43
NEK9-209ENST00000556170 ZNRD1Q9P1U0 126 aa12.36□□□□□ -0.43
NEK9-209ENST00000556170 PPIAL4EA0A075B759 164 aa12.35□□□□□ -0.43
NEK9-209ENST00000556170 PPIAL4DF5H284 164 aa12.35□□□□□ -0.43
NEK9-209ENST00000556170 PLAUP00749 431 aa12.35□□□□□ -0.43
NEK9-209ENST00000556170 FAM87AP0C7U9 286 aa12.35□□□□□ -0.43
NEK9-209ENST00000556170 PPIAL4FP0DN26 164 aa12.35□□□□□ -0.43
NEK9-209ENST00000556170 CHRNB4P30926 498 aa12.35□□□□□ -0.43
NEK9-209ENST00000556170 RHOBP62745 196 aa12.35□□□□□ -0.43
NEK9-209ENST00000556170 BAGE3Q86Y29 109 aa12.35□□□□□ -0.43
NEK9-209ENST00000556170 BAGE2Q86Y30 109 aa12.35□□□□□ -0.43
NEK9-209ENST00000556170 PSMG3Q9BT73 122 aaPredicted RBP12.35□□□□□ -0.43
NEK9-209ENST00000556170 NPVFQ9HCQ7 196 aa12.35□□□□□ -0.43
NEK9-209ENST00000556170 PPIAL4AQ9Y536 164 aa12.35□□□□□ -0.43
NEK9-209ENST00000556170 HOXA5P20719 270 aa12.35□□□□□ -0.43
NEK9-209ENST00000556170 SNRNP40Q96DI7 357 aaKnown RBP12.35□□□□□ -0.43
NEK9-209ENST00000556170 CISD1Q9NZ45 108 aaKnown RBP12.35□□□□□ -0.43
NEK9-209ENST00000556170 IGKV1D-17A0A075B6S4 117 aa12.35□□□□□ -0.43
NEK9-209ENST00000556170 PGPEP1LA6NFU8 196 aa12.35□□□□□ -0.43
NEK9-209ENST00000556170 RRHO14718 337 aa12.35□□□□□ -0.43
NEK9-209ENST00000556170 ARL14EPLP0DKL9 152 aa12.35□□□□□ -0.43
NEK9-209ENST00000556170 ORM2P19652 201 aa12.35□□□□□ -0.43
NEK9-209ENST00000556170 DUTP33316 252 aaKnown RBP12.35□□□□□ -0.43
NEK9-209ENST00000556170 TIGITQ495A1 244 aa12.35□□□□□ -0.43
NEK9-209ENST00000556170 Q8NFD4 153 aa12.35□□□□□ -0.43
NEK9-209ENST00000556170 MBNL3Q9NUK0 354 aaKnown RBP12.35□□□□□ -0.43
NEK9-209ENST00000556170 SLC25A15Q9Y619 301 aa12.35□□□□□ -0.43
NEK9-209ENST00000556170 FRYQ5TBA9 3013 aa12.34□□□□□ -0.43
NEK9-209ENST00000556170 ERVK11-1P61568 191 aa12.34□□□□□ -0.43
NEK9-209ENST00000556170 SLC35B1P78383 322 aa12.34□□□□□ -0.43
NEK9-209ENST00000556170 DUX4L9Q6RFH8 374 aaPredicted RBP12.34□□□□□ -0.43
NEK9-209ENST00000556170 DMRTC2Q8IXT2 367 aaPredicted RBP12.34□□□□□ -0.43
NEK9-209ENST00000556170 WFIKKN1Q96NZ8 548 aa12.34□□□□□ -0.43
NEK9-209ENST00000556170 TRBV6-6A0A0A6YYG2 114 aa12.34□□□□□ -0.43
NEK9-209ENST00000556170 CORO2AQ92828 525 aa12.34□□□□□ -0.43
NEK9-209ENST00000556170 MANBALQ9NQG1 85 aa12.34□□□□□ -0.43
NEK9-209ENST00000556170 FAM208BQ5VWN6 2430 aa12.34□□□□□ -0.43
NEK9-209ENST00000556170 C1QTNF9BB2RNN3 333 aa12.34□□□□□ -0.43
NEK9-209ENST00000556170 SRRM5B3KS81 715 aa12.34□□□□□ -0.43
NEK9-209ENST00000556170 K7EM74 188 aa12.34□□□□□ -0.43
NEK9-209ENST00000556170 COX7A2P2O60397 106 aa12.34□□□□□ -0.43
NEK9-209ENST00000556170 CXCL1P09341 107 aa12.34□□□□□ -0.43
NEK9-209ENST00000556170 C11orf42Q8N5U0 333 aa12.34□□□□□ -0.43
NEK9-209ENST00000556170 FLYWCH2Q96CP2 140 aaKnown RBP12.34□□□□□ -0.43
NEK9-209ENST00000556170 MS4A5Q9H3V2 200 aa12.34□□□□□ -0.43
NEK9-209ENST00000556170 HSPB7Q9UBY9 170 aa12.34□□□□□ -0.43
NEK9-209ENST00000556170 B4DEV8 164 aa12.33□□□□□ -0.44
NEK9-209ENST00000556170 OR10J1P30954 320 aa12.33□□□□□ -0.44
NEK9-209ENST00000556170 ATP5G3P48201 142 aa12.33□□□□□ -0.44
NEK9-209ENST00000556170 HSPE1P61604 102 aaKnown RBP12.33□□□□□ -0.44
NEK9-209ENST00000556170 FAM90A1Q86YD7 464 aa12.33□□□□□ -0.44
NEK9-209ENST00000556170 TRAPPC1Q9Y5R8 145 aa12.33□□□□□ -0.44
NEK9-209ENST00000556170 ACACBO00763 2458 aa12.33□□□□□ -0.44
NEK9-209ENST00000556170 REG1AP05451 166 aa12.33□□□□□ -0.44
NEK9-209ENST00000556170 TRGC1P0CF51 173 aa12.33□□□□□ -0.44
NEK9-209ENST00000556170 BSPH1Q075Z2 132 aa12.33□□□□□ -0.44
NEK9-209ENST00000556170 KRTCAP3Q53RY4 240 aa12.33□□□□□ -0.44
NEK9-209ENST00000556170 HCP5Q6MZN7 132 aa12.33□□□□□ -0.44
NEK9-209ENST00000556170 BLNKQ8WV28 456 aa12.33□□□□□ -0.44
NEK9-209ENST00000556170 SAA2-SAA4A0A096LPE2 208 aa12.33□□□□□ -0.44
NEK9-209ENST00000556170 TNFSF13O75888 250 aa12.33□□□□□ -0.44
NEK9-209ENST00000556170 CA2P00918 260 aa12.33□□□□□ -0.44
NEK9-209ENST00000556170 SAA2P0DJI9 122 aaPredicted RBP12.33□□□□□ -0.44
NEK9-209ENST00000556170 SUMO1P63165 101 aaKnown RBP12.33□□□□□ -0.44
NEK9-209ENST00000556170 OR4A47Q6IF82 309 aa12.33□□□□□ -0.44
NEK9-209ENST00000556170 TGIF2LYQ8IUE0 185 aa12.33□□□□□ -0.44
NEK9-209ENST00000556170 SGMS2Q8NHU3 365 aa12.33□□□□□ -0.44
NEK9-209ENST00000556170 ADTRPQ96IZ2 230 aa12.33□□□□□ -0.44
NEK9-209ENST00000556170 SUB1P53999 127 aaKnown RBP eCLIP12.32□□□□□ -0.44
NEK9-209ENST00000556170 CD81P60033 236 aa12.32□□□□□ -0.44
NEK9-209ENST00000556170 MAJINQ3KP22 176 aa12.32□□□□□ -0.44
NEK9-209ENST00000556170 MS4A10Q96PG2 267 aa12.32□□□□□ -0.44
NEK9-209ENST00000556170 CEACAM1P13688 526 aa12.32□□□□□ -0.44
NEK9-209ENST00000556170 KIR2DS2P43631 304 aa12.32□□□□□ -0.44
NEK9-209ENST00000556170 ONECUT1Q9UBC0 465 aa12.32□□□□□ -0.44
NEK9-209ENST00000556170 MGAQ8IWI9 3026 aa12.32□□□□□ -0.44
NEK9-209ENST00000556170 KBTBD11-OT1A0A1B0GTJ5 212 aa12.32□□□□□ -0.44
NEK9-209ENST00000556170 IL3RAP26951 378 aa12.32□□□□□ -0.44
NEK9-209ENST00000556170 TAS2R45P59539 299 aa12.32□□□□□ -0.44
NEK9-209ENST00000556170 TNXAQ16473 311 aa12.32□□□□□ -0.44
NEK9-209ENST00000556170 GFI1BQ5VTD9 330 aa12.32□□□□□ -0.44
NEK9-209ENST00000556170 LINC01560Q8TB33 94 aa12.32□□□□□ -0.44
NEK9-209ENST00000556170 ZNF714Q96N38 554 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms